FFCP PHASE1:Hg19::chr4:103476893..103476920,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:103476893..103476920,+ | |||
|coexpression_cluster_id=C621 | |||
|description=CAGE_peak_at_chr4:103476893..103476920,+ | |description=CAGE_peak_at_chr4:103476893..103476920,+ | ||
|id=chr4:103476893..103476920,+ | |id=chr4:103476893..103476920,+ | ||
|ontology_enrichment_celltype=CL:0000738!2.98e-35!140;CL:0002057!7.09e-29!42;CL:0000037!1.56e-28!172;CL:0000566!1.56e-28!172;CL:0002087!5.82e-27!119;CL:0000988!1.68e-26!182;CL:0002032!2.89e-26!165;CL:0000837!2.89e-26!165;CL:0000860!3.49e-26!45;CL:0002031!4.40e-25!124;CL:0000766!1.41e-22!76;CL:0002009!1.25e-20!65;CL:0000557!2.54e-20!71;CL:0000763!3.87e-19!112;CL:0000049!3.87e-19!112;CL:0002194!7.01e-19!63;CL:0000576!7.01e-19!63;CL:0000040!7.01e-19!63;CL:0000559!7.01e-19!63;CL:0000839!3.43e-18!70;CL:0000134!3.21e-08!358;CL:0002320!1.17e-07!365;CL:0000542!5.47e-07!53;CL:0000051!5.47e-07!53;CL:0000451!6.73e-07!10 | |ontology_enrichment_celltype=CL:0000738!2.98e-35!140;CL:0002057!7.09e-29!42;CL:0000037!1.56e-28!172;CL:0000566!1.56e-28!172;CL:0002087!5.82e-27!119;CL:0000988!1.68e-26!182;CL:0002032!2.89e-26!165;CL:0000837!2.89e-26!165;CL:0000860!3.49e-26!45;CL:0002031!4.40e-25!124;CL:0000766!1.41e-22!76;CL:0002009!1.25e-20!65;CL:0000557!2.54e-20!71;CL:0000763!3.87e-19!112;CL:0000049!3.87e-19!112;CL:0002194!7.01e-19!63;CL:0000576!7.01e-19!63;CL:0000040!7.01e-19!63;CL:0000559!7.01e-19!63;CL:0000839!3.43e-18!70;CL:0000134!3.21e-08!358;CL:0002320!1.17e-07!365;CL:0000542!5.47e-07!53;CL:0000051!5.47e-07!53;CL:0000451!6.73e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.61e-21;33!CL:0002057;4.61e-21;33!CL:0000623;1.30e-18;3!CL:0000624;4.42e-16;6!CL:0000791;2.06e-15;18!CL:0000789;2.06e-15;18!CL:0002419;2.06e-15;18!CL:0000576;2.86e-15;48!CL:0002087;5.27e-15;104!CL:0000473;5.87e-15;39!CL:0000234;5.87e-15;39!CL:0000084;5.21e-14;25!CL:0000542;5.19e-12;53!CL:0000738;9.37e-11;136!CL:0000766;1.22e-10;69!CL:0002393;6.35e-10;6!CL:0002397;6.35e-10;6!CL:0000775;3.47e-09;3!CL:0000763;9.02e-08;100!CL:0000988;1.77e-07;177!CL:0000094;2.08e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,8.32e-39,136;CL:0002087,1.77e-37,115;CL:0002031,1.06e-35,120;CL:0002032,3.13e-34,161;CL:0000837,3.13e-34,161;CL:0000037,1.41e-32,168;CL:0000988,1.22e-30,177;CL:0000860,1.02e-28,42;CL:0002057,1.02e-28,42;CL:0000473,9.70e-25,48;CL:0000234,9.70e-25,48;CL:0000766,1.06e-22,72;CL:0000838,2.42e-19,52;CL:0002194,3.62e-19,59;CL:0000576,3.62e-19,59;CL:0000040,3.62e-19,59;CL:0000559,3.62e-19,59;CL:0000542,6.36e-19,53;CL:0000051,6.36e-19,53;CL:0000623,1.09e-18,3;CL:0000825,1.09e-18,3;CL:0002009,1.89e-18,61;CL:0000839,7.69e-17,66;CL:0000557,1.51e-16,67;CL:0000624,5.48e-16,6;CL:0000763,1.08e-15,108;CL:0000049,1.08e-15,108;CL:0000791,2.49e-15,18;CL:0000789,2.49e-15,18;CL:0002420,2.49e-15,18;CL:0002419,2.49e-15,18;CL:0000790,2.49e-15,18;CL:0000084,6.64e-14,25;CL:0000827,6.64e-14,25;CL:0000134,1.60e-13,354;CL:0002320,3.81e-13,361;CL:0000219,8.20e-12,386;CL:0000048,3.52e-10,427;CL:0000723,5.91e-10,433;CL:0000034,1.16e-09,441;CL:0000775,3.08e-09,3;CL:0000094,1.80e-07,8;CL:0002393,9.43e-07,9;CL:0002397,9.43e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;8.42e-19;42!CL:0000790;2.06e-15;18!CL:0000051;5.19e-12;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.95e-17!102;UBERON:0003061!2.95e-17!102;UBERON:0002371!1.18e-16!80;UBERON:0002193!2.87e-16!112;UBERON:0001474!1.17e-14!86;UBERON:0004765!2.46e-12!101;UBERON:0001434!2.46e-12!101;UBERON:0002405!3.08e-12!115;UBERON:0002384!2.88e-07!375 | |ontology_enrichment_uberon=UBERON:0002390!2.95e-17!102;UBERON:0003061!2.95e-17!102;UBERON:0002371!1.18e-16!80;UBERON:0002193!2.87e-16!112;UBERON:0001474!1.17e-14!86;UBERON:0004765!2.46e-12!101;UBERON:0001434!2.46e-12!101;UBERON:0002405!3.08e-12!115;UBERON:0002384!2.88e-07!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.99e-14,76;UBERON:0001474,5.35e-13,82;UBERON:0002384,1.25e-12,371;UBERON:0004765,1.38e-11,90;UBERON:0002405,4.05e-11,93;UBERON:0002390,2.10e-10,98;UBERON:0003061,2.10e-10,98;UBERON:0001434,3.88e-10,100;UBERON:0002193,3.58e-09,108 | |||
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|short_description=p@chr4:103476893..103476920,+ | |short_description=p@chr4:103476893..103476920,+ | ||
}} | }} |
Latest revision as of 00:30, 30 July 2015
Short description: | p@chr4:103476893..103476920, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:103476893..103476920, + |
Coexpression cluster: | C621_Neutrophils_CD14_CD4_CD8_Natural_CD19_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.99e-14 | 76 |
bone element | 5.35e-13 | 82 |
connective tissue | 1.25e-12 | 371 |
skeletal element | 1.38e-11 | 90 |
immune system | 4.05e-11 | 93 |
hematopoietic system | 2.10e-10 | 98 |
blood island | 2.10e-10 | 98 |
skeletal system | 3.88e-10 | 100 |
hemolymphoid system | 3.58e-09 | 108 |