FFCP PHASE1:Hg19::chr5:148651758..148651769,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:148651758..148651769,- | |||
|description=CAGE_peak_at_chr5:148651758..148651769,- | |description=CAGE_peak_at_chr5:148651758..148651769,- | ||
|id=chr5:148651758..148651769,- | |id=chr5:148651758..148651769,- | ||
|ontology_enrichment_celltype=CL:0000066!2.84e-25!254;CL:0002139!5.53e-20!24;CL:0000115!1.30e-18!35;CL:0002078!1.23e-17!44;CL:0000076!1.34e-13!62;CL:0000213!1.44e-12!57;CL:0000215!1.44e-12!57;CL:0000071!2.55e-12!18;CL:0002546!2.55e-12!18;CL:0000220!1.44e-10!246;CL:0002321!2.46e-10!248;CL:0005020!5.52e-10!6;CL:0002138!5.52e-10!6;CL:0005022!5.52e-10!6;CL:0002681!2.27e-08!13;CL:0002584!2.27e-08!13;CL:1000413!4.40e-08!9;CL:0000222!1.44e-07!119 | |ontology_enrichment_celltype=CL:0000066!2.84e-25!254;CL:0002139!5.53e-20!24;CL:0000115!1.30e-18!35;CL:0002078!1.23e-17!44;CL:0000076!1.34e-13!62;CL:0000213!1.44e-12!57;CL:0000215!1.44e-12!57;CL:0000071!2.55e-12!18;CL:0002546!2.55e-12!18;CL:0000220!1.44e-10!246;CL:0002321!2.46e-10!248;CL:0005020!5.52e-10!6;CL:0002138!5.52e-10!6;CL:0005022!5.52e-10!6;CL:0002681!2.27e-08!13;CL:0002584!2.27e-08!13;CL:1000413!4.40e-08!9;CL:0000222!1.44e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0002188;2.46e-30;5!CL:0000115;4.04e-26;36!CL:0002144;2.10e-23;3!CL:1000746;6.80e-22;7!CL:1000612;6.80e-22;7!CL:0002078;4.62e-15;45!CL:0002681;4.63e-13;12!CL:0002584;4.63e-13;12!CL:0002139;2.02e-11;24!CL:1000449;1.42e-10;15!CL:0000213;6.44e-10;58!CL:0000215;6.44e-10;58!CL:0002262;1.51e-09;2!CL:1000398;1.51e-09;2!CL:1000497;2.13e-09;17!CL:0002518;2.13e-09;17!CL:0000071;5.60e-09;18!CL:0000632;8.86e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002188,1.91e-30,5;CL:0000115,7.20e-29,36;CL:0002144,1.68e-23,3;CL:0002078,5.16e-23,45;CL:1000746,5.69e-22,7;CL:1000612,5.69e-22,7;CL:0000213,9.41e-18,58;CL:0000215,9.41e-18,58;CL:0002681,4.18e-13,12;CL:0002584,4.18e-13,12;CL:0002139,2.08e-11,24;CL:1000449,1.31e-10,15;CL:0002262,1.33e-09,2;CL:1000398,1.33e-09,2;CL:1000497,1.98e-09,17;CL:0002518,1.98e-09,17;CL:0000071,5.68e-09,18;CL:0002546,5.68e-09,18;CL:0000222,3.30e-08,121;CL:0000632,7.70e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;5.60e-09;18 | |||
|ontology_enrichment_disease=DOID:305!4.07e-11!106;DOID:0050687!1.88e-09!143 | |ontology_enrichment_disease=DOID:305!4.07e-11!106;DOID:0050687!1.88e-09!143 | ||
|ontology_enrichment_disease_v019=DOID:1799;3.44e-18;1!DOID:10165;3.44e-18;1!DOID:1798;3.44e-18;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,3.75e-18,1;DOID:10165,3.75e-18,1;DOID:1798,3.75e-18,1 | |||
|ontology_enrichment_uberon=UBERON:0001986!2.55e-12!18;UBERON:0004638!2.55e-12!18;UBERON:0004852!2.55e-12!18;UBERON:0000487!6.06e-11!22;UBERON:0000055!1.31e-10!69;UBERON:0002049!2.00e-10!79;UBERON:0007798!2.00e-10!79;UBERON:0000477!2.61e-10!286;UBERON:0003914!4.02e-10!118;UBERON:0002465!3.76e-09!10;UBERON:0006914!3.85e-09!25;UBERON:0003104!6.82e-09!238;UBERON:0009142!6.82e-09!238;UBERON:0001225!2.27e-08!13;UBERON:0008987!2.27e-08!13;UBERON:0004111!2.79e-08!241;UBERON:0003915!4.40e-08!9;UBERON:0004700!4.40e-08!9;UBERON:0001917!4.40e-08!9;UBERON:0001851!8.83e-08!16;UBERON:0000353!1.71e-07!17;UBERON:0000483!2.21e-07!309;UBERON:0001007!3.11e-07!155;UBERON:0001555!3.11e-07!155;UBERON:0007026!3.11e-07!155;UBERON:0001473!3.47e-07!8;UBERON:0004536!3.47e-07!8;UBERON:0006558!3.47e-07!8;UBERON:0000481!3.54e-07!347;UBERON:0000119!3.83e-07!312;UBERON:0001981!4.07e-07!60;UBERON:0007500!4.07e-07!60;UBERON:0004537!4.07e-07!60;UBERON:0006965!4.07e-07!60;UBERON:0000490!5.78e-07!138 | |ontology_enrichment_uberon=UBERON:0001986!2.55e-12!18;UBERON:0004638!2.55e-12!18;UBERON:0004852!2.55e-12!18;UBERON:0000487!6.06e-11!22;UBERON:0000055!1.31e-10!69;UBERON:0002049!2.00e-10!79;UBERON:0007798!2.00e-10!79;UBERON:0000477!2.61e-10!286;UBERON:0003914!4.02e-10!118;UBERON:0002465!3.76e-09!10;UBERON:0006914!3.85e-09!25;UBERON:0003104!6.82e-09!238;UBERON:0009142!6.82e-09!238;UBERON:0001225!2.27e-08!13;UBERON:0008987!2.27e-08!13;UBERON:0004111!2.79e-08!241;UBERON:0003915!4.40e-08!9;UBERON:0004700!4.40e-08!9;UBERON:0001917!4.40e-08!9;UBERON:0001851!8.83e-08!16;UBERON:0000353!1.71e-07!17;UBERON:0000483!2.21e-07!309;UBERON:0001007!3.11e-07!155;UBERON:0001555!3.11e-07!155;UBERON:0007026!3.11e-07!155;UBERON:0001473!3.47e-07!8;UBERON:0004536!3.47e-07!8;UBERON:0006558!3.47e-07!8;UBERON:0000481!3.54e-07!347;UBERON:0000119!3.83e-07!312;UBERON:0001981!4.07e-07!60;UBERON:0007500!4.07e-07!60;UBERON:0004537!4.07e-07!60;UBERON:0006965!4.07e-07!60;UBERON:0000490!5.78e-07!138 | ||
|ontology_enrichment_uberon_v019=UBERON:0010523;2.10e-23;3!UBERON:0001915;2.10e-23;3!UBERON:0001982;2.10e-23;3!UBERON:0000074;6.80e-22;7!UBERON:0001229;6.80e-22;7!UBERON:0000353;6.05e-18;15!UBERON:0001225;4.63e-13;12!UBERON:0008987;4.63e-13;12!UBERON:0001851;1.42e-10;15!UBERON:0006555;1.42e-10;15!UBERON:0004819;1.42e-10;15!UBERON:0001285;1.42e-10;15!UBERON:0007684;1.42e-10;15!UBERON:0001281;1.51e-09;2!UBERON:0003497;1.51e-09;2!UBERON:0003909;1.51e-09;2!UBERON:0003835;1.51e-09;2!UBERON:0004638;5.60e-09;18!UBERON:0001986;5.60e-09;18!UBERON:0004852;5.60e-09;18!UBERON:0000487;1.92e-07;22!UBERON:0002113;8.17e-07;24!UBERON:0011143;8.17e-07;24!UBERON:0001723;8.86e-07;3!UBERON:0001280;8.86e-07;3!UBERON:0004647;8.86e-07;3!UBERON:0001033;8.86e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,1.68e-23,3;UBERON:0001915,1.68e-23,3;UBERON:0001982,1.68e-23,3;UBERON:0010532,5.69e-22,7;UBERON:0000074,5.69e-22,7;UBERON:0001229,5.69e-22,7;UBERON:0001230,5.69e-22,7;UBERON:0003220,5.69e-22,7;UBERON:0005749,5.69e-22,7;UBERON:0004199,5.69e-22,7;UBERON:0004209,5.69e-22,7;UBERON:0004198,5.69e-22,7;UBERON:0005103,2.57e-19,8;UBERON:0000083,2.57e-19,8;UBERON:0009201,2.57e-19,8;UBERON:0006553,2.57e-19,8;UBERON:0003074,2.57e-19,8;UBERON:0003060,2.57e-19,8;UBERON:0000353,5.08e-18,15;UBERON:0000080,2.99e-17,9;UBERON:0002120,2.99e-17,9;UBERON:0004875,2.99e-17,9;UBERON:0005721,2.99e-17,9;UBERON:0005754,2.99e-17,9;UBERON:0007297,2.99e-17,9;UBERON:0000058,2.62e-14,19;UBERON:0004876,3.08e-14,11;UBERON:0001225,4.18e-13,12;UBERON:0008987,4.18e-13,12;UBERON:0003887,4.18e-13,12;UBERON:0001851,1.31e-10,15;UBERON:0004211,1.31e-10,15;UBERON:0009773,1.31e-10,15;UBERON:0001231,1.31e-10,15;UBERON:0001285,1.31e-10,15;UBERON:0007684,1.31e-10,15;UBERON:0004208,1.31e-10,15;UBERON:0006555,5.55e-10,16;UBERON:0004819,5.55e-10,16;UBERON:0001281,1.33e-09,2;UBERON:0003497,1.33e-09,2;UBERON:0003909,1.33e-09,2;UBERON:0003835,1.33e-09,2;UBERON:0004638,5.68e-09,18;UBERON:0001986,5.68e-09,18;UBERON:0004852,5.68e-09,18;UBERON:0003914,1.59e-08,117;UBERON:0005172,9.99e-08,54;UBERON:0005173,9.99e-08,54;UBERON:0000487,1.94e-07,22;UBERON:0002417,5.97e-07,60;UBERON:0000916,5.97e-07,60;UBERON:0001280,8.15e-07,3;UBERON:0004647,8.15e-07,3;UBERON:0005171,8.15e-07,3 | |||
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|short_description=p@chr5:148651758..148651769,- | |short_description=p@chr5:148651758..148651769,- | ||
}} | }} |
Latest revision as of 11:22, 30 July 2015
Short description: | p@chr5:148651758..148651769, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:148651758..148651769, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular endothelial cell | 1.91e-30 | 5 |
endothelial cell | 7.20e-29 | 36 |
capillary endothelial cell | 1.68e-23 | 3 |
meso-epithelial cell | 5.16e-23 | 45 |
glomerular cell | 5.69e-22 | 7 |
kidney corpuscule cell | 5.69e-22 | 7 |
lining cell | 9.41e-18 | 58 |
barrier cell | 9.41e-18 | 58 |
kidney cortical cell | 4.18e-13 | 12 |
renal cortical epithelial cell | 4.18e-13 | 12 |
endothelial cell of vascular tree | 2.08e-11 | 24 |
epithelial cell of nephron | 1.31e-10 | 15 |
endothelial cell of sinusoid | 1.33e-09 | 2 |
endothelial cell of hepatic sinusoid | 1.33e-09 | 2 |
kidney cell | 1.98e-09 | 17 |
kidney epithelial cell | 1.98e-09 | 17 |
blood vessel endothelial cell | 5.68e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.68e-09 | 18 |
mesodermal cell | 3.30e-08 | 121 |
hepatic stellate cell | 7.70e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 3.75e-18 | 1 |
endocrine pancreas cancer | 3.75e-18 | 1 |
pancreatic endocrine carcinoma | 3.75e-18 | 1 |