FFCP PHASE1:Hg19::chr6:28234885..28234960,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000437778,ENST00000537979_5end | |association_with_transcript=0bp_to_ENST00000437778,ENST00000537979_5end | ||
|cluster_id=chr6:28234885..28234960,+ | |||
|coexpression_cluster_id=C1234 | |coexpression_cluster_id=C1234 | ||
|description=CAGE_peak_1_at_ENST00000437778_5end,CAGE_peak_1_at_ENST00000537979_5end | |description=CAGE_peak_1_at_ENST00000437778_5end,CAGE_peak_1_at_ENST00000537979_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.24e-10;82 | |ontology_enrichment_development_v019=UBERON:0006601;4.24e-10;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.98e-38!115;UBERON:0001049!1.69e-25!57;UBERON:0005068!1.69e-25!57;UBERON:0006241!1.69e-25!57;UBERON:0007135!1.69e-25!57;UBERON:0001017!7.21e-25!82;UBERON:0005743!3.12e-24!86;UBERON:0000073!5.58e-24!94;UBERON:0001016!5.58e-24!94;UBERON:0000955!5.11e-23!69;UBERON:0006238!5.11e-23!69;UBERON:0002780!8.82e-23!41;UBERON:0001890!8.82e-23!41;UBERON:0006240!8.82e-23!41;UBERON:0003080!1.30e-22!42;UBERON:0002616!4.98e-21!59;UBERON:0001893!7.94e-19!34;UBERON:0002020!9.55e-19!34;UBERON:0003528!9.55e-19!34;UBERON:0002791!2.96e-18!33;UBERON:0002346!7.45e-18!90;UBERON:0001869!1.10e-17!32;UBERON:0003075!1.01e-16!86;UBERON:0007284!1.01e-16!86;UBERON:0000153!3.76e-15!129;UBERON:0007811!3.76e-15!129;UBERON:0003056!1.35e-14!61;UBERON:0000033!2.91e-14!123;UBERON:0000924!5.69e-14!173;UBERON:0006601!5.69e-14!173;UBERON:0000956!1.52e-13!25;UBERON:0000203!1.52e-13!25;UBERON:0002619!1.54e-13!22;UBERON:0004121!5.10e-13!169;UBERON:0001950!1.24e-12!20 | |ontology_enrichment_uberon=UBERON:0007023!8.98e-38!115;UBERON:0001049!1.69e-25!57;UBERON:0005068!1.69e-25!57;UBERON:0006241!1.69e-25!57;UBERON:0007135!1.69e-25!57;UBERON:0001017!7.21e-25!82;UBERON:0005743!3.12e-24!86;UBERON:0000073!5.58e-24!94;UBERON:0001016!5.58e-24!94;UBERON:0000955!5.11e-23!69;UBERON:0006238!5.11e-23!69;UBERON:0002780!8.82e-23!41;UBERON:0001890!8.82e-23!41;UBERON:0006240!8.82e-23!41;UBERON:0003080!1.30e-22!42;UBERON:0002616!4.98e-21!59;UBERON:0001893!7.94e-19!34;UBERON:0002020!9.55e-19!34;UBERON:0003528!9.55e-19!34;UBERON:0002791!2.96e-18!33;UBERON:0002346!7.45e-18!90;UBERON:0001869!1.10e-17!32;UBERON:0003075!1.01e-16!86;UBERON:0007284!1.01e-16!86;UBERON:0000153!3.76e-15!129;UBERON:0007811!3.76e-15!129;UBERON:0003056!1.35e-14!61;UBERON:0000033!2.91e-14!123;UBERON:0000924!5.69e-14!173;UBERON:0006601!5.69e-14!173;UBERON:0000956!1.52e-13!25;UBERON:0000203!1.52e-13!25;UBERON:0002619!1.54e-13!22;UBERON:0004121!5.10e-13!169;UBERON:0001950!1.24e-12!20 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.70e-16;41!UBERON:0001890;1.70e-16;41!UBERON:0003528;3.57e-16;34!UBERON:0002020;3.57e-16;34!UBERON:0001893;3.58e-16;34!UBERON:0001869;5.98e-16;32!UBERON:0002791;6.50e-16;32!UBERON:0000073;1.06e-14;53!UBERON:0002616;1.06e-14;53!UBERON:0002619;1.57e-13;22!UBERON:0000956;1.65e-13;25!UBERON:0000203;1.65e-13;25!UBERON:0001950;1.26e-12;20!UBERON:0001017;4.22e-11;75!UBERON:0000955;5.98e-11;68!UBERON:0007023;1.08e-10;114!UBERON:0001016;1.86e-10;83 | |ontology_enrichment_uberon_v019=UBERON:0002780;1.70e-16;41!UBERON:0001890;1.70e-16;41!UBERON:0003528;3.57e-16;34!UBERON:0002020;3.57e-16;34!UBERON:0001893;3.58e-16;34!UBERON:0001869;5.98e-16;32!UBERON:0002791;6.50e-16;32!UBERON:0000073;1.06e-14;53!UBERON:0002616;1.06e-14;53!UBERON:0002619;1.57e-13;22!UBERON:0000956;1.65e-13;25!UBERON:0000203;1.65e-13;25!UBERON:0001950;1.26e-12;20!UBERON:0001017;4.22e-11;75!UBERON:0000955;5.98e-11;68!UBERON:0007023;1.08e-10;114!UBERON:0001016;1.86e-10;83 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.17e-37,114;UBERON:0001049,1.31e-25,56;UBERON:0005068,1.31e-25,56;UBERON:0006241,1.31e-25,56;UBERON:0007135,1.31e-25,56;UBERON:0001017,6.90e-25,81;UBERON:0001016,1.61e-24,89;UBERON:0000073,2.94e-24,53;UBERON:0002616,2.94e-24,53;UBERON:0000955,4.68e-23,68;UBERON:0006238,4.68e-23,68;UBERON:0002780,8.82e-23,41;UBERON:0001890,8.82e-23,41;UBERON:0003080,8.82e-23,41;UBERON:0006240,8.82e-23,41;UBERON:0001893,7.94e-19,34;UBERON:0002346,9.19e-19,86;UBERON:0003528,9.55e-19,34;UBERON:0002020,9.55e-19,34;UBERON:0001869,1.10e-17,32;UBERON:0002791,1.28e-17,32;UBERON:0003075,1.30e-17,82;UBERON:0007284,1.30e-17,82;UBERON:0003056,3.74e-15,61;UBERON:0004121,5.64e-14,171;UBERON:0000924,5.64e-14,171;UBERON:0006601,5.64e-14,171;UBERON:0000956,1.52e-13,25;UBERON:0000203,1.52e-13,25;UBERON:0002619,1.54e-13,22;UBERON:0001950,1.24e-12,20;UBERON:0010371,7.94e-12,104;UBERON:0011216,2.63e-10,223;UBERON:0010314,3.25e-10,132 | |||
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| ||
|short_description=p1@ENST00000437778,p1@ENST00000537979 | |short_description=p1@ENST00000437778,p1@ENST00000537979 | ||
}} | }} |
Latest revision as of 23:11, 30 July 2015
Short description: | p1@ENST00000437778, p1@ENST00000537979 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000437778_5end, CAGE_peak_1_at_ENST00000537979_5end |
Coexpression cluster: | C1234_cerebellum_parietal_pineal_duodenum_occipital_temporal_thalamus |
Association with transcript: | 0bp_to_ENST00000437778, ENST00000537979_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data