FFCP PHASE1:Hg19::chr6:30458196..30458253,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:30458196..30458253,+ | |||
|coexpression_cluster_id=C500 | |||
|description=CAGE_peak_at_chr6:30458196..30458253,+ | |description=CAGE_peak_at_chr6:30458196..30458253,+ | ||
|id=chr6:30458196..30458253,+ | |id=chr6:30458196..30458253,+ | ||
|ontology_enrichment_celltype=CL:0000738!6.10e-35!140;CL:0002087!3.55e-28!119;CL:0002031!6.24e-27!124;CL:0002057!3.62e-25!42;CL:0000037!7.89e-25!172;CL:0000566!7.89e-25!172;CL:0000766!3.62e-24!76;CL:0002032!4.44e-23!165;CL:0000837!4.44e-23!165;CL:0000988!9.60e-23!182;CL:0000860!1.61e-21!45;CL:0002009!2.89e-20!65;CL:0002194!7.70e-20!63;CL:0000576!7.70e-20!63;CL:0000040!7.70e-20!63;CL:0000559!7.70e-20!63;CL:0000557!1.02e-19!71;CL:0000839!2.13e-18!70;CL:0000763!9.03e-15!112;CL:0000049!9.03e-15!112;CL:0000134!2.21e-11!358;CL:0002320!8.56e-11!365;CL:0000791!3.60e-09!18;CL:0000789!3.60e-09!18;CL:0002420!3.60e-09!18;CL:0002419!3.60e-09!18;CL:0000790!3.60e-09!18;CL:0000048!6.59e-09!430;CL:0000838!1.48e-08!52;CL:0000723!2.50e-08!436;CL:0000542!3.58e-08!53;CL:0000051!3.58e-08!53;CL:0000034!5.56e-08!444;CL:0000219!2.07e-07!390 | |ontology_enrichment_celltype=CL:0000738!6.10e-35!140;CL:0002087!3.55e-28!119;CL:0002031!6.24e-27!124;CL:0002057!3.62e-25!42;CL:0000037!7.89e-25!172;CL:0000566!7.89e-25!172;CL:0000766!3.62e-24!76;CL:0002032!4.44e-23!165;CL:0000837!4.44e-23!165;CL:0000988!9.60e-23!182;CL:0000860!1.61e-21!45;CL:0002009!2.89e-20!65;CL:0002194!7.70e-20!63;CL:0000576!7.70e-20!63;CL:0000040!7.70e-20!63;CL:0000559!7.70e-20!63;CL:0000557!1.02e-19!71;CL:0000839!2.13e-18!70;CL:0000763!9.03e-15!112;CL:0000049!9.03e-15!112;CL:0000134!2.21e-11!358;CL:0002320!8.56e-11!365;CL:0000791!3.60e-09!18;CL:0000789!3.60e-09!18;CL:0002420!3.60e-09!18;CL:0002419!3.60e-09!18;CL:0000790!3.60e-09!18;CL:0000048!6.59e-09!430;CL:0000838!1.48e-08!52;CL:0000723!2.50e-08!436;CL:0000542!3.58e-08!53;CL:0000051!3.58e-08!53;CL:0000034!5.56e-08!444;CL:0000219!2.07e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.19e-26;33!CL:0002057;4.19e-26;33!CL:0000473;7.99e-24;39!CL:0000234;7.99e-24;39!CL:0000576;3.54e-20;48!CL:0000766;5.28e-17;69!CL:0002087;2.81e-12;104!CL:0000791;5.76e-11;18!CL:0000789;5.76e-11;18!CL:0002419;5.76e-11;18!CL:0000738;7.28e-11;136!CL:0000625;4.55e-08;11!CL:0000084;9.91e-08;25!CL:0000763;1.21e-07;100!CL:0000219;6.18e-07;193!CL:0000988;6.63e-07;177!CL:0000094;9.86e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.54e-50,136;CL:0002087,1.19e-40,115;CL:0002031,1.39e-39,120;CL:0000766,1.22e-38,72;CL:0000037,6.04e-36,168;CL:0000473,1.24e-35,48;CL:0000234,1.24e-35,48;CL:0002032,8.33e-34,161;CL:0000837,8.33e-34,161;CL:0002009,2.12e-33,61;CL:0000860,3.73e-33,42;CL:0002057,3.73e-33,42;CL:0002194,7.22e-33,59;CL:0000576,7.22e-33,59;CL:0000040,7.22e-33,59;CL:0000559,7.22e-33,59;CL:0000557,1.22e-32,67;CL:0000988,7.92e-32,177;CL:0000839,3.34e-31,66;CL:0000763,3.31e-24,108;CL:0000049,3.31e-24,108;CL:0000134,1.09e-13,354;CL:0002320,8.11e-13,361;CL:0000791,3.68e-11,18;CL:0000789,3.68e-11,18;CL:0002420,3.68e-11,18;CL:0002419,3.68e-11,18;CL:0000790,3.68e-11,18;CL:0000219,1.25e-09,386;CL:0000048,1.64e-09,427;CL:0000838,2.42e-09,52;CL:0000723,4.92e-09,433;CL:0000542,6.00e-09,53;CL:0000051,6.00e-09,53;CL:0000034,9.01e-09,441;CL:0000625,3.98e-08,11;CL:0000084,7.52e-08,25;CL:0000827,7.52e-08,25;CL:0000094,7.12e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;3.21e-24;42!CL:0000790;5.76e-11;18!CL:0000049;7.77e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.20e-21!112;UBERON:0002390!2.65e-21!102;UBERON:0003061!2.65e-21!102;UBERON:0002371!2.70e-18!80;UBERON:0003081!4.22e-16!216;UBERON:0001474!5.62e-15!86;UBERON:0002405!5.38e-13!115;UBERON:0004765!6.08e-12!101;UBERON:0001434!6.08e-12!101;UBERON:0002384!7.01e-10!375;UBERON:0002204!3.36e-08!167 | |ontology_enrichment_uberon=UBERON:0002193!2.20e-21!112;UBERON:0002390!2.65e-21!102;UBERON:0003061!2.65e-21!102;UBERON:0002371!2.70e-18!80;UBERON:0003081!4.22e-16!216;UBERON:0001474!5.62e-15!86;UBERON:0002405!5.38e-13!115;UBERON:0004765!6.08e-12!101;UBERON:0001434!6.08e-12!101;UBERON:0002384!7.01e-10!375;UBERON:0002204!3.36e-08!167 | ||
|ontology_enrichment_uberon_v019= | |||
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| ||
|short_description=p@chr6:30458196..30458253,+ | |short_description=p@chr6:30458196..30458253,+ | ||
}} | }} |
Latest revision as of 23:33, 30 July 2015
Short description: | p@chr6:30458196..30458253, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:30458196..30458253, + |
Coexpression cluster: | C500_Neutrophils_Monocytederived_blood_CD14_Eosinophils_lung_mixed |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.12e-32 | 98 |
blood island | 1.12e-32 | 98 |
hemolymphoid system | 8.12e-32 | 108 |
bone marrow | 2.08e-29 | 76 |
immune system | 4.40e-26 | 93 |
bone element | 2.49e-25 | 82 |
lateral plate mesoderm | 6.77e-23 | 203 |
skeletal element | 1.99e-21 | 90 |
skeletal system | 2.59e-19 | 100 |
connective tissue | 5.84e-12 | 371 |
mesoderm | 2.53e-10 | 315 |
mesoderm-derived structure | 2.53e-10 | 315 |
presumptive mesoderm | 2.53e-10 | 315 |
musculoskeletal system | 1.08e-09 | 167 |