FFCP PHASE1:Hg19::chr7:22382780..22382797,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:22382780..22382797,- | |||
|coexpression_cluster_id=C35 | |coexpression_cluster_id=C35 | ||
|description=CAGE_peak_at_chr7:22382780..22382797,- | |description=CAGE_peak_at_chr7:22382780..22382797,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006222;6.58e-50;1!UBERON:0010122;4.32e-26;2 | |ontology_enrichment_development_v019=UBERON:0006222;6.58e-50;1!UBERON:0010122;4.32e-26;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!1.12e-51!41;UBERON:0001890!1.12e-51!41;UBERON:0006240!1.12e-51!41;UBERON:0003080!1.90e-50!42;UBERON:0009663!8.45e-48!7;UBERON:0001869!4.31e-47!32;UBERON:0001893!2.41e-44!34;UBERON:0002791!9.38e-38!33;UBERON:0002308!3.18e-37!9;UBERON:0002420!3.18e-37!9;UBERON:0000125!3.18e-37!9;UBERON:0007245!3.18e-37!9;UBERON:0010009!3.18e-37!9;UBERON:0010011!3.18e-37!9;UBERON:0000454!3.18e-37!9;UBERON:0001049!4.35e-37!57;UBERON:0005068!4.35e-37!57;UBERON:0006241!4.35e-37!57;UBERON:0007135!4.35e-37!57;UBERON:0002020!1.19e-36!34;UBERON:0003528!1.19e-36!34;UBERON:0002616!8.25e-36!59;UBERON:0000955!5.32e-35!69;UBERON:0006238!5.32e-35!69;UBERON:0003056!1.30e-34!61;UBERON:0000369!3.43e-31!4;UBERON:0002435!3.43e-31!4;UBERON:0000204!3.43e-31!4;UBERON:0010082!3.43e-31!4;UBERON:0001017!2.23e-29!82;UBERON:0005743!5.57e-28!86;UBERON:0001875!2.39e-27!2;UBERON:0006514!2.39e-27!2;UBERON:0000073!2.95e-25!94;UBERON:0001016!2.95e-25!94;UBERON:0003075!2.72e-24!86;UBERON:0007284!2.72e-24!86;UBERON:0002346!3.64e-23!90;UBERON:0007023!4.41e-21!115;UBERON:0000200!4.11e-20!6;UBERON:0000033!2.80e-19!123;UBERON:0005383!3.52e-19!3;UBERON:0005382!3.52e-19!3;UBERON:0000153!2.50e-18!129;UBERON:0007811!2.50e-18!129;UBERON:0001950!1.42e-15!20;UBERON:0001874!5.42e-15!1;UBERON:0001882!6.22e-15!1;UBERON:0005403!6.22e-15!1;UBERON:0002022!1.41e-14!1;UBERON:0007190!1.84e-14!1;UBERON:0002581!2.75e-14!1;UBERON:0002619!3.20e-14!22;UBERON:0004121!1.34e-13!169;UBERON:0000924!2.97e-13!173;UBERON:0006601!2.97e-13!173;UBERON:0000956!1.40e-12!25;UBERON:0000203!1.40e-12!25;UBERON:0000025!8.05e-12!194;UBERON:0001872!2.68e-11!5;UBERON:0004111!3.31e-09!241;UBERON:0001894!1.32e-08!7;UBERON:0006222!1.32e-08!7;UBERON:0001873!3.56e-08!2;UBERON:0010122!3.56e-08!2;UBERON:0001897!5.74e-08!2;UBERON:0000477!1.71e-07!286;UBERON:0000483!8.31e-07!309 | |ontology_enrichment_uberon=UBERON:0002780!1.12e-51!41;UBERON:0001890!1.12e-51!41;UBERON:0006240!1.12e-51!41;UBERON:0003080!1.90e-50!42;UBERON:0009663!8.45e-48!7;UBERON:0001869!4.31e-47!32;UBERON:0001893!2.41e-44!34;UBERON:0002791!9.38e-38!33;UBERON:0002308!3.18e-37!9;UBERON:0002420!3.18e-37!9;UBERON:0000125!3.18e-37!9;UBERON:0007245!3.18e-37!9;UBERON:0010009!3.18e-37!9;UBERON:0010011!3.18e-37!9;UBERON:0000454!3.18e-37!9;UBERON:0001049!4.35e-37!57;UBERON:0005068!4.35e-37!57;UBERON:0006241!4.35e-37!57;UBERON:0007135!4.35e-37!57;UBERON:0002020!1.19e-36!34;UBERON:0003528!1.19e-36!34;UBERON:0002616!8.25e-36!59;UBERON:0000955!5.32e-35!69;UBERON:0006238!5.32e-35!69;UBERON:0003056!1.30e-34!61;UBERON:0000369!3.43e-31!4;UBERON:0002435!3.43e-31!4;UBERON:0000204!3.43e-31!4;UBERON:0010082!3.43e-31!4;UBERON:0001017!2.23e-29!82;UBERON:0005743!5.57e-28!86;UBERON:0001875!2.39e-27!2;UBERON:0006514!2.39e-27!2;UBERON:0000073!2.95e-25!94;UBERON:0001016!2.95e-25!94;UBERON:0003075!2.72e-24!86;UBERON:0007284!2.72e-24!86;UBERON:0002346!3.64e-23!90;UBERON:0007023!4.41e-21!115;UBERON:0000200!4.11e-20!6;UBERON:0000033!2.80e-19!123;UBERON:0005383!3.52e-19!3;UBERON:0005382!3.52e-19!3;UBERON:0000153!2.50e-18!129;UBERON:0007811!2.50e-18!129;UBERON:0001950!1.42e-15!20;UBERON:0001874!5.42e-15!1;UBERON:0001882!6.22e-15!1;UBERON:0005403!6.22e-15!1;UBERON:0002022!1.41e-14!1;UBERON:0007190!1.84e-14!1;UBERON:0002581!2.75e-14!1;UBERON:0002619!3.20e-14!22;UBERON:0004121!1.34e-13!169;UBERON:0000924!2.97e-13!173;UBERON:0006601!2.97e-13!173;UBERON:0000956!1.40e-12!25;UBERON:0000203!1.40e-12!25;UBERON:0000025!8.05e-12!194;UBERON:0001872!2.68e-11!5;UBERON:0004111!3.31e-09!241;UBERON:0001894!1.32e-08!7;UBERON:0006222!1.32e-08!7;UBERON:0001873!3.56e-08!2;UBERON:0010122!3.56e-08!2;UBERON:0001897!5.74e-08!2;UBERON:0000477!1.71e-07!286;UBERON:0000483!8.31e-07!309 | ||
|ontology_enrichment_uberon_v019=UBERON:0000369;8.91e-111;4!UBERON:0002435;8.91e-111;4!UBERON:0000204;8.91e-111;4!UBERON:0005383;1.71e-66;3!UBERON:0005382;1.71e-66;3!UBERON:0009663;6.87e-64;7!UBERON:0001874;2.42e-50;1!UBERON:0001882;3.99e-50;1!UBERON:0005403;3.99e-50;1!UBERON:0002420;5.60e-50;9!UBERON:0000125;5.60e-50;9!UBERON:0007245;5.60e-50;9!UBERON:0002308;5.60e-50;9!UBERON:0010009;5.60e-50;9!UBERON:0010011;5.60e-50;9!UBERON:0000454;5.60e-50;9!UBERON:0001873;4.32e-26;2!UBERON:0002780;3.08e-16;41!UBERON:0001890;3.08e-16;41!UBERON:0002791;5.90e-15;32!UBERON:0001869;2.45e-13;32!UBERON:0003528;2.46e-13;34!UBERON:0002020;2.46e-13;34!UBERON:0000073;5.74e-13;53!UBERON:0002616;5.74e-13;53!UBERON:0001893;1.58e-12;34!UBERON:0000349;3.26e-11;5!UBERON:0000955;6.77e-11;68!UBERON:0001017;8.53e-09;75!UBERON:0001894;2.35e-08;7 | |ontology_enrichment_uberon_v019=UBERON:0000369;8.91e-111;4!UBERON:0002435;8.91e-111;4!UBERON:0000204;8.91e-111;4!UBERON:0005383;1.71e-66;3!UBERON:0005382;1.71e-66;3!UBERON:0009663;6.87e-64;7!UBERON:0001874;2.42e-50;1!UBERON:0001882;3.99e-50;1!UBERON:0005403;3.99e-50;1!UBERON:0002420;5.60e-50;9!UBERON:0000125;5.60e-50;9!UBERON:0007245;5.60e-50;9!UBERON:0002308;5.60e-50;9!UBERON:0010009;5.60e-50;9!UBERON:0010011;5.60e-50;9!UBERON:0000454;5.60e-50;9!UBERON:0001873;4.32e-26;2!UBERON:0002780;3.08e-16;41!UBERON:0001890;3.08e-16;41!UBERON:0002791;5.90e-15;32!UBERON:0001869;2.45e-13;32!UBERON:0003528;2.46e-13;34!UBERON:0002020;2.46e-13;34!UBERON:0000073;5.74e-13;53!UBERON:0002616;5.74e-13;53!UBERON:0001893;1.58e-12;34!UBERON:0000349;3.26e-11;5!UBERON:0000955;6.77e-11;68!UBERON:0001017;8.53e-09;75!UBERON:0001894;2.35e-08;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,8.91e-111,4;UBERON:0002435,8.91e-111,4;UBERON:0000204,8.91e-111,4;UBERON:0010082,8.91e-111,4;UBERON:0005383,1.71e-66,3;UBERON:0005382,1.71e-66,3;UBERON:0009663,6.87e-64,7;UBERON:0001874,2.42e-50,1;UBERON:0001882,3.99e-50,1;UBERON:0005403,3.99e-50,1;UBERON:0002420,5.60e-50,9;UBERON:0000125,5.60e-50,9;UBERON:0007245,5.60e-50,9;UBERON:0002308,5.60e-50,9;UBERON:0010009,5.60e-50,9;UBERON:0010011,5.60e-50,9;UBERON:0000454,5.60e-50,9;UBERON:0001873,4.32e-26,2;UBERON:0010122,4.32e-26,2;UBERON:0002780,1.19e-19,41;UBERON:0001890,1.19e-19,41;UBERON:0003080,1.19e-19,41;UBERON:0006240,1.19e-19,41;UBERON:0000073,1.70e-15,53;UBERON:0002616,1.70e-15,53;UBERON:0001049,9.92e-15,56;UBERON:0005068,9.92e-15,56;UBERON:0006241,9.92e-15,56;UBERON:0007135,9.92e-15,56;UBERON:0002791,2.01e-14,32;UBERON:0001869,2.01e-14,32;UBERON:0003528,1.18e-13,34;UBERON:0002020,1.18e-13,34;UBERON:0001893,1.18e-13,34;UBERON:0003056,1.29e-13,61;UBERON:0000955,3.68e-12,68;UBERON:0006238,3.68e-12,68;UBERON:0000349,3.26e-11,5;UBERON:0001017,2.17e-10,81;UBERON:0003075,2.17e-10,82;UBERON:0007284,2.17e-10,82;UBERON:0002346,5.98e-10,86;UBERON:0001016,1.88e-09,89;UBERON:0010371,2.22e-08,104;UBERON:0001894,2.35e-08,7;UBERON:0006222,2.35e-08,7;UBERON:0007023,8.86e-08,114;UBERON:0010314,8.99e-07,132 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,13.5068011260457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.04543779442941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485996453264197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.33102568300614,0,0,0.615349092722265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,10.0553977546241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517164979309476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,13.5068011260457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.04543779442941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485996453264197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.33102568300614,0,0,0.615349092722265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,10.0553977546241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517164979309476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr7:22382780..22382797,- | |short_description=p@chr7:22382780..22382797,- | ||
}} | }} |
Latest revision as of 08:32, 31 July 2015
Short description: | p@chr7:22382780..22382797, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:22382780..22382797, - |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data