FFCP PHASE1:Hg19::chrX:47445998..47446031,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chrX:47445998..47446031,+ | |||
|coexpression_cluster_id=C609 | |||
|description=CAGE_peak_at_chrX:47445998..47446031,+ | |description=CAGE_peak_at_chrX:47445998..47446031,+ | ||
|id=chrX:47445998..47446031,+ | |id=chrX:47445998..47446031,+ | ||
|ontology_enrichment_celltype=CL:0000055!9.15e-22!180;CL:0000048!2.56e-16!430;CL:0000723!1.06e-15!436;CL:0000034!6.92e-15!444;CL:0000680!1.43e-13!57;CL:0000056!1.43e-13!57;CL:0000355!1.43e-13!57;CL:0000187!5.46e-13!54;CL:0000183!5.65e-13!59;CL:0000057!1.58e-12!75;CL:0000393!1.23e-11!60;CL:0000211!1.23e-11!60;CL:0000192!2.29e-10!42;CL:0000514!2.29e-10!42;CL:0002371!1.08e-09!591;CL:0000144!6.00e-09!625;CL:0000359!1.06e-08!32;CL:0002320!5.73e-08!365;CL:0000548!7.00e-08!679;CL:0000004!7.00e-08!679;CL:0000255!7.00e-08!679;CL:0002334!9.68e-08!12;CL:0000222!2.20e-07!119;CL:0000012!2.35e-07!682;CL:0002494!2.36e-07!16;CL:0000134!3.29e-07!358 | |ontology_enrichment_celltype=CL:0000055!9.15e-22!180;CL:0000048!2.56e-16!430;CL:0000723!1.06e-15!436;CL:0000034!6.92e-15!444;CL:0000680!1.43e-13!57;CL:0000056!1.43e-13!57;CL:0000355!1.43e-13!57;CL:0000187!5.46e-13!54;CL:0000183!5.65e-13!59;CL:0000057!1.58e-12!75;CL:0000393!1.23e-11!60;CL:0000211!1.23e-11!60;CL:0000192!2.29e-10!42;CL:0000514!2.29e-10!42;CL:0002371!1.08e-09!591;CL:0000144!6.00e-09!625;CL:0000359!1.06e-08!32;CL:0002320!5.73e-08!365;CL:0000548!7.00e-08!679;CL:0000004!7.00e-08!679;CL:0000255!7.00e-08!679;CL:0002334!9.68e-08!12;CL:0000222!2.20e-07!119;CL:0000012!2.35e-07!682;CL:0002494!2.36e-07!16;CL:0000134!3.29e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0002494;1.39e-10;16!CL:0002334;3.96e-10;12!CL:0000359;1.15e-09;32!CL:0000192;1.53e-08;43!CL:0000187;1.32e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,4.73e-21,427;CL:0000723,1.39e-20,433;CL:0000034,2.36e-19,441;CL:0002320,2.97e-12,361;CL:0000187,4.55e-12,55;CL:0000680,7.94e-12,58;CL:0000056,7.94e-12,58;CL:0000355,7.94e-12,58;CL:0000057,1.40e-11,76;CL:0000134,2.21e-11,354;CL:0000192,1.13e-10,43;CL:0000514,1.13e-10,43;CL:0000393,1.54e-10,61;CL:0000211,1.54e-10,61;CL:0002494,1.88e-10,16;CL:0002334,3.25e-10,12;CL:0000359,8.79e-10,32;CL:0000219,4.04e-08,386 | |||
|ontology_enrichment_development_v019=CL:0000514;1.53e-08;43 | |||
|ontology_enrichment_disease=DOID:2394!4.72e-07!14 | |ontology_enrichment_disease=DOID:2394!4.72e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;4.50e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.12e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0002204!5.00e-13!167;UBERON:0000926!5.57e-12!448;UBERON:0004120!5.57e-12!448;UBERON:0006603!5.57e-12!448;UBERON:0001134!1.81e-11!61;UBERON:0002036!1.81e-11!61;UBERON:0003082!1.81e-11!61;UBERON:0002385!2.08e-11!63;UBERON:0001015!2.08e-11!63;UBERON:0000383!2.08e-11!63;UBERON:0004290!1.49e-10!70;UBERON:0000914!2.61e-10!83;UBERON:0002329!2.61e-10!83;UBERON:0003077!2.61e-10!83;UBERON:0003059!2.61e-10!83;UBERON:0007282!2.61e-10!83;UBERON:0009618!2.61e-10!83;UBERON:0007285!2.61e-10!83;UBERON:0002384!1.35e-08!375;UBERON:0000948!1.92e-08!24;UBERON:0005498!1.92e-08!24;UBERON:0004140!1.92e-08!24;UBERON:0009881!1.92e-08!24;UBERON:0004141!1.92e-08!24;UBERON:0003084!1.92e-08!24;UBERON:0007005!1.92e-08!24;UBERON:0004139!1.92e-08!24;UBERON:0004291!1.92e-08!24;UBERON:0000486!2.88e-08!82;UBERON:0004872!5.47e-08!84;UBERON:0001637!5.54e-08!42;UBERON:0003509!5.54e-08!42;UBERON:0004572!5.54e-08!42;UBERON:0007100!1.15e-07!27;UBERON:0004573!3.35e-07!33;UBERON:0004571!3.35e-07!33;UBERON:0005256!3.98e-07!143;UBERON:0003914!3.99e-07!118;UBERON:0002100!8.31e-07!216 | |ontology_enrichment_uberon=UBERON:0002204!5.00e-13!167;UBERON:0000926!5.57e-12!448;UBERON:0004120!5.57e-12!448;UBERON:0006603!5.57e-12!448;UBERON:0001134!1.81e-11!61;UBERON:0002036!1.81e-11!61;UBERON:0003082!1.81e-11!61;UBERON:0002385!2.08e-11!63;UBERON:0001015!2.08e-11!63;UBERON:0000383!2.08e-11!63;UBERON:0004290!1.49e-10!70;UBERON:0000914!2.61e-10!83;UBERON:0002329!2.61e-10!83;UBERON:0003077!2.61e-10!83;UBERON:0003059!2.61e-10!83;UBERON:0007282!2.61e-10!83;UBERON:0009618!2.61e-10!83;UBERON:0007285!2.61e-10!83;UBERON:0002384!1.35e-08!375;UBERON:0000948!1.92e-08!24;UBERON:0005498!1.92e-08!24;UBERON:0004140!1.92e-08!24;UBERON:0009881!1.92e-08!24;UBERON:0004141!1.92e-08!24;UBERON:0003084!1.92e-08!24;UBERON:0007005!1.92e-08!24;UBERON:0004139!1.92e-08!24;UBERON:0004291!1.92e-08!24;UBERON:0000486!2.88e-08!82;UBERON:0004872!5.47e-08!84;UBERON:0001637!5.54e-08!42;UBERON:0003509!5.54e-08!42;UBERON:0004572!5.54e-08!42;UBERON:0007100!1.15e-07!27;UBERON:0004573!3.35e-07!33;UBERON:0004571!3.35e-07!33;UBERON:0005256!3.98e-07!143;UBERON:0003914!3.99e-07!118;UBERON:0002100!8.31e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0000948;7.68e-10;22!UBERON:0007100;4.94e-08;25!UBERON:0004457;5.31e-08;9!UBERON:0000042;5.31e-08;9!UBERON:0001013;7.86e-08;14!UBERON:0003688;2.42e-07;6!UBERON:0002358;2.42e-07;6!UBERON:0003684;2.42e-07;6!UBERON:0001178;2.42e-07;6!UBERON:0004573;6.71e-07;33!UBERON:0004571;6.71e-07;33 | |||
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| ||
|short_description=p@chrX:47445998..47446031,+ | |short_description=p@chrX:47445998..47446031,+ | ||
}} | }} |
Latest revision as of 08:25, 1 August 2015
Short description: | p@chrX:47445998..47446031, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:47445998..47446031, + |
Coexpression cluster: | C609_Smooth_mesenchymal_Preadipocyte_Cardiac_Fibroblast_Osteoblast_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 4.73e-21 | 427 |
somatic stem cell | 1.39e-20 | 433 |
stem cell | 2.36e-19 | 441 |
connective tissue cell | 2.97e-12 | 361 |
muscle cell | 4.55e-12 | 55 |
muscle precursor cell | 7.94e-12 | 58 |
myoblast | 7.94e-12 | 58 |
multi-potent skeletal muscle stem cell | 7.94e-12 | 58 |
fibroblast | 1.40e-11 | 76 |
mesenchymal cell | 2.21e-11 | 354 |
smooth muscle cell | 1.13e-10 | 43 |
smooth muscle myoblast | 1.13e-10 | 43 |
electrically responsive cell | 1.54e-10 | 61 |
electrically active cell | 1.54e-10 | 61 |
cardiocyte | 1.88e-10 | 16 |
preadipocyte | 3.25e-10 | 12 |
vascular associated smooth muscle cell | 8.79e-10 | 32 |
motile cell | 4.04e-08 | 386 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.12e-09 | 14 |