FFCP PHASE1:Hg19::chrX:47446039..47446094,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chrX:47446039..47446094,+ | |||
|coexpression_cluster_id=C609 | |coexpression_cluster_id=C609 | ||
|description=CAGE_peak_at_chrX:47446039..47446094,+ | |description=CAGE_peak_at_chrX:47446039..47446094,+ | ||
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|ontology_enrichment_celltype=CL:0000055!4.68e-28!180;CL:0000048!6.68e-23!430;CL:0000723!1.11e-21!436;CL:0000034!2.88e-20!444;CL:0000057!8.95e-17!75;CL:0000680!1.19e-15!57;CL:0000056!1.19e-15!57;CL:0000355!1.19e-15!57;CL:0000183!1.08e-14!59;CL:0000187!1.37e-14!54;CL:0002371!6.56e-14!591;CL:0000393!7.43e-12!60;CL:0000211!7.43e-12!60;CL:0000192!1.26e-11!42;CL:0000514!1.26e-11!42;CL:0002320!1.52e-11!365;CL:0000144!1.91e-11!625;CL:0000134!2.28e-10!358;CL:0000359!6.24e-10!32;CL:0000548!2.31e-09!679;CL:0000004!2.31e-09!679;CL:0000255!2.31e-09!679;CL:0000012!6.79e-09!682;CL:0000219!1.53e-08!390;CL:0000860!3.49e-08!45;CL:0002057!3.87e-08!42;CL:0002334!5.10e-08!12;CL:0002494!9.17e-08!16 | |ontology_enrichment_celltype=CL:0000055!4.68e-28!180;CL:0000048!6.68e-23!430;CL:0000723!1.11e-21!436;CL:0000034!2.88e-20!444;CL:0000057!8.95e-17!75;CL:0000680!1.19e-15!57;CL:0000056!1.19e-15!57;CL:0000355!1.19e-15!57;CL:0000183!1.08e-14!59;CL:0000187!1.37e-14!54;CL:0002371!6.56e-14!591;CL:0000393!7.43e-12!60;CL:0000211!7.43e-12!60;CL:0000192!1.26e-11!42;CL:0000514!1.26e-11!42;CL:0002320!1.52e-11!365;CL:0000144!1.91e-11!625;CL:0000134!2.28e-10!358;CL:0000359!6.24e-10!32;CL:0000548!2.31e-09!679;CL:0000004!2.31e-09!679;CL:0000255!2.31e-09!679;CL:0000012!6.79e-09!682;CL:0000219!1.53e-08!390;CL:0000860!3.49e-08!45;CL:0002057!3.87e-08!42;CL:0002334!5.10e-08!12;CL:0002494!9.17e-08!16 | ||
|ontology_enrichment_celltype_v019=CL:0000359;5.06e-11;32!CL:0002334;1.28e-10;12!CL:0000192;4.12e-10;43!CL:0000187;1.73e-09;55!CL:0000860;7.78e-09;33!CL:0002057;7.78e-09;33!CL:0002494;1.37e-08;16!CL:0000134;1.38e-07;55!CL:0000393;8.77e-07;61!CL:0000211;8.77e-07;61 | |ontology_enrichment_celltype_v019=CL:0000359;5.06e-11;32!CL:0002334;1.28e-10;12!CL:0000192;4.12e-10;43!CL:0000187;1.73e-09;55!CL:0000860;7.78e-09;33!CL:0002057;7.78e-09;33!CL:0002494;1.37e-08;16!CL:0000134;1.38e-07;55!CL:0000393;8.77e-07;61!CL:0000211;8.77e-07;61 | ||
|ontology_enrichment_celltype_v019_2=CL:0000048,6.87e-26,427;CL:0000723,1.25e-24,433;CL:0000034,5.12e-23,441;CL:0000680,1.26e-16,58;CL:0000056,1.26e-16,58;CL:0000355,1.26e-16,58;CL:0000057,1.16e-15,76;CL:0000187,3.08e-15,55;CL:0002320,1.13e-13,361;CL:0000134,1.03e-12,354;CL:0000192,1.08e-12,43;CL:0000514,1.08e-12,43;CL:0000393,2.75e-12,61;CL:0000211,2.75e-12,61;CL:0000359,1.26e-11,32;CL:0002334,1.72e-10,12;CL:0000219,2.14e-09,386;CL:0002494,1.47e-08,16 | |||
|ontology_enrichment_development_v019=CL:0000514;4.12e-10;43!CL:0000355;7.29e-09;58 | |ontology_enrichment_development_v019=CL:0000514;4.12e-10;43!CL:0000355;7.29e-09;58 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;4.18e-09;14 | |ontology_enrichment_disease_v019=DOID:2394;4.18e-09;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,4.80e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0002204!2.57e-16!167;UBERON:0004290!2.19e-15!70;UBERON:0000914!1.28e-14!83;UBERON:0002329!1.28e-14!83;UBERON:0003077!1.28e-14!83;UBERON:0003059!1.28e-14!83;UBERON:0007282!1.28e-14!83;UBERON:0009618!1.28e-14!83;UBERON:0007285!1.28e-14!83;UBERON:0001134!3.39e-14!61;UBERON:0002036!3.39e-14!61;UBERON:0003082!3.39e-14!61;UBERON:0002385!9.42e-14!63;UBERON:0001015!9.42e-14!63;UBERON:0000383!9.42e-14!63;UBERON:0002384!6.60e-12!375;UBERON:0000486!9.07e-12!82;UBERON:0000926!4.90e-11!448;UBERON:0004120!4.90e-11!448;UBERON:0006603!4.90e-11!448;UBERON:0005256!7.90e-09!143;UBERON:0000948!2.58e-08!24;UBERON:0005498!2.58e-08!24;UBERON:0004140!2.58e-08!24;UBERON:0009881!2.58e-08!24;UBERON:0004141!2.58e-08!24;UBERON:0003084!2.58e-08!24;UBERON:0007005!2.58e-08!24;UBERON:0004139!2.58e-08!24;UBERON:0004291!2.58e-08!24;UBERON:0004573!3.66e-08!33;UBERON:0004571!3.66e-08!33;UBERON:0001637!3.98e-08!42;UBERON:0003509!3.98e-08!42;UBERON:0004572!3.98e-08!42;UBERON:0007100!7.86e-08!27;UBERON:0004872!1.74e-07!84 | |ontology_enrichment_uberon=UBERON:0002204!2.57e-16!167;UBERON:0004290!2.19e-15!70;UBERON:0000914!1.28e-14!83;UBERON:0002329!1.28e-14!83;UBERON:0003077!1.28e-14!83;UBERON:0003059!1.28e-14!83;UBERON:0007282!1.28e-14!83;UBERON:0009618!1.28e-14!83;UBERON:0007285!1.28e-14!83;UBERON:0001134!3.39e-14!61;UBERON:0002036!3.39e-14!61;UBERON:0003082!3.39e-14!61;UBERON:0002385!9.42e-14!63;UBERON:0001015!9.42e-14!63;UBERON:0000383!9.42e-14!63;UBERON:0002384!6.60e-12!375;UBERON:0000486!9.07e-12!82;UBERON:0000926!4.90e-11!448;UBERON:0004120!4.90e-11!448;UBERON:0006603!4.90e-11!448;UBERON:0005256!7.90e-09!143;UBERON:0000948!2.58e-08!24;UBERON:0005498!2.58e-08!24;UBERON:0004140!2.58e-08!24;UBERON:0009881!2.58e-08!24;UBERON:0004141!2.58e-08!24;UBERON:0003084!2.58e-08!24;UBERON:0007005!2.58e-08!24;UBERON:0004139!2.58e-08!24;UBERON:0004291!2.58e-08!24;UBERON:0004573!3.66e-08!33;UBERON:0004571!3.66e-08!33;UBERON:0001637!3.98e-08!42;UBERON:0003509!3.98e-08!42;UBERON:0004572!3.98e-08!42;UBERON:0007100!7.86e-08!27;UBERON:0004872!1.74e-07!84 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;6.51e-09;33!UBERON:0004571;6.51e-09;33!UBERON:0000948;3.38e-08;22!UBERON:0001013;1.50e-07;14!UBERON:0007100;3.12e-07;25!UBERON:0004457;3.21e-07;9!UBERON:0000042;3.21e-07;9!UBERON:0001637;4.26e-07;42!UBERON:0003509;4.26e-07;42!UBERON:0004572;4.26e-07;42 | |ontology_enrichment_uberon_v019=UBERON:0004573;6.51e-09;33!UBERON:0004571;6.51e-09;33!UBERON:0000948;3.38e-08;22!UBERON:0001013;1.50e-07;14!UBERON:0007100;3.12e-07;25!UBERON:0004457;3.21e-07;9!UBERON:0000042;3.21e-07;9!UBERON:0001637;4.26e-07;42!UBERON:0003509;4.26e-07;42!UBERON:0004572;4.26e-07;42 | ||
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|phase1_expression=2.90685406832891,0.856402095563933,7.61153782118244,10.007329835313,7.15137751083661,27.0424942471114,5.06599756336621,8.84407822797563,5.74608382039645,4.42321085702716,3.48900583986214,0,0.527533956456907,1.73272894144065,4.97096063591874,2.6893005858071,3.61616716814386,1.46062018077475,2.43966399395253,0.61560529038394,1.22400414746552,0.940364164434263,0.286235987131057,0.273748850145768,0.251085279189606,0.305653622991805,0.0821005894499457,0.236132343941038,0,0,0.619264493264304,2.75826367343678,0.6024118375565,1.84877005083394,0,0,0,0.553995408531877,0.601633342410425,0.651032612147555,0.447830948479849,0.32389366601898,0.257575567634187,3.19876125315042,2.26725566213286,3.63876091781724,7.20530014407622,6.16751832032739,1.23882548358041,6.90461741573161,1.2808035326455,0.709446689665756,5.5159308917859,0.645484683583826,2.70852973188684,8.84738995850242,4.36649840092553,3.14612878223118,19.5893691117378,3.85114832491312,8.95071976118658,2.63881040149373,1.99463657621632,1.27867425159808,7.2552309657146,5.6738522469114,5.60540024096017,3.26623264833766,3.65038042894141,0.868755378820466,8.47559303686716,2.57794345191295,0.949387162322653,0.422510572623884,0,0.209658645508376,0.336985893439485,0.450530678524519,0.32145117339416,0.570025487482497,0.59675003159727,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.25618263945135,0.260118695119756,0.657751618414705,1.38175008892924,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,9.75227465255847,24.8159318090345,3.19656404608826,6.86734389530676,1.00267582127178,4.49024208778554,4.7717156823066,2.43317435151318,0.283604451492204,0.665188192387692,1.14185221401064,0,0,0.741568885568859,0,0,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0.208994966536811,0.258416759169329,1.06729878806013,0.33472061276467,0,0.760272105718513,0.488124115096339,0.367663080345869,0.81014194788176,0,0,0.112611480483322,0,0,0.183201743930407,0,0,0,21.3697939228987,1.77282716330412,1.72131935057184,18.0707071071753,6.38403087957043,0.560677600142307,4.2699598291882,0.98667019366864,8.09148692039392,3.3677668017422,9.15386657435369,0.454072282934794,0.576175924479999,0.234321431833797,5.61888138294577,3.4228309292667,9.41526687476347,0.822041490506354,0.485618833104395,0.98315564691574,0.61246251376468,0.368502951935304,0.826606249406124,1.18800285728205,3.95627086845691,1.82032272387605,13.6537446945085,0.168336113954066,0.750711119231785,0.831192346452549,3.07284334616587,3.67785354958824,2.85452311922534,1.47461838108027,13.9923915837312,1.92201649936711,1.69545520927649,11.1033705551229,1.44273540933814,6.95629458123199,1.11670113798954,3.03797398034279,0.68205903612839,6.56327813034698,1.19664868234989,2.7479829659198,8.16522062788213,0.604512589365842,1.3564847384839,0.193260853163297,0,0,0.121973706129595,0,0.116193942869518,0.207322110030741,0.504641701751257,0,3.12899064659632,2.57296375277154,0,2.3218396401599,4.33127689001751,0.236613600079688,0.505754070234305,1.20505514941741,0.661763836394364,0.653638332277218,1.42362371466658,1.07865046528132,1.76599318612811,3.07797725557112,0,2.80483547606892,2.4694440679884,2.94017422771084,0,0.982827216677626,2.36315962672562,0,0,5.66173773985134,0.109750285408626,0,0.402115889646523,0.370353780634118,0.325808305310325,5.19967392639789,0,0.34779121492523,2.34817388471643,0,0.462985512576611,0.570762456703795,0,0,0.246217006087397,0.234004265139238,1.0404181360211,0,0,0,0.268675568108545,0.581267877027924,0.383382679165211,0,0.176096868026452,0,0.432359860250884,0.12624243342638,0.253991577168676,0.381988425558278,0,3.4214489204541,1.23392991243988,0.600686115687835,0.285826432630578,0.224262168690721,2.1798003441664,0.5867062865676,8.14411809274,3.57656445851882,24.513779824124,1.59562869950922,3.12022310734098,0.514414748524284,5.67396528093113,3.19706614819319,1.42977993658148,2.71310802695722,0,0.977208552881205,0.710783897485092,5.543663110534,0,2.61460037580088,2.39935178836937,0,1.50677127429638,0,0.239624855491583,1.14861935834114,4.27910715122155,3.04040744001916,6.78071864416265,2.32779252211864,0.112085143993527,0,0,0.128343036279748,0.76228387266739,1.30139853857622,0,0,0.637938751653163,0.749007023947182,0,0,0.858840442033979,13.0044335475516,1.08506009479894,3.74347550755453,3.21172179834891,1.73472656537328,9.01988895443892,6.92176029373754,18.1926003244788,6.2083842775503,0.664225598535437,0.368738337083406,1.56390506042549,0.979005787313703,1.02943027143257,0,0.215714200818617,0.320182673410333,0.303127571446259,0,0.30239029332968,12.9016060065764,6.90578879796281,6.73584226639377,24.9871341048617,17.3980464682679,21.2327175909562,25.2310712956485,5.08891989548763,11.186388694727,1.14978018419333,10.3850885836724,7.43746422143739,0,0.40101294060657,2.30202472339741,6.08516575272416,6.55528204824181,12.8501926660236,0,0.0770153371044148,0,0,0.211103257785751,0,1.1906559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| ||
|short_description=p@chrX:47446039..47446094,+ | |short_description=p@chrX:47446039..47446094,+ | ||
}} | }} |
Latest revision as of 08:25, 1 August 2015
Short description: | p@chrX:47446039..47446094, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:47446039..47446094, + |
Coexpression cluster: | C609_Smooth_mesenchymal_Preadipocyte_Cardiac_Fibroblast_Osteoblast_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 6.87e-26 | 427 |
somatic stem cell | 1.25e-24 | 433 |
stem cell | 5.12e-23 | 441 |
muscle precursor cell | 1.26e-16 | 58 |
myoblast | 1.26e-16 | 58 |
multi-potent skeletal muscle stem cell | 1.26e-16 | 58 |
fibroblast | 1.16e-15 | 76 |
muscle cell | 3.08e-15 | 55 |
connective tissue cell | 1.13e-13 | 361 |
mesenchymal cell | 1.03e-12 | 354 |
smooth muscle cell | 1.08e-12 | 43 |
smooth muscle myoblast | 1.08e-12 | 43 |
electrically responsive cell | 2.75e-12 | 61 |
electrically active cell | 2.75e-12 | 61 |
vascular associated smooth muscle cell | 1.26e-11 | 32 |
preadipocyte | 1.72e-10 | 12 |
motile cell | 2.14e-09 | 386 |
cardiocyte | 1.47e-08 | 16 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.80e-09 | 14 |