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FFCP PHASE1:Mm9::chr19:46632787..46632823,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr19:46632787..46632823,-
|DHSsupport=NA
|short_description=p@chr19:46632787..46632823,-
|DPIdataset=NA
|description=CAGE_peak_at_chr19:46632787..46632823,-
|association_with_transcript=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=1296
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|cluster_id=chr19:46632787..46632823,-
|description=CAGE_peak_at_chr19:46632787..46632823,-
|id=chr19:46632787..46632823,-
|ontology_enrichment_celltype=CL:0002319!2.31e-11!43;CL:0000055!9.67e-11!50;CL:0000221!1.21e-10!44;CL:0000133!1.21e-10!44;CL:0000117!3.99e-10!23;CL:0000337!3.99e-10!23;CL:0000393!3.48e-08!39;CL:0000211!3.48e-08!39;CL:0000540!4.11e-08!33;CL:0000047!4.11e-08!33;CL:0000031!4.11e-08!33;CL:0000404!4.11e-08!33
|ontology_enrichment_celltype_v019_2=CL:0000117,2.85e-16,23;CL:0000337,2.85e-16,23;CL:0002319,1.37e-12,43;CL:0000221,3.34e-12,44;CL:0000133,3.34e-12,44;CL:0000540,2.59e-10,33;CL:0000047,2.59e-10,33;CL:0000031,2.59e-10,33;CL:0000404,2.59e-10,33;CL:0000393,1.38e-09,39;CL:0000211,1.38e-09,39;CL:0002614,3.29e-08,3;CL:0002321,7.70e-08,70;CL:0002610,2.41e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!3.51e-24!73;UBERON:0005743!3.51e-24!73;UBERON:0000073!8.60e-24!75;UBERON:0001016!8.60e-24!75;UBERON:0001049!5.58e-20!52;UBERON:0005068!5.58e-20!52;UBERON:0006241!5.58e-20!52;UBERON:0007135!5.58e-20!52;UBERON:0000955!2.25e-19!50;UBERON:0006238!2.25e-19!50;UBERON:0002616!5.15e-19!49;UBERON:0000033!1.21e-18!63;UBERON:0004121!1.27e-18!102;UBERON:0000924!1.27e-18!102;UBERON:0006601!1.27e-18!102;UBERON:0002346!3.30e-18!71;UBERON:0003075!3.30e-18!71;UBERON:0007284!3.30e-18!71;UBERON:0003056!2.94e-16!49;UBERON:0003080!1.68e-15!40;UBERON:0002780!4.79e-15!39;UBERON:0001890!4.79e-15!39;UBERON:0006240!4.79e-15!39;UBERON:0002020!9.88e-15!34;UBERON:0002791!1.68e-12!29;UBERON:0003528!1.68e-12!29;UBERON:0001893!1.68e-12!29;UBERON:0000153!6.94e-10!94;UBERON:0000025!7.08e-10!114;UBERON:0007811!7.68e-10!86;UBERON:0004111!4.48e-09!122;UBERON:0000956!1.87e-08!21;UBERON:0001869!1.87e-08!21;UBERON:0000203!1.87e-08!21;UBERON:0002021!3.20e-07!10;UBERON:0000411!3.20e-07!10;UBERON:0001950!3.20e-07!10;UBERON:0002619!4.42e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.25e-22,73;UBERON:0001016,3.20e-21,75;UBERON:0000073,6.45e-20,54;UBERON:0002020,1.53e-19,34;UBERON:0001049,5.85e-17,52;UBERON:0005068,5.85e-17,52;UBERON:0006241,5.85e-17,52;UBERON:0007135,5.85e-17,52;UBERON:0002021,6.12e-17,10;UBERON:0000411,6.12e-17,10;UBERON:0001950,6.12e-17,10;UBERON:0003528,1.78e-16,29;UBERON:0002791,1.78e-16,29;UBERON:0001893,1.78e-16,29;UBERON:0004121,3.43e-15,95;UBERON:0000924,3.43e-15,95;UBERON:0006601,3.43e-15,95;UBERON:0002780,2.60e-14,39;UBERON:0001890,2.60e-14,39;UBERON:0006240,2.60e-14,39;UBERON:0003080,7.66e-14,40;UBERON:0002616,5.14e-13,46;UBERON:0002346,1.04e-12,64;UBERON:0003075,1.04e-12,64;UBERON:0007284,1.04e-12,64;UBERON:0000955,1.23e-12,47;UBERON:0006238,1.23e-12,47;UBERON:0003056,1.73e-10,49;UBERON:0010371,1.87e-10,73;UBERON:0002420,9.68e-10,8;UBERON:0007245,9.68e-10,8;UBERON:0010009,9.68e-10,8;UBERON:0010011,9.68e-10,8;UBERON:0000454,9.68e-10,8;UBERON:0002619,3.30e-09,17;UBERON:0000956,5.86e-09,21;UBERON:0001869,5.86e-09,21;UBERON:0000203,5.86e-09,21;UBERON:0002038,3.29e-08,3;UBERON:0009663,3.29e-08,3;UBERON:0009661,3.29e-08,3;UBERON:0000125,3.29e-08,3;UBERON:0002308,3.29e-08,3;UBERON:0010314,4.68e-08,92;UBERON:0004684,2.41e-07,3;UBERON:0002275,2.41e-07,3
|phase1_expression=0.640595388419176,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0.171217968225505,0.0797721589953364,0,0.0874204024189974,0,0.202475267389826,0.699561878128147,0,0.137114433605739,0,0.510259740906419,0.397163804803541,0.522399578277871,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0.183546752161682,0.782391344348039,2.18025156380447,0.878744730937887,0.972149495371417,1.95980990275508,1.43752564364972,0,0.725362142011344,0,0.771778308107841,0.286533439938757,2.06268836910977,1.41621522601718,3.70293685490423,0.633831403506179,0,0,1.3498495759221,1.97773272513395,1.4209602298922,0.599200221036809,2.30530983192933,0.414758449233911,3.37514845829227,0.841299845405528,0.571301968807607,1.98781686856452,0.122490799214954,0.958454710182364,0,2.20231761998777,2.17068474744819,2.15049146558741,0.923204014111357,2.01272815925301,2.08365348222704,3.90856198601933,6.75315132038016,3.0559649555362,1.47314292736834,2.98980529678116,0.559198337475902,0.37863096666592,0.151143120213571,0.289864488701678,0,0,0,0,0.448026887097336,0.140444420131752,0.511290967734173,1.81850203222008,2.12003744706204,0,0,0,0,0.865964164044856,0.253359865475099,1.01104889002957,0,0,0.148442139064825,0.346970653532272,0.304465478312141,0.230615497256059,0.301445281105245,0.117588707135705,0.376999773989026,0.247194967734374,0.144599356919912,0,0,0,0.484875253135222,0,0.585561594023094,0.628340120440365,0,0.239630249011841,0,0,0.898743836428936,1.37250180845588,0.376963056338593,0.695297280769106,0,0.62336413367868,0.648965052271031,0.203678727700633,0.124406970610093,0.505445516867349,0.420883711772948,0.520481771850815,0.919608417733892,0.180062129805349,0.30140963567143,0.272145996605311,0.640568601424249,0.468508622798644,0.517406741478031,0.215567992932842,0.945530400839096,0.175951124163949,0.43839146485515,0.834141747676794,0,0.61734640922383,0.398068533636986,0,0,0,0.207125772535502,0.234526059981096,0.720248245844059,0.23674473558521,0.196764231747404,0.771335564436891,0,0.268273401399619,0.350296027101508,0.329119699826961,0.32833492815819,0.243206428637567,0.438599962275997,0.439100230582101,0.402619256281115,0.420579897128254,0.823236899034275,0,0,0,0.928946687441754,0,0,0.444756087689741,0.190225626112559,0,0.164698954724011,0,0,0,0,0,0,0.189667900953082,0.571242563048644,0,0.407302655690628,0.387904974335251,0.210407459670956,0.316182685621286,0.590440591918409,0.470996183524124,0,0,0.333690211432188,0,0,0,0,0,0,0,0.549122826376163,1.43768206527355,0,0.624075346229121,0.252578877947112,0,0,0,0,0.162964976442026,0.339490171550376,0.469380496577004,0.335012514883631,0.238043640886014,0.195133647857799,0.157635144106191,0.44292937929755,0.159454768657487,0.163863314715738,0.345369963731791,0.289298117163023,1.50791283939272,0,0,0,0.160550589987792,0.820481806145422,0.327869890753351,0.252470927204373,0,0,0.430846795465598,0,0.222798674082394,0.283076530788832,0.404810701674894,0.876767573733936,0.395287777946524,0.642642632843614,0.141940085208269,0.35613120733451,0.162886959353576,0.164970122972535,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0,0,0,0,0.316036757935816,0,0,0.340439605753788,0.540183282093931,0.388076051348264,0.857348140126369,0.354680467284547,1.07021290561242,1.48094118541909,0.913394847343798,0,0,0,0.16488625294148,0,0.180938774784468,0,0,0,1.11255181206306,0,0,0.185194527369712,0,0.136694227721025,0,0,0,0,0,0.474503990371703,0,0.216010681643603,0.418176592028937,0.218362563746178,0.539457385539283,0,0,0,0,6.20062232552609,0,0.330916980914195,0.194451188344048,0.258319646955462,0.844780627453891,0.234714477291508,0.39061315453185,0.209718688851422,3.14059357073808,2.01621004380506,0,0.405450430580328,0.513554785824136,0.25984164595559,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0.15241361331,0.100826185136841,0.194915761479505,0.0962118416403295,0,0.226730383615211,0,0.179427713218951,0,0.579568782096571,0,0.73260649706906,0,0.501572104035363,2.82375921308533,3.22227665555024,0.572895513439397,1.54667864109319,2.74033007908257,3.0215755895588,2.02506750069542,2.70192721934532,1.35942722695261,4.14208249401456,0.518936737920883,0.399024873401031,0.512200817262403,0,0.209613162627982,0.367687016900028,0.666740183404846,0.412070114477788,0.64183841918363,0.252697211763798,0,0.565879024158229,0.561849044819294,0.128050304809739,0.0574354689556133,0.476293691283074,0.231768651889711,0.578727661391115,0.412085900803307,0.441596760403192,0,0.177475806159338,0.715308569841963,0.872078499793971,0.188218760830661,0.507687647350059,0.365855945745545,0.263069711437843,0.543216455383447,0.561142271657738,0.237270036248348,0.29551344712669,0,0.154936841185966,0.192906610981141,0,0.467863216890817,0,0.191288332068843,0.220591419119515,0
|phase1_expression=0.640595388419176,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0.171217968225505,0.0797721589953364,0,0.0874204024189974,0,0.202475267389826,0.699561878128147,0,0.137114433605739,0,0.510259740906419,0.397163804803541,0.522399578277871,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0.183546752161682,0.782391344348039,2.18025156380447,0.878744730937887,0.972149495371417,1.95980990275508,1.43752564364972,0,0.725362142011344,0,0.771778308107841,0.286533439938757,2.06268836910977,1.41621522601718,3.70293685490423,0.633831403506179,0,0,1.3498495759221,1.97773272513395,1.4209602298922,0.599200221036809,2.30530983192933,0.414758449233911,3.37514845829227,0.841299845405528,0.571301968807607,1.98781686856452,0.122490799214954,0.958454710182364,0,2.20231761998777,2.17068474744819,2.15049146558741,0.923204014111357,2.01272815925301,2.08365348222704,3.90856198601933,6.75315132038016,3.0559649555362,1.47314292736834,2.98980529678116,0.559198337475902,0.37863096666592,0.151143120213571,0.289864488701678,0,0,0,0,0.448026887097336,0.140444420131752,0.511290967734173,1.81850203222008,2.12003744706204,0,0,0,0,0.865964164044856,0.253359865475099,1.01104889002957,0,0,0.148442139064825,0.346970653532272,0.304465478312141,0.230615497256059,0.301445281105245,0.117588707135705,0.376999773989026,0.247194967734374,0.144599356919912,0,0,0,0.484875253135222,0,0.585561594023094,0.628340120440365,0,0.239630249011841,0,0,0.898743836428936,1.37250180845588,0.376963056338593,0.695297280769106,0,0.62336413367868,0.648965052271031,0.203678727700633,0.124406970610093,0.505445516867349,0.420883711772948,0.520481771850815,0.919608417733892,0.180062129805349,0.30140963567143,0.272145996605311,0.640568601424249,0.468508622798644,0.517406741478031,0.215567992932842,0.945530400839096,0.175951124163949,0.43839146485515,0.834141747676794,0,0.61734640922383,0.398068533636986,0,0,0,0.207125772535502,0.234526059981096,0.720248245844059,0.23674473558521,0.196764231747404,0.771335564436891,0,0.268273401399619,0.350296027101508,0.329119699826961,0.32833492815819,0.243206428637567,0.438599962275997,0.439100230582101,0.402619256281115,0.420579897128254,0.823236899034275,0,0,0,0.928946687441754,0,0,0.444756087689741,0.190225626112559,0,0.164698954724011,0,0,0,0,0,0,0.189667900953082,0.571242563048644,0,0.407302655690628,0.387904974335251,0.210407459670956,0.316182685621286,0.590440591918409,0.470996183524124,0,0,0.333690211432188,0,0,0,0,0,0,0,0.549122826376163,1.43768206527355,0,0.624075346229121,0.252578877947112,0,0,0,0,0.162964976442026,0.339490171550376,0.469380496577004,0.335012514883631,0.238043640886014,0.195133647857799,0.157635144106191,0.44292937929755,0.159454768657487,0.163863314715738,0.345369963731791,0.289298117163023,1.50791283939272,0,0,0,0.160550589987792,0.820481806145422,0.327869890753351,0.252470927204373,0,0,0.430846795465598,0,0.222798674082394,0.283076530788832,0.404810701674894,0.876767573733936,0.395287777946524,0.642642632843614,0.141940085208269,0.35613120733451,0.162886959353576,0.164970122972535,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0,0,0,0,0.316036757935816,0,0,0.340439605753788,0.540183282093931,0.388076051348264,0.857348140126369,0.354680467284547,1.07021290561242,1.48094118541909,0.913394847343798,0,0,0,0.16488625294148,0,0.180938774784468,0,0,0,1.11255181206306,0,0,0.185194527369712,0,0.136694227721025,0,0,0,0,0,0.474503990371703,0,0.216010681643603,0.418176592028937,0.218362563746178,0.539457385539283,0,0,0,0,6.20062232552609,0,0.330916980914195,0.194451188344048,0.258319646955462,0.844780627453891,0.234714477291508,0.39061315453185,0.209718688851422,3.14059357073808,2.01621004380506,0,0.405450430580328,0.513554785824136,0.25984164595559,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0.15241361331,0.100826185136841,0.194915761479505,0.0962118416403295,0,0.226730383615211,0,0.179427713218951,0,0.579568782096571,0,0.73260649706906,0,0.501572104035363,2.82375921308533,3.22227665555024,0.572895513439397,1.54667864109319,2.74033007908257,3.0215755895588,2.02506750069542,2.70192721934532,1.35942722695261,4.14208249401456,0.518936737920883,0.399024873401031,0.512200817262403,0,0.209613162627982,0.367687016900028,0.666740183404846,0.412070114477788,0.64183841918363,0.252697211763798,0,0.565879024158229,0.561849044819294,0.128050304809739,0.0574354689556133,0.476293691283074,0.231768651889711,0.578727661391115,0.412085900803307,0.441596760403192,0,0.177475806159338,0.715308569841963,0.872078499793971,0.188218760830661,0.507687647350059,0.365855945745545,0.263069711437843,0.543216455383447,0.561142271657738,0.237270036248348,0.29551344712669,0,0.154936841185966,0.192906610981141,0,0.467863216890817,0,0.191288332068843,0.220591419119515,0
|short_description=p@chr19:46632787..46632823,-
}}
}}

Latest revision as of 05:52, 4 August 2015

Short description:p@chr19:46632787..46632823, -
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr19:46632787..46632823, -
Coexpression cluster:MCL_coexpression_mm9:1296
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chr19:46632787..46632823-

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.18
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.96
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.38
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.96
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.17
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.01
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.91
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.75
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.06
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.12
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.90
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B20.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.82
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.82
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.11
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G56.20
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H33.14
testis, neonate N30.CNhs11130.1391-42E22.02
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.55
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system5.25e-2273
nervous system3.20e-2175
regional part of nervous system6.45e-2054
gray matter1.53e-1934
neural tube5.85e-1752
neural rod5.85e-1752
future spinal cord5.85e-1752
neural keel5.85e-1752
occipital lobe6.12e-1710
visual cortex6.12e-1710
neocortex6.12e-1710
brain grey matter1.78e-1629
regional part of telencephalon1.78e-1629
telencephalon1.78e-1629
ectoderm-derived structure3.43e-1595
ectoderm3.43e-1595
presumptive ectoderm3.43e-1595
regional part of forebrain2.60e-1439
forebrain2.60e-1439
future forebrain2.60e-1439
anterior neural tube7.66e-1440
regional part of brain5.14e-1346
neurectoderm1.04e-1264
neural plate1.04e-1264
presumptive neural plate1.04e-1264
brain1.23e-1247
future brain1.23e-1247
pre-chordal neural plate1.73e-1049
ecto-epithelium1.87e-1073
basal ganglion9.68e-108
nuclear complex of neuraxis9.68e-108
aggregate regional part of brain9.68e-108
collection of basal ganglia9.68e-108
cerebral subcortex9.68e-108
regional part of cerebral cortex3.30e-0917
cerebral cortex5.86e-0921
cerebral hemisphere5.86e-0921
pallium5.86e-0921
substantia nigra3.29e-083
telencephalic nucleus3.29e-083
midbrain nucleus3.29e-083
neural nucleus3.29e-083
nucleus of brain3.29e-083
structure with developmental contribution from neural crest4.68e-0892
raphe nuclei2.41e-073
reticular formation2.41e-073
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