FFCP PHASE1:Mm9::chr2:152857721..152857750,+: Difference between revisions
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{{FFCP|EntrezGene=228787|HGNC=|MCL_coexpression_id=367|UniProt=Q5GH64|association_with_transcript=133bp_to_ENSMUST00000037235,NM_001011732,uc008nha.1_5end|description=CAGE_peak_1_at_Xkr7_5end|id=chr2:152857721..152857750,+|ontology_enrichment_celltype=CL:0000540!2.71e-16!33;CL:0000047!2.71e-16!33;CL:0000031!2.71e-16!33;CL:0000404!2.71e-16!33;CL:0000117!1.92e-15!23;CL:0000337!1.92e-15!23;CL:0000393!1.95e-11!39;CL:0000211!1.95e-11!39;CL:0000221!2.07e-11!44;CL:0000133!2.07e-11!44;CL:0002319!2.83e-11!43;CL:0000055!1.06e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,3.20e-19,23;CL:0000337,3.20e-19,23;CL:0000540,1.52e-17,33;CL:0000047,1.52e-17,33;CL:0000031,1.52e-17,33;CL:0000404,1.52e-17,33;CL:0000393,3.74e-13,39;CL:0000211,3.74e-13,39;CL:0002319,5.82e-11,43;CL:0000221,1.75e-10,44;CL:0000133,1.75e-10,44;CL:0002609,6.58e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!3.77e-33!71;UBERON:0003075!3.77e-33!71;UBERON:0007284!3.77e-33!71;UBERON:0004121!8.32e-31!102;UBERON:0000924!8.32e-31!102;UBERON:0006601!8.32e-31!102;UBERON:0001017!2.66e-28!73;UBERON:0005743!2.66e-28!73;UBERON:0000073!4.09e-28!75;UBERON:0001016!4.09e-28!75;UBERON:0000033!2.12e-26!63;UBERON:0001049!8.48e-25!52;UBERON:0005068!8.48e-25!52;UBERON:0006241!8.48e-25!52;UBERON:0007135!8.48e-25!52;UBERON:0003056!3.23e-24!49;UBERON:0000955!1.33e-22!50;UBERON:0006238!1.33e-22!50;UBERON:0002616!4.86e-22!49;UBERON:0003080!4.54e-19!40;UBERON:0002780!1.51e-18!39;UBERON:0001890!1.51e-18!39;UBERON:0006240!1.51e-18!39;UBERON:0002020!1.19e-16!34;UBERON:0002791!2.58e-13!29;UBERON:0003528!2.58e-13!29;UBERON:0001893!2.58e-13!29;UBERON:0007811!3.41e-12!86;UBERON:0000153!1.35e-09!94;UBERON:0000956!5.74e-09!21;UBERON:0001869!5.74e-09!21;UBERON:0000203!5.74e-09!21|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.21e-36,64;UBERON:0003075,1.21e-36,64;UBERON:0007284,1.21e-36,64;UBERON:0001017,6.19e-32,73;UBERON:0000073,5.77e-31,54;UBERON:0001016,1.79e-30,75;UBERON:0010371,2.50e-30,73;UBERON:0004121,3.16e-30,95;UBERON:0000924,3.16e-30,95;UBERON:0006601,3.16e-30,95;UBERON:0003056,6.72e-30,49;UBERON:0001049,7.31e-30,52;UBERON:0005068,7.31e-30,52;UBERON:0006241,7.31e-30,52;UBERON:0007135,7.31e-30,52;UBERON:0000955,1.75e-25,47;UBERON:0006238,1.75e-25,47;UBERON:0002616,8.77e-25,46;UBERON:0010314,2.50e-24,92;UBERON:0003080,2.34e-23,40;UBERON:0002780,1.07e-22,39;UBERON:0001890,1.07e-22,39;UBERON:0006240,1.07e-22,39;UBERON:0002020,2.74e-21,34;UBERON:0003528,5.18e-17,29;UBERON:0002791,5.18e-17,29;UBERON:0001893,5.18e-17,29;UBERON:0000956,1.89e-11,21;UBERON:0001869,1.89e-11,21;UBERON:0000203,1.89e-11,21;UBERON:0002619,2.08e-08,17;UBERON:0000970,3.60e-07,9;UBERON:0000019,3.60e-07,9;UBERON:0000047,3.60e-07,9;UBERON:0010312,3.60e-07,9;UBERON:0004088,3.60e-07,9;UBERON:0002104,3.60e-07,9;UBERON:0001456,3.60e-07,9;UBERON:0003072,3.60e-07,9;UBERON:0004128,3.60e-07,9;UBERON:0003071,3.60e-07,9;UBERON:0003076,6.19e-07,12;UBERON:0003057,6.19e-07,12;UBERON:0002420,6.77e-07,8;UBERON:0007245,6.77e-07,8;UBERON:0010009,6.77e-07,8;UBERON:0010011,6.77e-07,8;UBERON:0000454,6.77e-07,8|phase1_expression=1.12104192973356,0,0,0,0,0.839396359559449,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0.261199789138935,0.159992422793407,0,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0.872100625521786,0,0,0.139986421625363,0,0.167782606057736,0,0.336093799142464,0,0,0,18.4107979382234,21.6886301501533,16.4796164911607,0,0,0,0,0,0,0,14.7239249478038,15.3906769698127,16.1950220240564,11.4260393761521,6.40518768759679,13.8414603112898,12.8432931164437,12.8690630125403,8.8092704799511,1.91531007127782,2.15049146558741,19.5191705840687,15.3699241252048,15.6274011167028,4.18774498502071,1.68828783009504,2.29197371665215,8.83885756421003,8.39992916714707,17.8943467992289,0.302904773332736,0.151143120213571,0,0,0,0,0,0,0.421333260395256,0,0,0,0.985903938436763,0,0,0,0,0,0,0,0,2.3750742250372,2.94925055502431,2.13125834818499,0.691846491768175,1.80867168663147,2.11659672844269,0.628332956648377,0,0,0,0.161766849947409,0,0,0,22.5441213698891,27.0186251789357,0,0,0,0,3.2953940669061,3.20250421973039,16.5863744788981,2.43354048269187,4.85859368927628,3.94797284663164,3.89379031362618,0,0,0,2.31486041475121,1.04096354370163,5.51765050640335,5.40186389416048,4.9732589885786,8.02830689985669,8.83984669965463,9.18276900685342,10.3481348295606,0,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,1.47202963994889,15.4356918568927,0,0,0.213288250535234,0.464473343720877,0.515469845288373,1.00841762311671,0.444756087689741,0.190225626112559,0,0.329397909448022,0,0.198956472041151,0.58489226135736,0,0,0.199141273254367,0,0.342745537829186,0,0.407302655690628,0.581857461502877,0.0701358198903186,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0.714130922658041,0.195133647857799,0,0,0,0,0,0,0,0,0,0,2.72936002979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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:228787 | |||
|HGNC= | |||
|MCL_coexpression_id=367 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q5GH64 | |||
|association_with_transcript=133bp_to_ENSMUST00000037235,NM_001011732,uc008nha.1_5end | |||
|cluster_id=chr2:152857721..152857750,+ | |||
|description=CAGE_peak_1_at_Xkr7_5end | |||
|id=chr2:152857721..152857750,+ | |||
|ontology_enrichment_celltype=CL:0000540!2.71e-16!33;CL:0000047!2.71e-16!33;CL:0000031!2.71e-16!33;CL:0000404!2.71e-16!33;CL:0000117!1.92e-15!23;CL:0000337!1.92e-15!23;CL:0000393!1.95e-11!39;CL:0000211!1.95e-11!39;CL:0000221!2.07e-11!44;CL:0000133!2.07e-11!44;CL:0002319!2.83e-11!43;CL:0000055!1.06e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.20e-19,23;CL:0000337,3.20e-19,23;CL:0000540,1.52e-17,33;CL:0000047,1.52e-17,33;CL:0000031,1.52e-17,33;CL:0000404,1.52e-17,33;CL:0000393,3.74e-13,39;CL:0000211,3.74e-13,39;CL:0002319,5.82e-11,43;CL:0000221,1.75e-10,44;CL:0000133,1.75e-10,44;CL:0002609,6.58e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!3.77e-33!71;UBERON:0003075!3.77e-33!71;UBERON:0007284!3.77e-33!71;UBERON:0004121!8.32e-31!102;UBERON:0000924!8.32e-31!102;UBERON:0006601!8.32e-31!102;UBERON:0001017!2.66e-28!73;UBERON:0005743!2.66e-28!73;UBERON:0000073!4.09e-28!75;UBERON:0001016!4.09e-28!75;UBERON:0000033!2.12e-26!63;UBERON:0001049!8.48e-25!52;UBERON:0005068!8.48e-25!52;UBERON:0006241!8.48e-25!52;UBERON:0007135!8.48e-25!52;UBERON:0003056!3.23e-24!49;UBERON:0000955!1.33e-22!50;UBERON:0006238!1.33e-22!50;UBERON:0002616!4.86e-22!49;UBERON:0003080!4.54e-19!40;UBERON:0002780!1.51e-18!39;UBERON:0001890!1.51e-18!39;UBERON:0006240!1.51e-18!39;UBERON:0002020!1.19e-16!34;UBERON:0002791!2.58e-13!29;UBERON:0003528!2.58e-13!29;UBERON:0001893!2.58e-13!29;UBERON:0007811!3.41e-12!86;UBERON:0000153!1.35e-09!94;UBERON:0000956!5.74e-09!21;UBERON:0001869!5.74e-09!21;UBERON:0000203!5.74e-09!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.21e-36,64;UBERON:0003075,1.21e-36,64;UBERON:0007284,1.21e-36,64;UBERON:0001017,6.19e-32,73;UBERON:0000073,5.77e-31,54;UBERON:0001016,1.79e-30,75;UBERON:0010371,2.50e-30,73;UBERON:0004121,3.16e-30,95;UBERON:0000924,3.16e-30,95;UBERON:0006601,3.16e-30,95;UBERON:0003056,6.72e-30,49;UBERON:0001049,7.31e-30,52;UBERON:0005068,7.31e-30,52;UBERON:0006241,7.31e-30,52;UBERON:0007135,7.31e-30,52;UBERON:0000955,1.75e-25,47;UBERON:0006238,1.75e-25,47;UBERON:0002616,8.77e-25,46;UBERON:0010314,2.50e-24,92;UBERON:0003080,2.34e-23,40;UBERON:0002780,1.07e-22,39;UBERON:0001890,1.07e-22,39;UBERON:0006240,1.07e-22,39;UBERON:0002020,2.74e-21,34;UBERON:0003528,5.18e-17,29;UBERON:0002791,5.18e-17,29;UBERON:0001893,5.18e-17,29;UBERON:0000956,1.89e-11,21;UBERON:0001869,1.89e-11,21;UBERON:0000203,1.89e-11,21;UBERON:0002619,2.08e-08,17;UBERON:0000970,3.60e-07,9;UBERON:0000019,3.60e-07,9;UBERON:0000047,3.60e-07,9;UBERON:0010312,3.60e-07,9;UBERON:0004088,3.60e-07,9;UBERON:0002104,3.60e-07,9;UBERON:0001456,3.60e-07,9;UBERON:0003072,3.60e-07,9;UBERON:0004128,3.60e-07,9;UBERON:0003071,3.60e-07,9;UBERON:0003076,6.19e-07,12;UBERON:0003057,6.19e-07,12;UBERON:0002420,6.77e-07,8;UBERON:0007245,6.77e-07,8;UBERON:0010009,6.77e-07,8;UBERON:0010011,6.77e-07,8;UBERON:0000454,6.77e-07,8 | |||
|phase1_expression=1.12104192973356,0,0,0,0,0.839396359559449,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0.261199789138935,0.159992422793407,0,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0.872100625521786,0,0,0.139986421625363,0,0.167782606057736,0,0.336093799142464,0,0,0,18.4107979382234,21.6886301501533,16.4796164911607,0,0,0,0,0,0,0,14.7239249478038,15.3906769698127,16.1950220240564,11.4260393761521,6.40518768759679,13.8414603112898,12.8432931164437,12.8690630125403,8.8092704799511,1.91531007127782,2.15049146558741,19.5191705840687,15.3699241252048,15.6274011167028,4.18774498502071,1.68828783009504,2.29197371665215,8.83885756421003,8.39992916714707,17.8943467992289,0.302904773332736,0.151143120213571,0,0,0,0,0,0,0.421333260395256,0,0,0,0.985903938436763,0,0,0,0,0,0,0,0,2.3750742250372,2.94925055502431,2.13125834818499,0.691846491768175,1.80867168663147,2.11659672844269,0.628332956648377,0,0,0,0.161766849947409,0,0,0,22.5441213698891,27.0186251789357,0,0,0,0,3.2953940669061,3.20250421973039,16.5863744788981,2.43354048269187,4.85859368927628,3.94797284663164,3.89379031362618,0,0,0,2.31486041475121,1.04096354370163,5.51765050640335,5.40186389416048,4.9732589885786,8.02830689985669,8.83984669965463,9.18276900685342,10.3481348295606,0,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,1.47202963994889,15.4356918568927,0,0,0.213288250535234,0.464473343720877,0.515469845288373,1.00841762311671,0.444756087689741,0.190225626112559,0,0.329397909448022,0,0.198956472041151,0.58489226135736,0,0,0.199141273254367,0,0.342745537829186,0,0.407302655690628,0.581857461502877,0.0701358198903186,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0.714130922658041,0.195133647857799,0,0,0,0,0,0,0,0,0,0,2.72936002979246,2.93029216480508,0,0,0.94652465824877,1.17131623288992,2.36965737506079,0.238968797952552,1.11399337041197,1.41538265394416,0.809621403349789,2.33804686329049,1.18586333383957,3.85585579706168,0,0,0,0,0,3.15614827001476,1.51161778482376,0.188605079755898,2.06711325016541,0.614870295887855,1.29214146584111,1.81766864738753,0.712994756769443,0,0,1.03135543248187,10.2131881726136,0.720244376125241,1.94038025674132,4.28674070063185,12.5911565886014,8.56170324489939,7.56925494769756,13.0919928119278,0,0,0,0,0,0.120625849856312,0.119372344003136,0.164140899745061,0.291480836629851,2.41052892613663,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0.324016022465404,0,0.436725127492355,0.539457385539283,0.495920734352016,0,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0,0,0,0,0.13020438484395,0.104859344425711,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,5.0827665835536,5.06357760157895,7.44764167471216,3.26521046453006,2.74033007908257,1.5107877947794,2.02506750069542,2.70192721934532,2.26571204492102,5.1776031175182,0.93408612825759,2.79317411380722,3.07320490357441,1.94485373654635,2.93458427679175,2.5738091183002,2.00022055021454,1.85431551515005,1.92551525755089,2.02157769411038,2.02783439912192,3.01802146217722,1.77918864192777,2.36893063898016,2.01024141344646,4.28664322154766,1.85414921511769,1.92909220463705,3.29668720642645,2.64958056241915,3.42869252385415,2.12970967391205,2.14592570952589,3.19762116591123,2.35273451038327,2.36920902096694,2.19513567447327,1.8414879800649,2.30866993537965,5.05028044491965,2.25406534435931,2.1670986122624,1.63692417267876,2.16911577660352,1.35034627686799,7.99393849401427,1.87145286756327,1.93383948643468,0.191288332068843,0.661774257358546,0.231867835620421 | |||
|short_description=p1@Xkr7 | |||
}} |
Revision as of 07:11, 4 August 2015
Short description: | p1@Xkr7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Xkr7_5end |
Coexpression cluster: | MCL_coexpression_mm9:367 |
Association with transcript: | 133bp_to_ENSMUST00000037235, NM_001011732, uc008nha.1_5end |
EntrezGene: | 228787 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.20e-19 | 23 |
neuroblast (sensu Vertebrata) | 3.20e-19 | 23 |
neuron | 1.52e-17 | 33 |
neuronal stem cell | 1.52e-17 | 33 |
neuroblast | 1.52e-17 | 33 |
electrically signaling cell | 1.52e-17 | 33 |
electrically responsive cell | 3.74e-13 | 39 |
electrically active cell | 3.74e-13 | 39 |
neural cell | 5.82e-11 | 43 |
ectodermal cell | 1.75e-10 | 44 |
neurectodermal cell | 1.75e-10 | 44 |
neuron of cerebral cortex | 6.58e-07 | 6 |