FFCP PHASE1:Mm9::chr9:108955396..108955417,+: Difference between revisions
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{{FFCP|EntrezGene=66940|HGNC=|MCL_coexpression_id=122|UniProt=E9QB08|association_with_transcript=28bp_to_ENSMUST00000124432_5end|description=CAGE_peak_7_at_Shisa5_5end|id=chr9:108955396..108955417,+|ontology_enrichment_celltype=CL:0000838!4.52e-10!12;CL:0000084!2.84e-09!11;CL:0000827!2.84e-09!11;CL:0000542!6.65e-09!13;CL:0000051!6.65e-09!13;CL:0000791!1.87e-08!9;CL:0000789!1.87e-08!9;CL:0002420!1.87e-08!9;CL:0002419!1.87e-08!9;CL:0000790!1.87e-08!9;CL:0000624!1.52e-07!8;CL:0002031!3.65e-07!25|ontology_enrichment_celltype_v019_2=CL:0000838,5.00e-14,12;CL:0000791,2.41e-13,9;CL:0000789,2.41e-13,9;CL:0002420,2.41e-13,9;CL:0002419,2.41e-13,9;CL:0000790,2.41e-13,9;CL:0000542,1.03e-12,13;CL:0000051,1.03e-12,13;CL:0000084,1.10e-12,11;CL:0000827,1.10e-12,11;CL:0002031,1.87e-12,25;CL:0000624,8.62e-12,8;CL:0000738,5.11e-09,17;CL:0002087,5.11e-09,17;CL:0000893,8.69e-09,6;CL:0002489,8.69e-09,6;CL:0000898,8.69e-09,6;CL:0000809,8.69e-09,6;CL:0000810,8.69e-09,6;CL:0000895,8.69e-09,6;CL:0000808,8.69e-09,6;CL:0000894,8.69e-09,6;CL:0000806,8.69e-09,6;CL:0000807,8.69e-09,6;CL:0000805,8.69e-09,6;CL:0002425,8.69e-09,6;CL:0002436,8.69e-09,6;CL:0002427,8.69e-09,6;CL:0002428,8.69e-09,6;CL:0002429,8.69e-09,6;CL:0002433,8.69e-09,6;CL:0002431,8.69e-09,6;CL:0002432,8.69e-09,6;CL:0000988,1.01e-08,32;CL:0002032,1.01e-08,32;CL:0000037,1.01e-08,32;CL:0000837,1.01e-08,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!1.84e-14!29;UBERON:0002193!1.64e-12!48;UBERON:0005057!5.55e-12!51;UBERON:0000077!5.78e-12!97;UBERON:0002405!7.26e-12!70;UBERON:0004119!8.66e-12!130;UBERON:0000925!8.66e-12!130;UBERON:0006595!8.66e-12!130;UBERON:0003408!1.99e-11!24;UBERON:0001041!2.14e-11!92;UBERON:0001007!6.33e-11!128;UBERON:0001555!6.33e-11!128;UBERON:0007026!6.33e-11!128;UBERON:0006562!6.85e-11!24;UBERON:0001557!6.85e-11!24;UBERON:0001042!6.85e-11!24;UBERON:0008814!6.85e-11!24;UBERON:0009145!6.85e-11!24;UBERON:0002370!1.00e-10!23;UBERON:0000974!1.00e-10!23;UBERON:0004807!1.00e-10!23;UBERON:0005058!1.00e-10!23;UBERON:0003351!1.00e-10!23;UBERON:0009113!1.00e-10!23;UBERON:0003295!1.00e-10!23;UBERON:0009722!1.00e-10!23;UBERON:0005562!1.00e-10!23;UBERON:0007690!1.00e-10!23;UBERON:0002390!1.08e-10!45;UBERON:0003061!1.08e-10!45;UBERON:0004921!4.80e-10!126;UBERON:0004185!4.80e-10!126;UBERON:0003104!4.64e-09!131;UBERON:0009142!4.64e-09!131;UBERON:0001004!5.93e-09!42;UBERON:0000072!9.00e-09!27;UBERON:0000065!2.20e-08!41;UBERON:0000926!5.85e-08!193;UBERON:0004120!5.85e-08!193;UBERON:0006603!5.85e-08!193;UBERON:0007023!7.98e-08!51;UBERON:0002530!1.95e-07!65;UBERON:0003081!8.83e-07!88|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.41e-22,48;UBERON:0002405,2.41e-22,48;UBERON:0004177,1.49e-21,29;UBERON:0005057,1.49e-21,29;UBERON:0002390,4.08e-19,45;UBERON:0003061,4.08e-19,45;UBERON:0000077,1.25e-18,35;UBERON:0003408,5.19e-18,24;UBERON:0002370,8.05e-17,23;UBERON:0000974,8.05e-17,23;UBERON:0004807,8.05e-17,23;UBERON:0005058,8.05e-17,23;UBERON:0003351,8.05e-17,23;UBERON:0009113,8.05e-17,23;UBERON:0003295,8.05e-17,23;UBERON:0009722,8.05e-17,23;UBERON:0005562,8.05e-17,23;UBERON:0007690,8.05e-17,23;UBERON:0006562,6.79e-16,24;UBERON:0001557,6.79e-16,24;UBERON:0001042,6.79e-16,24;UBERON:0008814,6.79e-16,24;UBERON:0009145,6.79e-16,24;UBERON:0001004,7.57e-14,42;UBERON:0000072,1.55e-13,27;UBERON:0000065,6.94e-13,41;UBERON:0007811,3.73e-10,36;UBERON:0001041,6.86e-10,80;UBERON:0003081,4.79e-09,87;UBERON:0004119,3.81e-08,118;UBERON:0000925,3.81e-08,118;UBERON:0006595,3.81e-08,118;UBERON:0002530,5.17e-08,65;UBERON:0007023,6.92e-08,51;UBERON:0000153,1.16e-07,43;UBERON:0001007,1.16e-07,116;UBERON:0001555,1.16e-07,116;UBERON:0007026,1.16e-07,116;UBERON:0005911,4.03e-07,69|phase1_expression=0,0,0,0,0,0,0,31.6352142431862,7.180224829735,8.42632294759177,2.05461561870606,1.51567102091139,12.3264525550468,13.8998439846206,2.6648780945253,4.45445588257617,0,12.4607555316504,11.5176124228821,9.33657233955666,0.850432901510698,1.98581902401771,0.783599367416806,2.71987118748791,1.83527424853736,0,0,0,1.14014051673824,0.756090389279792,0.443461021310609,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0.485510353031154,0.125896817975577,0,0,0,0,0,0,0,0,8.72469551500229,18.1340535502836,51.7584450679395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302904773332736,0,0,0,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,1.7127581957859,37.2870552451927,4.30482203287992,0,0,0,0.301445281105245,0,0.251333182659351,0,2.60278842455841,3.5384422077995,0.161766849947409,0.441683036920787,0,0,0,0,2.81002760729451,0,0,0,0,0,0,0,0,0,0,0,0.497627882440372,0.505445516867349,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0.164167464079095,0.162137619091711,0,0,0.134206418760372,0.210289948564127,0,2.31293148088659,1.32225283331772,0,0,0.128867461322093,0,0.22237804384487,0,0,0.329397909448022,0.502670417600539,0,0.19496408711912,0,0.648414149624083,0.398282546508734,0.189667900953082,0,0,0,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0,0.123397163921801,0.592905254174298,0,0,0,0.202860121388503,0,0.25462585178142,0.287696137450811,0.162135226775035,1.09824565275233,1.43768206527355,2.23284568601102,0.936113019343682,0.252578877947112,0.538192240565737,0.964887042726734,12.5632169313291,0,0,0,0,0,0,0,0.315270288212382,1.99318220683897,0.637819074629948,2.29408640602033,2.24490476425664,1.3018415272336,0,0,2.45882136509518,3.31124095565679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,2.14461159864296,1.32745138339963,0,0,0,0,0.307435147943927,0.775284879504663,0.363533729477506,0.356497378384721,1.26414703174326,0,1.03135543248187,0,0.18006109403131,0,0,0,0,0,0,18.0697215209057,0.42366414172764,0,0.16488625294148,0,0,0.119372344003136,0,0,0,12.1318325366475,0.619160603889667,1.11116716421827,2.82552685507037,5.87785179200408,4.34678529092393,4.58941760983409,5.45810664062266,4.69879910935041,0.954670618015114,0,0,0.108005340821801,0,0.218362563746178,0,0.0826534557253359,0,0.129614973291793,4.34937519160848,0,0,0,0.194451188344048,0,0.168956125490778,0,0,0.104859344425711,0,0,8.84831137758899,0.810900861160657,1.02710957164827,2.20865399062252,2.32734704367726,1.78813219303138,2.04332264183947,1.03382669022204,1.81739609906666,1.752756553065,1.71404514732629,5.06780979846713,4.13710919053417,2.33753804363138,0.226730383615211,0,0,0,0.579568782096571,23.6479919068489,3.47988086107804,0,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0.290692833264657,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,1.12228454331548,0.118635018124174,0,0,0,0,0.249810577937946,0.233931608445408,0,0,0.220591419119515,0|short_description=p7@Shisa5}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:66940 | |||
|HGNC= | |||
|MCL_coexpression_id=122 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9QB08 | |||
|association_with_transcript=28bp_to_ENSMUST00000124432_5end | |||
|cluster_id=chr9:108955396..108955417,+ | |||
|description=CAGE_peak_7_at_Shisa5_5end | |||
|id=chr9:108955396..108955417,+ | |||
|ontology_enrichment_celltype=CL:0000838!4.52e-10!12;CL:0000084!2.84e-09!11;CL:0000827!2.84e-09!11;CL:0000542!6.65e-09!13;CL:0000051!6.65e-09!13;CL:0000791!1.87e-08!9;CL:0000789!1.87e-08!9;CL:0002420!1.87e-08!9;CL:0002419!1.87e-08!9;CL:0000790!1.87e-08!9;CL:0000624!1.52e-07!8;CL:0002031!3.65e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,5.00e-14,12;CL:0000791,2.41e-13,9;CL:0000789,2.41e-13,9;CL:0002420,2.41e-13,9;CL:0002419,2.41e-13,9;CL:0000790,2.41e-13,9;CL:0000542,1.03e-12,13;CL:0000051,1.03e-12,13;CL:0000084,1.10e-12,11;CL:0000827,1.10e-12,11;CL:0002031,1.87e-12,25;CL:0000624,8.62e-12,8;CL:0000738,5.11e-09,17;CL:0002087,5.11e-09,17;CL:0000893,8.69e-09,6;CL:0002489,8.69e-09,6;CL:0000898,8.69e-09,6;CL:0000809,8.69e-09,6;CL:0000810,8.69e-09,6;CL:0000895,8.69e-09,6;CL:0000808,8.69e-09,6;CL:0000894,8.69e-09,6;CL:0000806,8.69e-09,6;CL:0000807,8.69e-09,6;CL:0000805,8.69e-09,6;CL:0002425,8.69e-09,6;CL:0002436,8.69e-09,6;CL:0002427,8.69e-09,6;CL:0002428,8.69e-09,6;CL:0002429,8.69e-09,6;CL:0002433,8.69e-09,6;CL:0002431,8.69e-09,6;CL:0002432,8.69e-09,6;CL:0000988,1.01e-08,32;CL:0002032,1.01e-08,32;CL:0000037,1.01e-08,32;CL:0000837,1.01e-08,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.84e-14!29;UBERON:0002193!1.64e-12!48;UBERON:0005057!5.55e-12!51;UBERON:0000077!5.78e-12!97;UBERON:0002405!7.26e-12!70;UBERON:0004119!8.66e-12!130;UBERON:0000925!8.66e-12!130;UBERON:0006595!8.66e-12!130;UBERON:0003408!1.99e-11!24;UBERON:0001041!2.14e-11!92;UBERON:0001007!6.33e-11!128;UBERON:0001555!6.33e-11!128;UBERON:0007026!6.33e-11!128;UBERON:0006562!6.85e-11!24;UBERON:0001557!6.85e-11!24;UBERON:0001042!6.85e-11!24;UBERON:0008814!6.85e-11!24;UBERON:0009145!6.85e-11!24;UBERON:0002370!1.00e-10!23;UBERON:0000974!1.00e-10!23;UBERON:0004807!1.00e-10!23;UBERON:0005058!1.00e-10!23;UBERON:0003351!1.00e-10!23;UBERON:0009113!1.00e-10!23;UBERON:0003295!1.00e-10!23;UBERON:0009722!1.00e-10!23;UBERON:0005562!1.00e-10!23;UBERON:0007690!1.00e-10!23;UBERON:0002390!1.08e-10!45;UBERON:0003061!1.08e-10!45;UBERON:0004921!4.80e-10!126;UBERON:0004185!4.80e-10!126;UBERON:0003104!4.64e-09!131;UBERON:0009142!4.64e-09!131;UBERON:0001004!5.93e-09!42;UBERON:0000072!9.00e-09!27;UBERON:0000065!2.20e-08!41;UBERON:0000926!5.85e-08!193;UBERON:0004120!5.85e-08!193;UBERON:0006603!5.85e-08!193;UBERON:0007023!7.98e-08!51;UBERON:0002530!1.95e-07!65;UBERON:0003081!8.83e-07!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.41e-22,48;UBERON:0002405,2.41e-22,48;UBERON:0004177,1.49e-21,29;UBERON:0005057,1.49e-21,29;UBERON:0002390,4.08e-19,45;UBERON:0003061,4.08e-19,45;UBERON:0000077,1.25e-18,35;UBERON:0003408,5.19e-18,24;UBERON:0002370,8.05e-17,23;UBERON:0000974,8.05e-17,23;UBERON:0004807,8.05e-17,23;UBERON:0005058,8.05e-17,23;UBERON:0003351,8.05e-17,23;UBERON:0009113,8.05e-17,23;UBERON:0003295,8.05e-17,23;UBERON:0009722,8.05e-17,23;UBERON:0005562,8.05e-17,23;UBERON:0007690,8.05e-17,23;UBERON:0006562,6.79e-16,24;UBERON:0001557,6.79e-16,24;UBERON:0001042,6.79e-16,24;UBERON:0008814,6.79e-16,24;UBERON:0009145,6.79e-16,24;UBERON:0001004,7.57e-14,42;UBERON:0000072,1.55e-13,27;UBERON:0000065,6.94e-13,41;UBERON:0007811,3.73e-10,36;UBERON:0001041,6.86e-10,80;UBERON:0003081,4.79e-09,87;UBERON:0004119,3.81e-08,118;UBERON:0000925,3.81e-08,118;UBERON:0006595,3.81e-08,118;UBERON:0002530,5.17e-08,65;UBERON:0007023,6.92e-08,51;UBERON:0000153,1.16e-07,43;UBERON:0001007,1.16e-07,116;UBERON:0001555,1.16e-07,116;UBERON:0007026,1.16e-07,116;UBERON:0005911,4.03e-07,69 | |||
|phase1_expression=0,0,0,0,0,0,0,31.6352142431862,7.180224829735,8.42632294759177,2.05461561870606,1.51567102091139,12.3264525550468,13.8998439846206,2.6648780945253,4.45445588257617,0,12.4607555316504,11.5176124228821,9.33657233955666,0.850432901510698,1.98581902401771,0.783599367416806,2.71987118748791,1.83527424853736,0,0,0,1.14014051673824,0.756090389279792,0.443461021310609,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0.485510353031154,0.125896817975577,0,0,0,0,0,0,0,0,8.72469551500229,18.1340535502836,51.7584450679395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302904773332736,0,0,0,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,1.7127581957859,37.2870552451927,4.30482203287992,0,0,0,0.301445281105245,0,0.251333182659351,0,2.60278842455841,3.5384422077995,0.161766849947409,0.441683036920787,0,0,0,0,2.81002760729451,0,0,0,0,0,0,0,0,0,0,0,0.497627882440372,0.505445516867349,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0.164167464079095,0.162137619091711,0,0,0.134206418760372,0.210289948564127,0,2.31293148088659,1.32225283331772,0,0,0.128867461322093,0,0.22237804384487,0,0,0.329397909448022,0.502670417600539,0,0.19496408711912,0,0.648414149624083,0.398282546508734,0.189667900953082,0,0,0,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0,0.123397163921801,0.592905254174298,0,0,0,0.202860121388503,0,0.25462585178142,0.287696137450811,0.162135226775035,1.09824565275233,1.43768206527355,2.23284568601102,0.936113019343682,0.252578877947112,0.538192240565737,0.964887042726734,12.5632169313291,0,0,0,0,0,0,0,0.315270288212382,1.99318220683897,0.637819074629948,2.29408640602033,2.24490476425664,1.3018415272336,0,0,2.45882136509518,3.31124095565679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,2.14461159864296,1.32745138339963,0,0,0,0,0.307435147943927,0.775284879504663,0.363533729477506,0.356497378384721,1.26414703174326,0,1.03135543248187,0,0.18006109403131,0,0,0,0,0,0,18.0697215209057,0.42366414172764,0,0.16488625294148,0,0,0.119372344003136,0,0,0,12.1318325366475,0.619160603889667,1.11116716421827,2.82552685507037,5.87785179200408,4.34678529092393,4.58941760983409,5.45810664062266,4.69879910935041,0.954670618015114,0,0,0.108005340821801,0,0.218362563746178,0,0.0826534557253359,0,0.129614973291793,4.34937519160848,0,0,0,0.194451188344048,0,0.168956125490778,0,0,0.104859344425711,0,0,8.84831137758899,0.810900861160657,1.02710957164827,2.20865399062252,2.32734704367726,1.78813219303138,2.04332264183947,1.03382669022204,1.81739609906666,1.752756553065,1.71404514732629,5.06780979846713,4.13710919053417,2.33753804363138,0.226730383615211,0,0,0,0.579568782096571,23.6479919068489,3.47988086107804,0,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0.290692833264657,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,1.12228454331548,0.118635018124174,0,0,0,0,0.249810577937946,0.233931608445408,0,0,0.220591419119515,0 | |||
|short_description=p7@Shisa5 | |||
}} |
Revision as of 14:16, 4 August 2015
Short description: | p7@Shisa5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Shisa5_5end |
Coexpression cluster: | MCL_coexpression_mm9:122 |
Association with transcript: | 28bp_to_ENSMUST00000124432_5end |
EntrezGene: | 66940 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data