FFCP PHASE1:Mm9::chr1:107560446..107560497,+: Difference between revisions
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{{FFCP|EntrezGene=227446|HGNC=|MCL_coexpression_id=3219|UniProt=E9QM90,G3X9J4,Q148V7,Q9D743|association_with_transcript=8bp_to_ENSMUST00000039173,ENSMUST00000086721,NM_029349,NM_173187,uc007cgi.2,uc007cgj.2,uc007cgk.2,uc007cgl.2,uc007cgm.2_5end|description=CAGE_peak_1_at_2310035C23Rik_5end|id=chr1:107560446..107560497,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000064!1.71e-11!99;UBERON:0002020!1.80e-10!34;UBERON:0001049!1.56e-09!52;UBERON:0005068!1.56e-09!52;UBERON:0006241!1.56e-09!52;UBERON:0007135!1.56e-09!52;UBERON:0000955!3.54e-09!50;UBERON:0006238!3.54e-09!50;UBERON:0007811!6.18e-09!86;UBERON:0002616!1.00e-08!49;UBERON:0002791!1.58e-08!29;UBERON:0003528!1.58e-08!29;UBERON:0001893!1.58e-08!29;UBERON:0001017!2.73e-08!73;UBERON:0005743!2.73e-08!73;UBERON:0002021!6.52e-08!10;UBERON:0000411!6.52e-08!10;UBERON:0001950!6.52e-08!10;UBERON:0000033!6.56e-08!63;UBERON:0000073!1.80e-07!75;UBERON:0001016!1.80e-07!75;UBERON:0003080!5.05e-07!40;UBERON:0000153!6.10e-07!94;UBERON:0002780!9.89e-07!39;UBERON:0001890!9.89e-07!39;UBERON:0006240!9.89e-07!39|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.44e-10,54;UBERON:0002020,1.80e-10,34;UBERON:0001049,1.56e-09,52;UBERON:0005068,1.56e-09,52;UBERON:0006241,1.56e-09,52;UBERON:0007135,1.56e-09,52;UBERON:0010371,3.66e-09,73;UBERON:0011216,6.08e-09,194;UBERON:0003528,1.58e-08,29;UBERON:0002791,1.58e-08,29;UBERON:0001893,1.58e-08,29;UBERON:0001017,2.73e-08,73;UBERON:0002021,6.52e-08,10;UBERON:0000411,6.52e-08,10;UBERON:0001950,6.52e-08,10;UBERON:0000955,7.11e-08,47;UBERON:0006238,7.11e-08,47;UBERON:0004121,8.74e-08,95;UBERON:0000924,8.74e-08,95;UBERON:0006601,8.74e-08,95;UBERON:0002346,1.26e-07,64;UBERON:0003075,1.26e-07,64;UBERON:0007284,1.26e-07,64;UBERON:0001016,1.80e-07,75;UBERON:0002616,1.90e-07,46;UBERON:0003080,5.05e-07,40;UBERON:0002780,9.89e-07,39;UBERON:0001890,9.89e-07,39;UBERON:0006240,9.89e-07,39|phase1_expression=47.5642075901238,80.6133191646924,79.6248668931688,110.7019013383,113.202434967874,57.0789524500425,56.5342590241172,64.0451684270218,37.8721662587984,43.0678728432468,34.243593645101,30.3931925772232,63.8578722643397,65.3904610094101,44.6367080832988,45.9618856974905,48.2697695908421,68.1398277173793,73.6304508462817,68.3267339394829,34.8677489619386,27.8014663362479,35.5231713228952,34.5583633233758,36.0172571275457,58.5716603397321,53.4144875237253,52.5749807753569,53.0165340283283,46.8776041353471,43.2374495777844,28.5763803056834,27.0628506537211,31.6963362030877,44.7720010614476,29.5897668738116,40.0171938274243,69.4762507023267,53.1308034276184,49.7347556775108,61.7643062432565,60.1080026763432,62.6308355410188,32.6072758556745,35.4819259268301,36.892897184498,30.5132624295735,13.7355848519681,14.2796018777407,19.8318497055769,18.6181940761732,11.5002051491977,54.8649121808798,63.8318684969983,62.5134466404983,27.2695002198104,30.3725446335082,33.5186859980338,46.5327859977075,61.3629535955558,46.2696924559511,18.9752937958714,12.450127145556,26.996991518442,32.6325899647102,24.8668040231135,19.7736072942147,20.7477884873639,42.9274994957098,38.7467043011952,39.7514176954112,54.8449890055303,55.438003778855,44.4641601150283,38.7215702913675,41.3648453974509,77.0811166995721,64.7374804091902,66.2044158334409,57.2386488749041,56.1734131718795,59.9050376140274,56.394965798279,63.0294123235482,56.5353516774197,69.5323461717856,64.7791147635918,60.3934204473974,24.4595604466185,28.9439075208989,60.291813649949,47.3233132339763,29.2387673494333,41.5571457561119,42.2354671340985,25.5375325645481,26.9653286652964,23.8602451609281,20.5230943636266,22.9670723431721,41.2671219945674,70.5795625778748,109.566253073858,213.320010945999,31.6076919876373,36.9905403593644,26.7927955857835,35.3970027129086,40.1353719653116,38.14962973966,21.3386951922347,21.3125834818499,23.9840117146301,27.2807979400247,38.0987411119684,23.625319169979,35.3488803860155,23.2804964641058,36.2690326299448,27.1768307911647,31.3594956213759,31.0320162006542,61.5092812019803,76.7085688170254,80.0086420027398,42.9167852750434,36.9030583478234,43.1929966315254,40.2812619821615,56.4710710556182,57.1875753523283,65.5915718029152,65.5317687124882,79.0160763150721,60.8818970559511,66.3566765947129,33.4033113429037,45.0353233608537,54.5881158216737,43.5614641685001,24.592763719951,23.2201125477808,26.4691330813863,32.8536502881859,49.4625348830154,49.1956685893823,47.1319674535436,58.2082584162785,15.9520314770303,28.5550181053407,28.6800332387237,23.6731391021781,36.1461423993277,33.7804601526502,37.6581309626537,24.6802490854932,37.9195121149147,33.9699237391424,40.3512169141742,22.7838349789052,27.9086011377504,22.3276956211658,26.0419209143731,27.5469924446365,25.7626078521922,20.6955210827863,24.9494263301646,30.0086929883626,25.6713365865029,26.5951291808134,33.5624871519843,34.3569970449531,29.8588156795829,31.9411276649685,72.760322203188,61.6398628151914,78.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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:227446 | |||
|HGNC= | |||
|MCL_coexpression_id=3219 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9QM90,uniprot:G3X9J4,uniprot:Q148V7,uniprot:Q9D743 | |||
|association_with_transcript=8bp_to_ENSMUST00000039173,ENSMUST00000086721,NM_029349,NM_173187,uc007cgi.2,uc007cgj.2,uc007cgk.2,uc007cgl.2,uc007cgm.2_5end | |||
|cluster_id=chr1:107560446..107560497,+ | |||
|description=CAGE_peak_1_at_2310035C23Rik_5end | |||
|id=chr1:107560446..107560497,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000064!1.71e-11!99;UBERON:0002020!1.80e-10!34;UBERON:0001049!1.56e-09!52;UBERON:0005068!1.56e-09!52;UBERON:0006241!1.56e-09!52;UBERON:0007135!1.56e-09!52;UBERON:0000955!3.54e-09!50;UBERON:0006238!3.54e-09!50;UBERON:0007811!6.18e-09!86;UBERON:0002616!1.00e-08!49;UBERON:0002791!1.58e-08!29;UBERON:0003528!1.58e-08!29;UBERON:0001893!1.58e-08!29;UBERON:0001017!2.73e-08!73;UBERON:0005743!2.73e-08!73;UBERON:0002021!6.52e-08!10;UBERON:0000411!6.52e-08!10;UBERON:0001950!6.52e-08!10;UBERON:0000033!6.56e-08!63;UBERON:0000073!1.80e-07!75;UBERON:0001016!1.80e-07!75;UBERON:0003080!5.05e-07!40;UBERON:0000153!6.10e-07!94;UBERON:0002780!9.89e-07!39;UBERON:0001890!9.89e-07!39;UBERON:0006240!9.89e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.44e-10,54;UBERON:0002020,1.80e-10,34;UBERON:0001049,1.56e-09,52;UBERON:0005068,1.56e-09,52;UBERON:0006241,1.56e-09,52;UBERON:0007135,1.56e-09,52;UBERON:0010371,3.66e-09,73;UBERON:0011216,6.08e-09,194;UBERON:0003528,1.58e-08,29;UBERON:0002791,1.58e-08,29;UBERON:0001893,1.58e-08,29;UBERON:0001017,2.73e-08,73;UBERON:0002021,6.52e-08,10;UBERON:0000411,6.52e-08,10;UBERON:0001950,6.52e-08,10;UBERON:0000955,7.11e-08,47;UBERON:0006238,7.11e-08,47;UBERON:0004121,8.74e-08,95;UBERON:0000924,8.74e-08,95;UBERON:0006601,8.74e-08,95;UBERON:0002346,1.26e-07,64;UBERON:0003075,1.26e-07,64;UBERON:0007284,1.26e-07,64;UBERON:0001016,1.80e-07,75;UBERON:0002616,1.90e-07,46;UBERON:0003080,5.05e-07,40;UBERON:0002780,9.89e-07,39;UBERON:0001890,9.89e-07,39;UBERON:0006240,9.89e-07,39 | |||
|phase1_expression=47.5642075901238,80.6133191646924,79.6248668931688,110.7019013383,113.202434967874,57.0789524500425,56.5342590241172,64.0451684270218,37.8721662587984,43.0678728432468,34.243593645101,30.3931925772232,63.8578722643397,65.3904610094101,44.6367080832988,45.9618856974905,48.2697695908421,68.1398277173793,73.6304508462817,68.3267339394829,34.8677489619386,27.8014663362479,35.5231713228952,34.5583633233758,36.0172571275457,58.5716603397321,53.4144875237253,52.5749807753569,53.0165340283283,46.8776041353471,43.2374495777844,28.5763803056834,27.0628506537211,31.6963362030877,44.7720010614476,29.5897668738116,40.0171938274243,69.4762507023267,53.1308034276184,49.7347556775108,61.7643062432565,60.1080026763432,62.6308355410188,32.6072758556745,35.4819259268301,36.892897184498,30.5132624295735,13.7355848519681,14.2796018777407,19.8318497055769,18.6181940761732,11.5002051491977,54.8649121808798,63.8318684969983,62.5134466404983,27.2695002198104,30.3725446335082,33.5186859980338,46.5327859977075,61.3629535955558,46.2696924559511,18.9752937958714,12.450127145556,26.996991518442,32.6325899647102,24.8668040231135,19.7736072942147,20.7477884873639,42.9274994957098,38.7467043011952,39.7514176954112,54.8449890055303,55.438003778855,44.4641601150283,38.7215702913675,41.3648453974509,77.0811166995721,64.7374804091902,66.2044158334409,57.2386488749041,56.1734131718795,59.9050376140274,56.394965798279,63.0294123235482,56.5353516774197,69.5323461717856,64.7791147635918,60.3934204473974,24.4595604466185,28.9439075208989,60.291813649949,47.3233132339763,29.2387673494333,41.5571457561119,42.2354671340985,25.5375325645481,26.9653286652964,23.8602451609281,20.5230943636266,22.9670723431721,41.2671219945674,70.5795625778748,109.566253073858,213.320010945999,31.6076919876373,36.9905403593644,26.7927955857835,35.3970027129086,40.1353719653116,38.14962973966,21.3386951922347,21.3125834818499,23.9840117146301,27.2807979400247,38.0987411119684,23.625319169979,35.3488803860155,23.2804964641058,36.2690326299448,27.1768307911647,31.3594956213759,31.0320162006542,61.5092812019803,76.7085688170254,80.0086420027398,42.9167852750434,36.9030583478234,43.1929966315254,40.2812619821615,56.4710710556182,57.1875753523283,65.5915718029152,65.5317687124882,79.0160763150721,60.8818970559511,66.3566765947129,33.4033113429037,45.0353233608537,54.5881158216737,43.5614641685001,24.592763719951,23.2201125477808,26.4691330813863,32.8536502881859,49.4625348830154,49.1956685893823,47.1319674535436,58.2082584162785,15.9520314770303,28.5550181053407,28.6800332387237,23.6731391021781,36.1461423993277,33.7804601526502,37.6581309626537,24.6802490854932,37.9195121149147,33.9699237391424,40.3512169141742,22.7838349789052,27.9086011377504,22.3276956211658,26.0419209143731,27.5469924446365,25.7626078521922,20.6955210827863,24.9494263301646,30.0086929883626,25.6713365865029,26.5951291808134,33.5624871519843,34.3569970449531,29.8588156795829,31.9411276649685,72.760322203188,61.6398628151914,78.3092515671601,38.874233299541,22.82184280727,31.1197140292988,31.1859256399466,39.1266037769284,41.5846941989907,40.8985096142002,47.4529061544512,31.6221993070101,52.7803938480566,53.9172039231519,55.174836654711,47.6374286586737,51.2247178203025,66.1149027204499,11.7594098590911,27.7623885641641,23.6686244913469,29.3257912097252,28.8989205879762,39.9072815175913,42.8743721702464,37.1977572908597,38.6216870489782,39.7338867828198,24.0126627940591,27.3625973374394,27.3217003207352,28.1077640481067,31.6461789366065,27.0118418922707,32.3374831762403,33.0850558068432,39.7231305598837,29.1035097979366,50.3188722845741,40.9355042435354,29.9556166189978,37.6342528141196,30.676957712247,44.3848039654298,40.645701836653,23.4969350595401,26.5632911600502,26.140743209379,29.8056615326398,37.5214016669667,42.6098117185965,50.5396147951699,48.0787189523883,46.286120136594,51.0255259703959,44.2430949732493,45.7615201944623,46.8662949804097,63.3323392544944,62.0052479553329,59.5034770353034,52.1520450515944,58.4404147555563,58.3714199229172,19.180388609071,23.2273253028023,29.0267561862956,27.3307121007647,40.715022171499,31.0659437338318,42.1089494015725,39.3476377796477,43.3147450792137,39.7467966759384,44.6675189079572,69.4054043471103,37.7560626653995,22.7923972694087,39.7444180822726,43.5521124647494,38.4960901185892,21.1219153454834,20.8603254305678,32.2514686382586,17.7181135728464,25.8245524272899,44.449666424934,39.6251765130481,36.3627325952416,38.5564844681696,27.4088382294997,37.1287955693473,54.1298973148523,28.9898361390409,19.4038025674132,30.0071849044229,39.9015525695116,31.9280183507706,38.9981178827027,34.1000743008351,27.6912615515178,25.4198485036584,45.4288499993222,40.891790729487,49.7310434223389,45.1140678462606,42.3771821211134,61.716978304143,49.2602613904448,57.110993019237,36.9081102523362,24.147263551697,28.5199572149356,45.2084296811258,44.9724009202173,40.722514830761,46.7440682483102,40.3060182692135,39.1105925866519,27.6854479224383,17.3984796469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| |||
|short_description=p1@2310035C23Rik | |||
}} |
Revision as of 14:56, 4 August 2015
Short description: | p1@2310035C23Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_2310035C23Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:3219 |
Association with transcript: | 8bp_to_ENSMUST00000039173, ENSMUST00000086721, NM_029349, NM_173187, uc007cgi.2, uc007cgj.2, uc007cgk.2, uc007cgl.2, uc007cgm.2_5end |
EntrezGene: | 227446 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 1.44e-10 | 54 |
gray matter | 1.80e-10 | 34 |
neural tube | 1.56e-09 | 52 |
neural rod | 1.56e-09 | 52 |
future spinal cord | 1.56e-09 | 52 |
neural keel | 1.56e-09 | 52 |
ecto-epithelium | 3.66e-09 | 73 |
organ system subdivision | 6.08e-09 | 194 |
brain grey matter | 1.58e-08 | 29 |
regional part of telencephalon | 1.58e-08 | 29 |
telencephalon | 1.58e-08 | 29 |
central nervous system | 2.73e-08 | 73 |
occipital lobe | 6.52e-08 | 10 |
visual cortex | 6.52e-08 | 10 |
neocortex | 6.52e-08 | 10 |
brain | 7.11e-08 | 47 |
future brain | 7.11e-08 | 47 |
ectoderm-derived structure | 8.74e-08 | 95 |
ectoderm | 8.74e-08 | 95 |
presumptive ectoderm | 8.74e-08 | 95 |
neurectoderm | 1.26e-07 | 64 |
neural plate | 1.26e-07 | 64 |
presumptive neural plate | 1.26e-07 | 64 |
nervous system | 1.80e-07 | 75 |
regional part of brain | 1.90e-07 | 46 |
anterior neural tube | 5.05e-07 | 40 |
regional part of forebrain | 9.89e-07 | 39 |
forebrain | 9.89e-07 | 39 |
future forebrain | 9.89e-07 | 39 |