FFCP PHASE1:Mm9::chr2:168567476..168567493,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=11981|HGNC=|MCL_coexpression_id=13|UniProt=A2AQC3|association_with_transcript=-14bp_to_ENSMUST00000109176_5end|description=CAGE_peak_5_at_Atp9a_5end|id=chr2:168567476..168567493,-|ontology_enrichment_celltype=CL:0000117!2.29e-14!23;CL:0000337!2.29e-14!23;CL:0000540!1.16e-11!33;CL:0000047!1.16e-11!33;CL:0000031!1.16e-11!33;CL:0000404!1.16e-11!33;CL:0000221!6.78e-09!44;CL:0000133!6.78e-09!44;CL:0002319!1.46e-08!43;CL:0000393!8.10e-08!39;CL:0000211!8.10e-08!39|ontology_enrichment_celltype_v019_2=CL:0000117,9.13e-17,23;CL:0000337,9.13e-17,23;CL:0000540,9.55e-13,33;CL:0000047,9.55e-13,33;CL:0000031,9.55e-13,33;CL:0000404,9.55e-13,33;CL:0000221,3.86e-10,44;CL:0000133,3.86e-10,44;CL:0002319,9.59e-10,43;CL:0000393,7.20e-09,39;CL:0000211,7.20e-09,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.27e-24!73;UBERON:0005743!1.27e-24!73;UBERON:0002346!2.68e-23!71;UBERON:0003075!2.68e-23!71;UBERON:0007284!2.68e-23!71;UBERON:0000073!3.31e-23!75;UBERON:0001016!3.31e-23!75;UBERON:0001049!3.40e-23!52;UBERON:0005068!3.40e-23!52;UBERON:0006241!3.40e-23!52;UBERON:0007135!3.40e-23!52;UBERON:0004121!6.91e-23!102;UBERON:0000924!6.91e-23!102;UBERON:0006601!6.91e-23!102;UBERON:0000033!1.08e-21!63;UBERON:0000955!2.67e-21!50;UBERON:0006238!2.67e-21!50;UBERON:0002616!8.31e-21!49;UBERON:0003056!3.31e-19!49;UBERON:0003080!1.19e-18!40;UBERON:0002020!4.43e-18!34;UBERON:0002780!5.05e-18!39;UBERON:0001890!5.05e-18!39;UBERON:0006240!5.05e-18!39;UBERON:0002791!1.19e-14!29;UBERON:0003528!1.19e-14!29;UBERON:0001893!1.19e-14!29;UBERON:0000468!3.51e-10!333;UBERON:0000956!5.91e-10!21;UBERON:0001869!5.91e-10!21;UBERON:0000203!5.91e-10!21;UBERON:0007811!2.11e-09!86;UBERON:0000153!4.71e-09!94;UBERON:0004111!2.57e-08!122;UBERON:0000025!5.25e-08!114;UBERON:0002619!5.43e-08!17;UBERON:0000922!1.79e-07!328|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.06e-29,54;UBERON:0001017,1.11e-28,73;UBERON:0001049,1.13e-27,52;UBERON:0005068,1.13e-27,52;UBERON:0006241,1.13e-27,52;UBERON:0007135,1.13e-27,52;UBERON:0001016,4.28e-27,75;UBERON:0002346,1.24e-26,64;UBERON:0003075,1.24e-26,64;UBERON:0007284,1.24e-26,64;UBERON:0004121,5.09e-24,95;UBERON:0000924,5.09e-24,95;UBERON:0006601,5.09e-24,95;UBERON:0000955,2.43e-23,47;UBERON:0006238,2.43e-23,47;UBERON:0010371,4.93e-23,73;UBERON:0002616,9.19e-23,46;UBERON:0003056,4.04e-22,49;UBERON:0003080,7.38e-22,40;UBERON:0002020,3.53e-21,34;UBERON:0002780,4.12e-21,39;UBERON:0001890,4.12e-21,39;UBERON:0006240,4.12e-21,39;UBERON:0010314,8.72e-19,92;UBERON:0003528,4.20e-17,29;UBERON:0002791,4.20e-17,29;UBERON:0001893,4.20e-17,29;UBERON:0000956,1.58e-11,21;UBERON:0001869,1.58e-11,21;UBERON:0000203,1.58e-11,21;UBERON:0002619,3.37e-09,17;UBERON:0004111,1.02e-07,122;UBERON:0000025,1.15e-07,114;UBERON:0002420,6.64e-07,8;UBERON:0007245,6.64e-07,8;UBERON:0010009,6.64e-07,8;UBERON:0010011,6.64e-07,8;UBERON:0000454,6.64e-07,8|phase1_expression=3.36312578920067,0,0.909998478779072,0,0,0.671517087647559,0.233612640595526,0.516493293766305,0.140788722151667,0,0.171217968225505,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0,0.22940928106717,0.57423196411502,0.430761996159075,0,0.190023419456374,0.504060259519861,0.665191531965914,0,0,0,2.3108129580102,0.997407872150954,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0.436050312760893,1.5378032791413,1.36100929351998,0.55994568650145,0,0,0,0,0.771778308107841,0.85960031981627,0,11.3297218081375,3.70293685490423,8.23980824558033,1.0165335962074,0.889294796111139,0,0.988866362566974,0.7104801149461,1.79760066311043,2.30530983192933,5.91030790158323,3.24014251996058,3.57552434297349,16.2821061110168,6.84692476950002,5.26710436624302,3.1629005436018,4.5960939330501,4.40463523997555,6.12899222808901,5.06901559745603,6.85808696197008,3.65950574409639,13.5437476344758,6.70039197603314,3.93933827022176,8.86229837105499,8.83885756421003,9.96601765593721,7.26957838718672,0.302904773332736,0.302286240427142,2.02905142091174,0,0,0,0.649776417447669,0.448026887097336,0.421333260395256,0,0,0,2.53518155598025,0,0,0,0.432982082022428,0.760079596425296,1.01104889002957,0.34255163915718,0.258937883647172,1.7813056687779,2.08182392119363,1.21786191324856,0.691846491768175,0.753613202763113,1.64624189989987,1.75933227861546,2.22475470960936,0.289198713839823,0,1.61766849947409,0.441683036920787,0,1.86391761218122,5.27005434620785,8.16842156572475,1.02182822083437,0,0,0,6.5907881338122,3.66000482254901,14.3245961408665,5.9100268865374,5.37002460393694,5.194701113989,6.81413304884582,2.24046600470696,0.622034853050465,0.505445516867349,1.26265113531884,0.780722657776222,2.5289231487682,2.16074555766419,1.20563854268572,3.6739709541717,1.7935920839879,3.84177070694888,0.258703370739016,0.646703978798527,1.13463648100692,1.58356011747554,0.657587197282725,1.39023624612799,1.0447564995665,0.823128545631774,1.19420560091096,0,0,0,0.414251545071004,0.469052119962192,0.180062061461015,1.18372367792605,0.590292695242212,0.771335564436891,1.16266972375204,0.804820204198858,0.817357396570186,0.822799249567402,1.14917224855367,1.54030738137126,1.31579988682799,0.439100230582101,0.939444931322602,6.9395683026162,8.84979666461846,0.991256348951394,0.793351699990633,0.639864751605702,0.928946687441754,0.902072229254653,1.00841762311671,0.889512175379481,1.71203063501303,0.949058123089023,1.31759163779209,1.25667604400135,1.39269530428806,1.75467678407208,0,0.648414149624083,1.39398891278057,0.379335801906163,0.685491075658373,0,0,0.775809948670503,1.05203729835478,1.20149420536089,0.147610147979602,0.784993639206874,0.740382983530803,0.592905254174298,0.500535317148282,0,0,0.405720242777006,0.482354319504834,0,0.575392274901621,0.162135226775035,1.09824565275233,0,1.11642284300551,0.624075346229121,0.757736633841335,0.538192240565737,2.8946611281802,1.84753190166605,0.757965647081939,0.651859905768103,1.01847051465113,0.234690248288502,0.670025029767263,1.6663054862021,2.92700471786698,0.630540576424764,1.32878813789265,1.2756381492599,0.81931657357869,0.518054945597687,0.723245292907558,0,0,0.491764273019036,0.551873492609465,5.29816946959713,5.62616095642575,0,0.504941854408746,0.631016438832513,0.390438744296638,1.72338718186239,0,1.55959071857676,1.69845918473299,0.809621403349789,1.46127928955656,0.790575555893047,3.53453448063988,0.567760340833074,1.95872164033981,1.46598263418218,1.48473110675282,0,0.242780636154981,0.604647113929502,0.565815239267694,0.295301892880773,1.84461088766356,3.10113951801865,2.90826983582004,1.42598951353889,1.26414703174326,1.05418608574999,1.03135543248187,1.70219802876894,2.16073312837572,1.16422815404479,1.92903331528433,1.77340233642274,3.21063871683727,3.1264313914403,6.69822888052118,0.469343416127421,1.0591603543191,0.882113592219848,0.98931751764888,0.645857706783622,1.08563264870681,0.716234064018819,0.164140899745061,0.582961673259701,5.19190845629427,0,1.44470807574256,0.555583582109135,0,0,0.457556346413045,0,0,0,0,0.158167996790568,1.01659733563424,0.432021363287205,0.209088296014469,1.52853794622324,0.809186078308924,1.81837602595739,1.04702376793612,0.90730481304255,0.621339313086926,0.56369293868419,2.0932316446157,0.827292452285488,0.583353565032143,1.54991788173277,1.01373675294467,1.5256441023948,1.43224823328345,1.25831213310853,0.724752362478018,1.15212002503146,0.316011120628178,1.82452693761148,0.205421914329655,0.25984164595559,0.358053391334963,0,0.480781798079875,0.590758108698309,1.00966449948148,0.381034033274999,0.302478555410522,0.38983152295901,0.0962118416403295,0.350630706544707,0.226730383615211,0,0.448569283047378,0.167884616364078,1.9318959403219,0.563047426353546,0.915758121336325,0.428736758158132,1.50471631210609,5.64751842617067,5.52390283808612,1.14579102687879,7.73339320546594,4.7955776383945,7.55393897389701,6.07520250208625,2.2516060161211,3.62513927187364,1.55328093525546,0.103787347584177,1.19707462020309,2.21953687480374,0.486213434136588,0.628839487883947,2.02227859295016,2.22246727801615,0.824140228955577,2.24643446714271,1.76888048234658,0.50695859978048,2.07488975524684,1.77918864192777,1.85672941974121,3.15895079255873,1.42888107384922,2.20180219295225,2.70072908649187,2.88460130562315,2.06078488188156,0.685738504770831,1.77475806159337,0.953744759789284,1.45346416632329,1.69396884747595,1.69229215783353,2.37806364734604,1.57841826862706,1.7654534799962,0,3.08451047122853,2.85662998889134,1.63692417267876,1.70430525304563,1.35034627686799,5.24602213669686,1.40358965067245,2.57845264857958,0.956441660344217,1.54413993383661,0.927471342481686|short_description=p5@Atp9a}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:11981 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:A2AQC3 | |||
|association_with_transcript=-14bp_to_ENSMUST00000109176_5end | |||
|cluster_id=chr2:168567476..168567493,- | |||
|description=CAGE_peak_5_at_Atp9a_5end | |||
|id=chr2:168567476..168567493,- | |||
|ontology_enrichment_celltype=CL:0000117!2.29e-14!23;CL:0000337!2.29e-14!23;CL:0000540!1.16e-11!33;CL:0000047!1.16e-11!33;CL:0000031!1.16e-11!33;CL:0000404!1.16e-11!33;CL:0000221!6.78e-09!44;CL:0000133!6.78e-09!44;CL:0002319!1.46e-08!43;CL:0000393!8.10e-08!39;CL:0000211!8.10e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.13e-17,23;CL:0000337,9.13e-17,23;CL:0000540,9.55e-13,33;CL:0000047,9.55e-13,33;CL:0000031,9.55e-13,33;CL:0000404,9.55e-13,33;CL:0000221,3.86e-10,44;CL:0000133,3.86e-10,44;CL:0002319,9.59e-10,43;CL:0000393,7.20e-09,39;CL:0000211,7.20e-09,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.27e-24!73;UBERON:0005743!1.27e-24!73;UBERON:0002346!2.68e-23!71;UBERON:0003075!2.68e-23!71;UBERON:0007284!2.68e-23!71;UBERON:0000073!3.31e-23!75;UBERON:0001016!3.31e-23!75;UBERON:0001049!3.40e-23!52;UBERON:0005068!3.40e-23!52;UBERON:0006241!3.40e-23!52;UBERON:0007135!3.40e-23!52;UBERON:0004121!6.91e-23!102;UBERON:0000924!6.91e-23!102;UBERON:0006601!6.91e-23!102;UBERON:0000033!1.08e-21!63;UBERON:0000955!2.67e-21!50;UBERON:0006238!2.67e-21!50;UBERON:0002616!8.31e-21!49;UBERON:0003056!3.31e-19!49;UBERON:0003080!1.19e-18!40;UBERON:0002020!4.43e-18!34;UBERON:0002780!5.05e-18!39;UBERON:0001890!5.05e-18!39;UBERON:0006240!5.05e-18!39;UBERON:0002791!1.19e-14!29;UBERON:0003528!1.19e-14!29;UBERON:0001893!1.19e-14!29;UBERON:0000468!3.51e-10!333;UBERON:0000956!5.91e-10!21;UBERON:0001869!5.91e-10!21;UBERON:0000203!5.91e-10!21;UBERON:0007811!2.11e-09!86;UBERON:0000153!4.71e-09!94;UBERON:0004111!2.57e-08!122;UBERON:0000025!5.25e-08!114;UBERON:0002619!5.43e-08!17;UBERON:0000922!1.79e-07!328 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.06e-29,54;UBERON:0001017,1.11e-28,73;UBERON:0001049,1.13e-27,52;UBERON:0005068,1.13e-27,52;UBERON:0006241,1.13e-27,52;UBERON:0007135,1.13e-27,52;UBERON:0001016,4.28e-27,75;UBERON:0002346,1.24e-26,64;UBERON:0003075,1.24e-26,64;UBERON:0007284,1.24e-26,64;UBERON:0004121,5.09e-24,95;UBERON:0000924,5.09e-24,95;UBERON:0006601,5.09e-24,95;UBERON:0000955,2.43e-23,47;UBERON:0006238,2.43e-23,47;UBERON:0010371,4.93e-23,73;UBERON:0002616,9.19e-23,46;UBERON:0003056,4.04e-22,49;UBERON:0003080,7.38e-22,40;UBERON:0002020,3.53e-21,34;UBERON:0002780,4.12e-21,39;UBERON:0001890,4.12e-21,39;UBERON:0006240,4.12e-21,39;UBERON:0010314,8.72e-19,92;UBERON:0003528,4.20e-17,29;UBERON:0002791,4.20e-17,29;UBERON:0001893,4.20e-17,29;UBERON:0000956,1.58e-11,21;UBERON:0001869,1.58e-11,21;UBERON:0000203,1.58e-11,21;UBERON:0002619,3.37e-09,17;UBERON:0004111,1.02e-07,122;UBERON:0000025,1.15e-07,114;UBERON:0002420,6.64e-07,8;UBERON:0007245,6.64e-07,8;UBERON:0010009,6.64e-07,8;UBERON:0010011,6.64e-07,8;UBERON:0000454,6.64e-07,8 | |||
|phase1_expression=3.36312578920067,0,0.909998478779072,0,0,0.671517087647559,0.233612640595526,0.516493293766305,0.140788722151667,0,0.171217968225505,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0,0.22940928106717,0.57423196411502,0.430761996159075,0,0.190023419456374,0.504060259519861,0.665191531965914,0,0,0,2.3108129580102,0.997407872150954,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0.436050312760893,1.5378032791413,1.36100929351998,0.55994568650145,0,0,0,0,0.771778308107841,0.85960031981627,0,11.3297218081375,3.70293685490423,8.23980824558033,1.0165335962074,0.889294796111139,0,0.988866362566974,0.7104801149461,1.79760066311043,2.30530983192933,5.91030790158323,3.24014251996058,3.57552434297349,16.2821061110168,6.84692476950002,5.26710436624302,3.1629005436018,4.5960939330501,4.40463523997555,6.12899222808901,5.06901559745603,6.85808696197008,3.65950574409639,13.5437476344758,6.70039197603314,3.93933827022176,8.86229837105499,8.83885756421003,9.96601765593721,7.26957838718672,0.302904773332736,0.302286240427142,2.02905142091174,0,0,0,0.649776417447669,0.448026887097336,0.421333260395256,0,0,0,2.53518155598025,0,0,0,0.432982082022428,0.760079596425296,1.01104889002957,0.34255163915718,0.258937883647172,1.7813056687779,2.08182392119363,1.21786191324856,0.691846491768175,0.753613202763113,1.64624189989987,1.75933227861546,2.22475470960936,0.289198713839823,0,1.61766849947409,0.441683036920787,0,1.86391761218122,5.27005434620785,8.16842156572475,1.02182822083437,0,0,0,6.5907881338122,3.66000482254901,14.3245961408665,5.9100268865374,5.37002460393694,5.194701113989,6.81413304884582,2.24046600470696,0.622034853050465,0.505445516867349,1.26265113531884,0.780722657776222,2.5289231487682,2.16074555766419,1.20563854268572,3.6739709541717,1.7935920839879,3.84177070694888,0.258703370739016,0.646703978798527,1.13463648100692,1.58356011747554,0.657587197282725,1.39023624612799,1.0447564995665,0.823128545631774,1.19420560091096,0,0,0,0.414251545071004,0.469052119962192,0.180062061461015,1.18372367792605,0.590292695242212,0.771335564436891,1.16266972375204,0.804820204198858,0.817357396570186,0.822799249567402,1.14917224855367,1.54030738137126,1.31579988682799,0.439100230582101,0.939444931322602,6.9395683026162,8.84979666461846,0.991256348951394,0.793351699990633,0.639864751605702,0.928946687441754,0.902072229254653,1.00841762311671,0.889512175379481,1.71203063501303,0.949058123089023,1.31759163779209,1.25667604400135,1.39269530428806,1.75467678407208,0,0.648414149624083,1.39398891278057,0.379335801906163,0.685491075658373,0,0,0.775809948670503,1.05203729835478,1.20149420536089,0.147610147979602,0.784993639206874,0.740382983530803,0.592905254174298,0.500535317148282,0,0,0.405720242777006,0.482354319504834,0,0.575392274901621,0.162135226775035,1.09824565275233,0,1.11642284300551,0.624075346229121,0.757736633841335,0.538192240565737,2.8946611281802,1.84753190166605,0.757965647081939,0.651859905768103,1.01847051465113,0.234690248288502,0.670025029767263,1.6663054862021,2.92700471786698,0.630540576424764,1.32878813789265,1.2756381492599,0.81931657357869,0.518054945597687,0.723245292907558,0,0,0.491764273019036,0.551873492609465,5.29816946959713,5.62616095642575,0,0.504941854408746,0.631016438832513,0.390438744296638,1.72338718186239,0,1.55959071857676,1.69845918473299,0.809621403349789,1.46127928955656,0.790575555893047,3.53453448063988,0.567760340833074,1.95872164033981,1.46598263418218,1.48473110675282,0,0.242780636154981,0.604647113929502,0.565815239267694,0.295301892880773,1.84461088766356,3.10113951801865,2.90826983582004,1.42598951353889,1.26414703174326,1.05418608574999,1.03135543248187,1.70219802876894,2.16073312837572,1.16422815404479,1.92903331528433,1.77340233642274,3.21063871683727,3.1264313914403,6.69822888052118,0.469343416127421,1.0591603543191,0.882113592219848,0.98931751764888,0.645857706783622,1.08563264870681,0.716234064018819,0.164140899745061,0.582961673259701,5.19190845629427,0,1.44470807574256,0.555583582109135,0,0,0.457556346413045,0,0,0,0,0.158167996790568,1.01659733563424,0.432021363287205,0.209088296014469,1.52853794622324,0.809186078308924,1.81837602595739,1.04702376793612,0.90730481304255,0.621339313086926,0.56369293868419,2.0932316446157,0.827292452285488,0.583353565032143,1.54991788173277,1.01373675294467,1.5256441023948,1.43224823328345,1.25831213310853,0.724752362478018,1.15212002503146,0.316011120628178,1.82452693761148,0.205421914329655,0.25984164595559,0.358053391334963,0,0.480781798079875,0.590758108698309,1.00966449948148,0.381034033274999,0.302478555410522,0.38983152295901,0.0962118416403295,0.350630706544707,0.226730383615211,0,0.448569283047378,0.167884616364078,1.9318959403219,0.563047426353546,0.915758121336325,0.428736758158132,1.50471631210609,5.64751842617067,5.52390283808612,1.14579102687879,7.73339320546594,4.7955776383945,7.55393897389701,6.07520250208625,2.2516060161211,3.62513927187364,1.55328093525546,0.103787347584177,1.19707462020309,2.21953687480374,0.486213434136588,0.628839487883947,2.02227859295016,2.22246727801615,0.824140228955577,2.24643446714271,1.76888048234658,0.50695859978048,2.07488975524684,1.77918864192777,1.85672941974121,3.15895079255873,1.42888107384922,2.20180219295225,2.70072908649187,2.88460130562315,2.06078488188156,0.685738504770831,1.77475806159337,0.953744759789284,1.45346416632329,1.69396884747595,1.69229215783353,2.37806364734604,1.57841826862706,1.7654534799962,0,3.08451047122853,2.85662998889134,1.63692417267876,1.70430525304563,1.35034627686799,5.24602213669686,1.40358965067245,2.57845264857958,0.956441660344217,1.54413993383661,0.927471342481686 | |||
|short_description=p5@Atp9a | |||
}} |
Revision as of 14:58, 4 August 2015
Short description: | p5@Atp9a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Atp9a_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -14bp_to_ENSMUST00000109176_5end |
EntrezGene: | 11981 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.13e-17 | 23 |
neuroblast (sensu Vertebrata) | 9.13e-17 | 23 |
neuron | 9.55e-13 | 33 |
neuronal stem cell | 9.55e-13 | 33 |
neuroblast | 9.55e-13 | 33 |
electrically signaling cell | 9.55e-13 | 33 |
ectodermal cell | 3.86e-10 | 44 |
neurectodermal cell | 3.86e-10 | 44 |
neural cell | 9.59e-10 | 43 |
electrically responsive cell | 7.20e-09 | 39 |
electrically active cell | 7.20e-09 | 39 |