FFCP PHASE1:Mm9::chr10:77069323..77069398,+: Difference between revisions
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{{FFCP|EntrezGene=20610|HGNC=|UniProt=Q9Z172|association_with_transcript=7bp_to_ENSMUST00000099538_5end|description=CAGE_peak_3_at_Sumo3_5end|id=chr10:77069323..77069398,+|ontology_enrichment_celltype=CL:0000063!5.36e-15!66;CL:0000219!2.35e-13!54;CL:0002320!1.59e-12!46;CL:0000134!1.59e-12!46;CL:0002031!1.37e-08!25;CL:0000988!1.73e-08!32;CL:0002032!1.73e-08!32;CL:0000037!1.73e-08!32;CL:0000566!1.73e-08!32;CL:0000837!1.73e-08!32;CL:0000838!3.10e-08!12;CL:0000084!1.39e-07!11;CL:0000827!1.39e-07!11;CL:0000542!3.28e-07!13;CL:0000051!3.28e-07!13;CL:0000791!5.67e-07!9;CL:0000789!5.67e-07!9;CL:0002420!5.67e-07!9;CL:0002419!5.67e-07!9;CL:0000790!5.67e-07!9|ontology_enrichment_celltype_v019_2=CL:0000219,9.96e-14,54;CL:0002320,6.72e-13,46;CL:0000134,6.72e-13,46;CL:0002031,5.69e-09,25;CL:0000988,7.85e-09,32;CL:0002032,7.85e-09,32;CL:0000037,7.85e-09,32;CL:0000837,7.85e-09,32;CL:0000838,2.73e-08,12;CL:0000084,1.24e-07,11;CL:0000827,1.24e-07,11;CL:0000542,2.94e-07,13;CL:0000051,2.94e-07,13;CL:0000791,5.12e-07,9;CL:0000789,5.12e-07,9;CL:0002420,5.12e-07,9;CL:0002419,5.12e-07,9;CL:0000790,5.12e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!4.05e-13!70;UBERON:0004119!4.46e-13!130;UBERON:0000925!4.46e-13!130;UBERON:0006595!4.46e-13!130;UBERON:0002193!5.08e-13!48;UBERON:0002384!1.59e-12!46;UBERON:0001007!2.26e-12!128;UBERON:0001555!2.26e-12!128;UBERON:0007026!2.26e-12!128;UBERON:0002390!4.61e-12!45;UBERON:0003061!4.61e-12!45;UBERON:0004921!6.28e-12!126;UBERON:0004185!6.28e-12!126;UBERON:0000926!3.62e-11!193;UBERON:0004120!3.62e-11!193;UBERON:0006603!3.62e-11!193;UBERON:0003104!1.04e-10!131;UBERON:0009142!1.04e-10!131;UBERON:0000077!2.64e-10!97;UBERON:0000490!2.96e-10!66;UBERON:0003929!4.24e-09!55;UBERON:0001041!6.37e-09!92;UBERON:0004177!6.54e-09!29;UBERON:0005057!9.18e-09!51;UBERON:0000949!2.23e-08!72;UBERON:0003408!2.87e-08!24;UBERON:0000072!4.30e-08!27;UBERON:0002370!7.18e-08!23;UBERON:0000974!7.18e-08!23;UBERON:0004807!7.18e-08!23;UBERON:0005058!7.18e-08!23;UBERON:0003351!7.18e-08!23;UBERON:0009113!7.18e-08!23;UBERON:0003295!7.18e-08!23;UBERON:0009722!7.18e-08!23;UBERON:0005562!7.18e-08!23;UBERON:0007690!7.18e-08!23;UBERON:0002530!8.17e-08!65;UBERON:0006562!1.23e-07!24;UBERON:0001557!1.23e-07!24;UBERON:0001042!1.23e-07!24;UBERON:0008814!1.23e-07!24;UBERON:0009145!1.23e-07!24;UBERON:0005911!6.14e-07!69|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.89e-13,48;UBERON:0002405,2.89e-13,48;UBERON:0002384,6.72e-13,46;UBERON:0002390,2.68e-12,45;UBERON:0003061,2.68e-12,45;UBERON:0000077,5.38e-11,35;UBERON:0000490,3.46e-10,66;UBERON:0004119,3.97e-10,118;UBERON:0000925,3.97e-10,118;UBERON:0006595,3.97e-10,118;UBERON:0001007,1.67e-09,116;UBERON:0001555,1.67e-09,116;UBERON:0007026,1.67e-09,116;UBERON:0004921,4.11e-09,114;UBERON:0003929,5.07e-09,55;UBERON:0004177,5.68e-09,29;UBERON:0005057,5.68e-09,29;UBERON:0000926,1.83e-08,120;UBERON:0004120,1.83e-08,120;UBERON:0006603,1.83e-08,120;UBERON:0000949,2.32e-08,72;UBERON:0003408,2.53e-08,24;UBERON:0000072,3.80e-08,27;UBERON:0002370,6.37e-08,23;UBERON:0000974,6.37e-08,23;UBERON:0004807,6.37e-08,23;UBERON:0005058,6.37e-08,23;UBERON:0003351,6.37e-08,23;UBERON:0009113,6.37e-08,23;UBERON:0003295,6.37e-08,23;UBERON:0009722,6.37e-08,23;UBERON:0005562,6.37e-08,23;UBERON:0007690,6.37e-08,23;UBERON:0002530,8.60e-08,65;UBERON:0006562,1.10e-07,24;UBERON:0001557,1.10e-07,24;UBERON:0001042,1.10e-07,24;UBERON:0008814,1.10e-07,24;UBERON:0009145,1.10e-07,24;UBERON:0005911,9.96e-07,69|phase1_expression=1.44133962394315,2.44282785347553,2.27499619694768,4.23449895829562,1.50268718983904,5.70789524500425,3.73780224952841,13.2997023144824,9.57363310631334,8.19225842126977,12.6701296486874,9.81197555642638,14.3808613142213,13.8124235822016,5.99597571268193,3.03712901084739,2.79824751251259,10.4102514568218,9.73512478600745,13.580468857537,3.48677489619386,5.46100231604869,6.00759515019551,3.19984845586813,5.73523202667925,4.59385571292016,3.4460959692726,2.15471232685889,4.3705386474966,4.03248207615889,4.8780712344167,12.7006134691926,7.99584223859941,0,7.79899373328441,6.64938581433969,4.28755648150975,2.09265815368454,3.906676722619,4.71171369576418,4.70585190424811,4.78131839470912,8.25367600152961,15.9888958828983,14.3955242331711,8.9937908559224,10.9534788208725,4.14247797122848,5.93152693383074,5.05517737593137,3.91961980551015,4.31257693094915,12.9192606664457,8.70434570413613,13.1076581665561,1.80081605225163,3.72493471920384,3.09403255366465,0.606949382578793,1.5869729378161,0,5.42151251310611,1.77858959222228,10.7987966073768,6.92206453796882,7.104801149461,5.09320187881288,2.30530983192933,0.622137673850866,0.540023753326763,0.630974884054146,0.571301968807607,0.220868540951614,0.61245399607477,0.383381884072945,0,0,1.53224805702225,1.22885226604995,0.263772575460388,0.548925861614458,0.52091337055676,0.837548997004143,0.56276261003168,2.13917546887534,1.17851434189467,0.854230084794618,0.372798891650601,1.4387976733305,1.43585964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09559758,1.15933917810211|short_description=p3@Sumo3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20610 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9Z172 | |||
|association_with_transcript=7bp_to_ENSMUST00000099538_5end | |||
|cluster_id=chr10:77069323..77069398,+ | |||
|description=CAGE_peak_3_at_Sumo3_5end | |||
|id=chr10:77069323..77069398,+ | |||
|ontology_enrichment_celltype=CL:0000063!5.36e-15!66;CL:0000219!2.35e-13!54;CL:0002320!1.59e-12!46;CL:0000134!1.59e-12!46;CL:0002031!1.37e-08!25;CL:0000988!1.73e-08!32;CL:0002032!1.73e-08!32;CL:0000037!1.73e-08!32;CL:0000566!1.73e-08!32;CL:0000837!1.73e-08!32;CL:0000838!3.10e-08!12;CL:0000084!1.39e-07!11;CL:0000827!1.39e-07!11;CL:0000542!3.28e-07!13;CL:0000051!3.28e-07!13;CL:0000791!5.67e-07!9;CL:0000789!5.67e-07!9;CL:0002420!5.67e-07!9;CL:0002419!5.67e-07!9;CL:0000790!5.67e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,9.96e-14,54;CL:0002320,6.72e-13,46;CL:0000134,6.72e-13,46;CL:0002031,5.69e-09,25;CL:0000988,7.85e-09,32;CL:0002032,7.85e-09,32;CL:0000037,7.85e-09,32;CL:0000837,7.85e-09,32;CL:0000838,2.73e-08,12;CL:0000084,1.24e-07,11;CL:0000827,1.24e-07,11;CL:0000542,2.94e-07,13;CL:0000051,2.94e-07,13;CL:0000791,5.12e-07,9;CL:0000789,5.12e-07,9;CL:0002420,5.12e-07,9;CL:0002419,5.12e-07,9;CL:0000790,5.12e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!4.05e-13!70;UBERON:0004119!4.46e-13!130;UBERON:0000925!4.46e-13!130;UBERON:0006595!4.46e-13!130;UBERON:0002193!5.08e-13!48;UBERON:0002384!1.59e-12!46;UBERON:0001007!2.26e-12!128;UBERON:0001555!2.26e-12!128;UBERON:0007026!2.26e-12!128;UBERON:0002390!4.61e-12!45;UBERON:0003061!4.61e-12!45;UBERON:0004921!6.28e-12!126;UBERON:0004185!6.28e-12!126;UBERON:0000926!3.62e-11!193;UBERON:0004120!3.62e-11!193;UBERON:0006603!3.62e-11!193;UBERON:0003104!1.04e-10!131;UBERON:0009142!1.04e-10!131;UBERON:0000077!2.64e-10!97;UBERON:0000490!2.96e-10!66;UBERON:0003929!4.24e-09!55;UBERON:0001041!6.37e-09!92;UBERON:0004177!6.54e-09!29;UBERON:0005057!9.18e-09!51;UBERON:0000949!2.23e-08!72;UBERON:0003408!2.87e-08!24;UBERON:0000072!4.30e-08!27;UBERON:0002370!7.18e-08!23;UBERON:0000974!7.18e-08!23;UBERON:0004807!7.18e-08!23;UBERON:0005058!7.18e-08!23;UBERON:0003351!7.18e-08!23;UBERON:0009113!7.18e-08!23;UBERON:0003295!7.18e-08!23;UBERON:0009722!7.18e-08!23;UBERON:0005562!7.18e-08!23;UBERON:0007690!7.18e-08!23;UBERON:0002530!8.17e-08!65;UBERON:0006562!1.23e-07!24;UBERON:0001557!1.23e-07!24;UBERON:0001042!1.23e-07!24;UBERON:0008814!1.23e-07!24;UBERON:0009145!1.23e-07!24;UBERON:0005911!6.14e-07!69 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.89e-13,48;UBERON:0002405,2.89e-13,48;UBERON:0002384,6.72e-13,46;UBERON:0002390,2.68e-12,45;UBERON:0003061,2.68e-12,45;UBERON:0000077,5.38e-11,35;UBERON:0000490,3.46e-10,66;UBERON:0004119,3.97e-10,118;UBERON:0000925,3.97e-10,118;UBERON:0006595,3.97e-10,118;UBERON:0001007,1.67e-09,116;UBERON:0001555,1.67e-09,116;UBERON:0007026,1.67e-09,116;UBERON:0004921,4.11e-09,114;UBERON:0003929,5.07e-09,55;UBERON:0004177,5.68e-09,29;UBERON:0005057,5.68e-09,29;UBERON:0000926,1.83e-08,120;UBERON:0004120,1.83e-08,120;UBERON:0006603,1.83e-08,120;UBERON:0000949,2.32e-08,72;UBERON:0003408,2.53e-08,24;UBERON:0000072,3.80e-08,27;UBERON:0002370,6.37e-08,23;UBERON:0000974,6.37e-08,23;UBERON:0004807,6.37e-08,23;UBERON:0005058,6.37e-08,23;UBERON:0003351,6.37e-08,23;UBERON:0009113,6.37e-08,23;UBERON:0003295,6.37e-08,23;UBERON:0009722,6.37e-08,23;UBERON:0005562,6.37e-08,23;UBERON:0007690,6.37e-08,23;UBERON:0002530,8.60e-08,65;UBERON:0006562,1.10e-07,24;UBERON:0001557,1.10e-07,24;UBERON:0001042,1.10e-07,24;UBERON:0008814,1.10e-07,24;UBERON:0009145,1.10e-07,24;UBERON:0005911,9.96e-07,69 | |||
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| |||
|short_description=p3@Sumo3 | |||
}} |
Revision as of 17:52, 4 August 2015
Short description: | p3@Sumo3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Sumo3_5end |
Coexpression cluster: | NA |
Association with transcript: | 7bp_to_ENSMUST00000099538_5end |
EntrezGene: | 20610 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 9.96e-14 | 54 |
connective tissue cell | 6.72e-13 | 46 |
mesenchymal cell | 6.72e-13 | 46 |
hematopoietic lineage restricted progenitor cell | 5.69e-09 | 25 |
hematopoietic cell | 7.85e-09 | 32 |
hematopoietic oligopotent progenitor cell | 7.85e-09 | 32 |
hematopoietic stem cell | 7.85e-09 | 32 |
hematopoietic multipotent progenitor cell | 7.85e-09 | 32 |
lymphoid lineage restricted progenitor cell | 2.73e-08 | 12 |
T cell | 1.24e-07 | 11 |
pro-T cell | 1.24e-07 | 11 |
lymphocyte | 2.94e-07 | 13 |
common lymphoid progenitor | 2.94e-07 | 13 |
mature alpha-beta T cell | 5.12e-07 | 9 |
alpha-beta T cell | 5.12e-07 | 9 |
immature T cell | 5.12e-07 | 9 |
mature T cell | 5.12e-07 | 9 |
immature alpha-beta T cell | 5.12e-07 | 9 |