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FFCP PHASE1:Mm9::chr15:101966656..101966661,-: Difference between revisions

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{{FFCP|EntrezGene=223918|HGNC=|UniProt=E9Q9B3|association_with_transcript=3bp_to_ENSMUST00000154032_5end|description=CAGE_peak_2_at_Spryd3_5end|id=chr15:101966656..101966661,-|ontology_enrichment_celltype=CL:0000117!1.55e-07!23;CL:0000337!1.55e-07!23;CL:0000055!3.51e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,4.41e-08,23;CL:0000337,4.41e-08,23;CL:0002614,3.10e-07,3;CL:0002610,8.11e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!4.20e-13!75;UBERON:0001016!4.20e-13!75;UBERON:0001017!1.55e-12!73;UBERON:0005743!1.55e-12!73;UBERON:0001049!2.75e-11!52;UBERON:0005068!2.75e-11!52;UBERON:0006241!2.75e-11!52;UBERON:0007135!2.75e-11!52;UBERON:0000955!8.62e-11!50;UBERON:0006238!8.62e-11!50;UBERON:0002616!3.03e-10!49;UBERON:0002020!3.70e-10!34;UBERON:0004121!3.06e-09!102;UBERON:0000924!3.06e-09!102;UBERON:0006601!3.06e-09!102;UBERON:0000033!9.43e-09!63;UBERON:0002791!4.51e-08!29;UBERON:0003528!4.51e-08!29;UBERON:0001893!4.51e-08!29;UBERON:0004111!5.21e-08!122;UBERON:0000025!1.06e-07!114;UBERON:0002346!1.20e-07!71;UBERON:0003075!1.20e-07!71;UBERON:0007284!1.20e-07!71;UBERON:0003080!4.25e-07!40|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.56e-24,73;UBERON:0001016,6.94e-23,75;UBERON:0000073,8.44e-19,54;UBERON:0004121,1.78e-17,95;UBERON:0000924,1.78e-17,95;UBERON:0006601,1.78e-17,95;UBERON:0000955,7.78e-17,47;UBERON:0006238,7.78e-17,47;UBERON:0001049,2.44e-16,52;UBERON:0005068,2.44e-16,52;UBERON:0006241,2.44e-16,52;UBERON:0007135,2.44e-16,52;UBERON:0002616,1.61e-15,46;UBERON:0003080,2.91e-13,40;UBERON:0002780,3.50e-12,39;UBERON:0001890,3.50e-12,39;UBERON:0006240,3.50e-12,39;UBERON:0002346,4.10e-12,64;UBERON:0003075,4.10e-12,64;UBERON:0007284,4.10e-12,64;UBERON:0003528,1.91e-10,29;UBERON:0002791,1.91e-10,29;UBERON:0001893,1.91e-10,29;UBERON:0003056,5.96e-10,49;UBERON:0002020,6.44e-10,34;UBERON:0010371,7.08e-10,73;UBERON:0002950,1.08e-08,4;UBERON:0001891,1.08e-08,4;UBERON:0009616,1.08e-08,4;UBERON:0010286,1.08e-08,4;UBERON:0002021,1.53e-08,10;UBERON:0000411,1.53e-08,10;UBERON:0001950,1.53e-08,10;UBERON:0010314,1.91e-07,92;UBERON:0002038,3.10e-07,3;UBERON:0009663,3.10e-07,3;UBERON:0009661,3.10e-07,3;UBERON:0000125,3.10e-07,3;UBERON:0002308,3.10e-07,3;UBERON:0004684,8.11e-07,3;UBERON:0002275,8.11e-07,3|phase1_expression=0.480446541314382,0.697950815278722,0.909998478779072,0.30246421130683,0,0.839396359559449,0.467225281191051,0.258246646883153,0,0,0,0.239316476986009,0.342401459862411,0.0874204024189974,0,0.404950534779652,0,0.157731082679119,0.137114433605739,1.27316895539409,0.935476191661768,0.297872853602656,0.261199789138935,0.47997726838022,0.91763712426868,1.14846392823004,0,0.430942465371778,0.380046838912748,0.504060259519861,0.221730510655305,0.635030673459631,0,0,0.577703239502549,0.332469290716985,0.204169356262369,1.25559489221072,0,1.0470474879476,0,0,1.45653105909346,0.881277725829041,0.608261587317087,0.917733760808408,0.782391344348039,0.218025156380447,0.439372365468944,0.972149495371417,0.979904951377538,4.31257693094915,0.167782606057736,0,0.336093799142464,0.514518872071894,0,1.54701627683233,1.01158230429799,1.05798195854407,1.26766280701236,0.338844532069132,1.77858959222228,0.449949858640699,0,4.9733608046227,1.49800055259202,1.53687322128622,0.103689612308478,0,0.841299845405528,2.57085885963423,0.883474163806454,0.244981598429908,0.670918297127655,0.919218786610021,1.10115880999389,4.08599481872601,3.68655679814984,0.395658863190582,1.28082701043374,0.52091337055676,3.90856198601933,1.68828783009504,3.81995619442025,0.883885756421003,0.996601765593721,0.931997229126503,0.605809546665472,0.755715601067855,0.289864488701678,0.860423876981386,0.679971333707751,0.539703191637817,0,0,0.421333260395256,0.340860645156116,0.519572009205738,0.35333957451034,0.281686839553361,0,0,0,0.216491041011214,0,0.505524445014783,0.34255163915718,0,0.148442139064825,0.520455980298408,0.304465478312141,0.461230994512117,0.452167921657868,0.352766121407114,0.251333182659351,0.741584903203122,0.433798070759735,0,0.161766849947409,0,0,0,0.585561594023094,1.25668024088073,0.255457055208591,0.11981512450592,0,0.127070227073065,1.3481157546434,2.74500361691176,0.502617408451458,2.08589184230732,1.53429274398198,1.87009240103604,1.1356888414743,0.203678727700633,0.124406970610093,0.252722758433675,0.631325567659422,0.260240885925407,0,0.180062129805349,0,0.272145996605311,0.12811372028485,0.187403449119458,0.776110112217047,0,0,0.351902248327898,0.43839146485515,0.278047249225598,0,0.411564272815887,0,0,0.772043721344145,0.284163499395593,0.414251545071004,0.234526059981096,0.540186184383045,0,0.393528463494808,0.617068451549513,0.232533944750408,0.268273401399619,0.116765342367169,0.658239399653922,0,0.648550476366846,0.438599962275997,0.219550115291051,0.402619256281115,1.89260953707715,0.514523061896422,0,0.264450566663544,0,0,0.38660238396628,0.605050573870028,0.22237804384487,0.380451252225118,0,0.329397909448022,0.754005626400808,0.596869416123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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:223918
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:E9Q9B3
|association_with_transcript=3bp_to_ENSMUST00000154032_5end
|cluster_id=chr15:101966656..101966661,-
|description=CAGE_peak_2_at_Spryd3_5end
|id=chr15:101966656..101966661,-
|ontology_enrichment_celltype=CL:0000117!1.55e-07!23;CL:0000337!1.55e-07!23;CL:0000055!3.51e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,4.41e-08,23;CL:0000337,4.41e-08,23;CL:0002614,3.10e-07,3;CL:0002610,8.11e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!4.20e-13!75;UBERON:0001016!4.20e-13!75;UBERON:0001017!1.55e-12!73;UBERON:0005743!1.55e-12!73;UBERON:0001049!2.75e-11!52;UBERON:0005068!2.75e-11!52;UBERON:0006241!2.75e-11!52;UBERON:0007135!2.75e-11!52;UBERON:0000955!8.62e-11!50;UBERON:0006238!8.62e-11!50;UBERON:0002616!3.03e-10!49;UBERON:0002020!3.70e-10!34;UBERON:0004121!3.06e-09!102;UBERON:0000924!3.06e-09!102;UBERON:0006601!3.06e-09!102;UBERON:0000033!9.43e-09!63;UBERON:0002791!4.51e-08!29;UBERON:0003528!4.51e-08!29;UBERON:0001893!4.51e-08!29;UBERON:0004111!5.21e-08!122;UBERON:0000025!1.06e-07!114;UBERON:0002346!1.20e-07!71;UBERON:0003075!1.20e-07!71;UBERON:0007284!1.20e-07!71;UBERON:0003080!4.25e-07!40
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.56e-24,73;UBERON:0001016,6.94e-23,75;UBERON:0000073,8.44e-19,54;UBERON:0004121,1.78e-17,95;UBERON:0000924,1.78e-17,95;UBERON:0006601,1.78e-17,95;UBERON:0000955,7.78e-17,47;UBERON:0006238,7.78e-17,47;UBERON:0001049,2.44e-16,52;UBERON:0005068,2.44e-16,52;UBERON:0006241,2.44e-16,52;UBERON:0007135,2.44e-16,52;UBERON:0002616,1.61e-15,46;UBERON:0003080,2.91e-13,40;UBERON:0002780,3.50e-12,39;UBERON:0001890,3.50e-12,39;UBERON:0006240,3.50e-12,39;UBERON:0002346,4.10e-12,64;UBERON:0003075,4.10e-12,64;UBERON:0007284,4.10e-12,64;UBERON:0003528,1.91e-10,29;UBERON:0002791,1.91e-10,29;UBERON:0001893,1.91e-10,29;UBERON:0003056,5.96e-10,49;UBERON:0002020,6.44e-10,34;UBERON:0010371,7.08e-10,73;UBERON:0002950,1.08e-08,4;UBERON:0001891,1.08e-08,4;UBERON:0009616,1.08e-08,4;UBERON:0010286,1.08e-08,4;UBERON:0002021,1.53e-08,10;UBERON:0000411,1.53e-08,10;UBERON:0001950,1.53e-08,10;UBERON:0010314,1.91e-07,92;UBERON:0002038,3.10e-07,3;UBERON:0009663,3.10e-07,3;UBERON:0009661,3.10e-07,3;UBERON:0000125,3.10e-07,3;UBERON:0002308,3.10e-07,3;UBERON:0004684,8.11e-07,3;UBERON:0002275,8.11e-07,3
|phase1_expression=0.480446541314382,0.697950815278722,0.909998478779072,0.30246421130683,0,0.839396359559449,0.467225281191051,0.258246646883153,0,0,0,0.239316476986009,0.342401459862411,0.0874204024189974,0,0.404950534779652,0,0.157731082679119,0.137114433605739,1.27316895539409,0.935476191661768,0.297872853602656,0.261199789138935,0.47997726838022,0.91763712426868,1.14846392823004,0,0.430942465371778,0.380046838912748,0.504060259519861,0.221730510655305,0.635030673459631,0,0,0.577703239502549,0.332469290716985,0.204169356262369,1.25559489221072,0,1.0470474879476,0,0,1.45653105909346,0.881277725829041,0.608261587317087,0.917733760808408,0.782391344348039,0.218025156380447,0.439372365468944,0.972149495371417,0.979904951377538,4.31257693094915,0.167782606057736,0,0.336093799142464,0.514518872071894,0,1.54701627683233,1.01158230429799,1.05798195854407,1.26766280701236,0.338844532069132,1.77858959222228,0.449949858640699,0,4.9733608046227,1.49800055259202,1.53687322128622,0.103689612308478,0,0.841299845405528,2.57085885963423,0.883474163806454,0.244981598429908,0.670918297127655,0.919218786610021,1.10115880999389,4.08599481872601,3.68655679814984,0.395658863190582,1.28082701043374,0.52091337055676,3.90856198601933,1.68828783009504,3.81995619442025,0.883885756421003,0.996601765593721,0.931997229126503,0.605809546665472,0.755715601067855,0.289864488701678,0.860423876981386,0.679971333707751,0.539703191637817,0,0,0.421333260395256,0.340860645156116,0.519572009205738,0.35333957451034,0.281686839553361,0,0,0,0.216491041011214,0,0.505524445014783,0.34255163915718,0,0.148442139064825,0.520455980298408,0.304465478312141,0.461230994512117,0.452167921657868,0.352766121407114,0.251333182659351,0.741584903203122,0.433798070759735,0,0.161766849947409,0,0,0,0.585561594023094,1.25668024088073,0.255457055208591,0.11981512450592,0,0.127070227073065,1.3481157546434,2.74500361691176,0.502617408451458,2.08589184230732,1.53429274398198,1.87009240103604,1.1356888414743,0.203678727700633,0.124406970610093,0.252722758433675,0.631325567659422,0.260240885925407,0,0.180062129805349,0,0.272145996605311,0.12811372028485,0.187403449119458,0.776110112217047,0,0,0.351902248327898,0.43839146485515,0.278047249225598,0,0.411564272815887,0,0,0.772043721344145,0.284163499395593,0.414251545071004,0.234526059981096,0.540186184383045,0,0.393528463494808,0.617068451549513,0.232533944750408,0.268273401399619,0.116765342367169,0.658239399653922,0,0.648550476366846,0.438599962275997,0.219550115291051,0.402619256281115,1.89260953707715,0.514523061896422,0,0.264450566663544,0,0,0.38660238396628,0.605050573870028,0.22237804384487,0.380451252225118,0,0.329397909448022,0.754005626400808,0.596869416123452,0.58489226135736,0,0.864552199498777,0.597423819763102,0,0,0,0,0,0.210407459670956,0.379419222745544,0.295220295959204,0.470996183524124,0.123397163921801,0.592905254174298,0.333690211432188,0.982794975566015,0.224862112384854,0.202860121388503,0.241177159752417,0.50925170356284,0.575392274901621,0.162135226775035,0.823684239564244,0,0.744281895337007,0,0.252578877947112,0.358794827043824,0.964887042726734,0.369506380333209,0,0.162964976442026,0.339490171550376,0.234690248288502,0.167506257441816,0.476087281772027,0.585400943573396,0.157635144106191,0,0.637819074629948,0.163863314715738,0.172684981865896,0.578596234326046,0,0.54390568381871,0,0.551873492609465,3.37156238974363,1.87538698547525,0.163934945376675,0.252470927204373,0.315508219416257,0,0,0,0.222798674082394,0,0,0.584511715822624,0,2.24924921495265,0,0.712262414669021,0,0.164970122972535,0,0.242780636154981,0.604647113929502,0.565815239267694,0.590603785761546,0.307435147943927,0.258428293168221,0.363533729477506,1.42598951353889,0.632073515871632,2.10837217149998,0,3.06395645178409,0.18006109403131,0,0,0,0.356737635204141,0,1.2178597964584,0.469343416127421,1.27099242518292,0.661585194164886,0,0,0.301564624640779,0,0.164140899745061,0.582961673259701,2.96680483216816,0,0.412773735926445,0.185194527369712,0.188368457004691,0.136694227721025,0.457556346413045,0.339956859987711,0,0.414599921413271,0,0.158167996790568,0,0.216010681643603,1.25452977608681,0.436725127492355,0.674321731924103,0.41326727862668,0.523511883968059,0.518459893167171,1.24267862617385,0,0.149516546043979,0,0,0.258319646955462,0,0.234714477291508,0,0.314578033277133,0.483168241652012,0,0.316011120628178,0.202725215290164,0.410843828659309,0.25984164595559,0.179026695667481,0.39736270956253,0,0.147689527174577,0.201932899896295,0.15241361331,0.201652370273681,0.194915761479505,0.0962118416403295,0.233753804363138,0.226730383615211,0,0.358855426437903,0.503653849092235,0.19318959403219,0.563047426353546,0.549454872801795,0.214368379079066,0.501572104035363,1.6942555278512,1.84130094602871,0,1.89038500578056,0.685082519770642,1.5107877947794,1.35004500046361,0.900642406448441,1.81256963593682,1.03552062350364,0,0,0.170733605754134,0,0.209613162627982,0.183843508450014,0,0.206035057238894,0.320919209591815,0,0,0.377252682772152,0.280924522409647,0.320125762024346,0.459483751644906,0,0.695305955669133,0.77163688185482,0.412085900803307,0.294397840268795,0.685738504770831,0,0,0,0.376437521661322,0.338458431566706,0.182927972872773,0,0.543216455383447,0,0.237270036248348,0.394017929502254,0.818462086339379,0.464810523557898,0,0.749431733813838,0.233931608445408,0.429742108096597,0.191288332068843,0.220591419119515,0
|short_description=p2@Spryd3
}}

Revision as of 00:31, 5 August 2015

Short description:p2@Spryd3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Spryd3_5end
Coexpression cluster:NA
Association with transcript: 3bp_to_ENSMUST00000154032_5end
EntrezGene:223918
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Spryd3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.84
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.61
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.92
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.97
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.09
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.69
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.28
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.91
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.82
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D90.61
Mouse Schwann, donor2.CNhs12573.11746-123F90.76
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I21.26
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A41.35
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F10.50
cortex, adult.CNhs10473.12-14D52.09
cortex, neonate N30.CNhs11107.1392-42F21.53
diencephalon, adult.CNhs10482.20-12F21.87
diencephalon, neonate N30.CNhs11201.1388-42B21.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.65
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C23.37
medulla oblongata, neonate N30.CNhs11200.1396-42A31.88
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.06
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G31.27
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C92.97
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.36
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.89
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.41e-0823
neuroblast (sensu Vertebrata)4.41e-0823
neuron of the substantia nigra3.10e-073
raphe nuclei neuron8.11e-073

Uber anatomy
Ontology termp-valuen
central nervous system9.56e-2473
nervous system6.94e-2375
regional part of nervous system8.44e-1954
ectoderm-derived structure1.78e-1795
ectoderm1.78e-1795
presumptive ectoderm1.78e-1795
brain7.78e-1747
future brain7.78e-1747
neural tube2.44e-1652
neural rod2.44e-1652
future spinal cord2.44e-1652
neural keel2.44e-1652
regional part of brain1.61e-1546
anterior neural tube2.91e-1340
regional part of forebrain3.50e-1239
forebrain3.50e-1239
future forebrain3.50e-1239
neurectoderm4.10e-1264
neural plate4.10e-1264
presumptive neural plate4.10e-1264
brain grey matter1.91e-1029
regional part of telencephalon1.91e-1029
telencephalon1.91e-1029
pre-chordal neural plate5.96e-1049
gray matter6.44e-1034
ecto-epithelium7.08e-1073
regional part of midbrain1.08e-084
midbrain1.08e-084
presumptive midbrain1.08e-084
midbrain neural tube1.08e-084
occipital lobe1.53e-0810
visual cortex1.53e-0810
neocortex1.53e-0810
structure with developmental contribution from neural crest1.91e-0792
substantia nigra3.10e-073
telencephalic nucleus3.10e-073
midbrain nucleus3.10e-073
neural nucleus3.10e-073
nucleus of brain3.10e-073
raphe nuclei8.11e-073
reticular formation8.11e-073
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