FFCP PHASE1:Mm9::chr12:47821823..47821831,-: Difference between revisions
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|id=chr12:47821823..47821831,-
|short_description=p@chr12:47821823..47821831,-
|description=CAGE_peak_at_chr12:47821823..47821831,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=224 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:47821823..47821831,- | |||
|description=CAGE_peak_at_chr12:47821823..47821831,- | |||
|id=chr12:47821823..47821831,- | |||
|ontology_enrichment_celltype=CL:0000117!2.62e-18!23;CL:0000337!2.62e-18!23;CL:0000540!6.37e-12!33;CL:0000047!6.37e-12!33;CL:0000031!6.37e-12!33;CL:0000404!6.37e-12!33;CL:0002319!2.65e-10!43;CL:0000221!6.74e-10!44;CL:0000133!6.74e-10!44;CL:0000393!6.95e-10!39;CL:0000211!6.95e-10!39;CL:0000055!1.56e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.01e-18,23;CL:0000337,1.01e-18,23;CL:0002611,1.59e-18,2;CL:0000540,5.54e-13,33;CL:0000047,5.54e-13,33;CL:0000031,5.54e-13,33;CL:0000404,5.54e-13,33;CL:0002612,6.33e-13,3;CL:0000120,8.30e-13,3;CL:0000393,6.06e-11,39;CL:0000211,6.06e-11,39;CL:0002319,6.75e-10,43;CL:0000221,1.15e-09,44;CL:0000133,1.15e-09,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.24e-19!75;UBERON:0001016!2.24e-19!75;UBERON:0001017!2.38e-19!73;UBERON:0005743!2.38e-19!73;UBERON:0001049!4.06e-19!52;UBERON:0005068!4.06e-19!52;UBERON:0006241!4.06e-19!52;UBERON:0007135!4.06e-19!52;UBERON:0004121!1.53e-17!102;UBERON:0000924!1.53e-17!102;UBERON:0006601!1.53e-17!102;UBERON:0002020!2.72e-17!34;UBERON:0002346!7.56e-17!71;UBERON:0003075!7.56e-17!71;UBERON:0007284!7.56e-17!71;UBERON:0000033!5.38e-16!63;UBERON:0000955!2.73e-15!50;UBERON:0006238!2.73e-15!50;UBERON:0003056!1.10e-14!49;UBERON:0002616!2.07e-14!49;UBERON:0003080!3.15e-12!40;UBERON:0002791!5.25e-12!29;UBERON:0003528!5.25e-12!29;UBERON:0001893!5.25e-12!29;UBERON:0002780!1.06e-11!39;UBERON:0001890!1.06e-11!39;UBERON:0006240!1.06e-11!39;UBERON:0007811!1.03e-08!86;UBERON:0002240!1.37e-08!6;UBERON:0005174!1.37e-08!6;UBERON:0001137!1.37e-08!6;UBERON:0003076!4.17e-08!12;UBERON:0003057!4.17e-08!12;UBERON:0000153!1.04e-07!94;UBERON:0001948!1.34e-07!5;UBERON:0002315!1.34e-07!5;UBERON:0002420!3.34e-07!8;UBERON:0007245!3.34e-07!8;UBERON:0010009!3.34e-07!8;UBERON:0010011!3.34e-07!8;UBERON:0000454!3.34e-07!8;UBERON:0000956!8.76e-07!21;UBERON:0001869!8.76e-07!21;UBERON:0000203!8.76e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001948,1.14e-28,5;UBERON:0002315,1.14e-28,5;UBERON:0002240,5.59e-24,6;UBERON:0005174,5.59e-24,6;UBERON:0001137,5.59e-24,6;UBERON:0002256,1.59e-18,2;UBERON:0002020,3.89e-16,34;UBERON:0002257,6.33e-13,3;UBERON:0003076,3.36e-12,12;UBERON:0003057,3.36e-12,12;UBERON:0001017,1.42e-11,73;UBERON:0001016,2.99e-11,75;UBERON:0001049,2.02e-10,52;UBERON:0005068,2.02e-10,52;UBERON:0006241,2.02e-10,52;UBERON:0007135,2.02e-10,52;UBERON:0000073,5.11e-10,54;UBERON:0004121,9.21e-09,95;UBERON:0000924,9.21e-09,95;UBERON:0006601,9.21e-09,95;UBERON:0002346,2.22e-08,64;UBERON:0003075,2.22e-08,64;UBERON:0007284,2.22e-08,64;UBERON:0002021,2.65e-08,10;UBERON:0000411,2.65e-08,10;UBERON:0001950,2.65e-08,10;UBERON:0010371,2.77e-07,73;UBERON:0000489,4.24e-07,21 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0.782391344348039,0,0,0,0.139986421625363,0,0,0,0,0,0,0,1.21389876515759,3.70293685490423,0.633831403506179,0,0,0,0,0,0,0,0,0.270011876663381,0.210324961351382,1.42825492201902,1.54607978666129,0.122490799214954,0.287536413054709,0,0,0.255374676170375,0.768032666281217,0.263772575460388,3.47653045689157,0.52091337055676,0.558365998002762,0.56276261003168,0.61119299110724,2.06240009831567,1.99320353118744,0.931997229126503,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0.878342391034642,0,0,0,0,0,0.149790639404823,0,0.251308704225729,0.173824320192276,0.511430914660661,0.20778804455956,0.324482526135515,0.101839363850316,0,0,0,0,0,0.360124259610698,0.150704817835715,0.272145996605311,0.12811372028485,0.187403449119458,0.258703370739016,0,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0.232236671860439,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.407302655690628,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0.491764273019036,0,0,0.35163505977661,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0.356737635204141,0,0,0,0,0,0,0,0,0,0.164140899745061,0,0.556275906031529,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0.214368379079066,0,1.12950368523413,0.920650473014354,0,0.343706364687375,0.685082519770642,0.755393897389701,1.35004500046361,0,0,1.03552062350364,0,0,0.170733605754134,0.243106717068294,0.209613162627982,0.183843508450014,0,0,0,0,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0,0.192909220463705,0,0.294397840268795,0,0.177475806159338,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0,0,0,0.197008964751127,0,0.154936841185966,0,0,0,0,0.191288332068843,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0.782391344348039,0,0,0,0.139986421625363,0,0,0,0,0,0,0,1.21389876515759,3.70293685490423,0.633831403506179,0,0,0,0,0,0,0,0,0.270011876663381,0.210324961351382,1.42825492201902,1.54607978666129,0.122490799214954,0.287536413054709,0,0,0.255374676170375,0.768032666281217,0.263772575460388,3.47653045689157,0.52091337055676,0.558365998002762,0.56276261003168,0.61119299110724,2.06240009831567,1.99320353118744,0.931997229126503,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0.878342391034642,0,0,0,0,0,0.149790639404823,0,0.251308704225729,0.173824320192276,0.511430914660661,0.20778804455956,0.324482526135515,0.101839363850316,0,0,0,0,0,0.360124259610698,0.150704817835715,0.272145996605311,0.12811372028485,0.187403449119458,0.258703370739016,0,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0.232236671860439,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.407302655690628,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0.491764273019036,0,0,0.35163505977661,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0.356737635204141,0,0,0,0,0,0,0,0,0,0.164140899745061,0,0.556275906031529,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0.214368379079066,0,1.12950368523413,0.920650473014354,0,0.343706364687375,0.685082519770642,0.755393897389701,1.35004500046361,0,0,1.03552062350364,0,0,0.170733605754134,0.243106717068294,0.209613162627982,0.183843508450014,0,0,0,0,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0,0.192909220463705,0,0.294397840268795,0,0.177475806159338,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0,0,0,0.197008964751127,0,0.154936841185966,0,0,0,0,0.191288332068843,0,0 | ||
|short_description=p@chr12:47821823..47821831,- | |||
}} | }} |
Latest revision as of 01:42, 5 August 2015
Short description: | p@chr12:47821823..47821831, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:47821823..47821831, - |
Coexpression cluster: | MCL_coexpression_mm9:224 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.01e-18 | 23 |
neuroblast (sensu Vertebrata) | 1.01e-18 | 23 |
neuron of the dorsal spinal cord | 1.59e-18 | 2 |
neuron | 5.54e-13 | 33 |
neuronal stem cell | 5.54e-13 | 33 |
neuroblast | 5.54e-13 | 33 |
electrically signaling cell | 5.54e-13 | 33 |
neuron of the ventral spinal cord | 6.33e-13 | 3 |
granule cell | 8.30e-13 | 3 |
electrically responsive cell | 6.06e-11 | 39 |
electrically active cell | 6.06e-11 | 39 |
neural cell | 6.75e-10 | 43 |
ectodermal cell | 1.15e-09 | 44 |
neurectodermal cell | 1.15e-09 | 44 |
Ontology term | p-value | n |
---|---|---|
regional part of spinal cord | 1.14e-28 | 5 |
gray matter of spinal cord | 1.14e-28 | 5 |
spinal cord | 5.59e-24 | 6 |
dorsal region element | 5.59e-24 | 6 |
dorsum | 5.59e-24 | 6 |
dorsal horn of spinal cord | 1.59e-18 | 2 |
gray matter | 3.89e-16 | 34 |
ventral horn of spinal cord | 6.33e-13 | 3 |
posterior neural tube | 3.36e-12 | 12 |
chordal neural plate | 3.36e-12 | 12 |
central nervous system | 1.42e-11 | 73 |
nervous system | 2.99e-11 | 75 |
neural tube | 2.02e-10 | 52 |
neural rod | 2.02e-10 | 52 |
future spinal cord | 2.02e-10 | 52 |
neural keel | 2.02e-10 | 52 |
regional part of nervous system | 5.11e-10 | 54 |
ectoderm-derived structure | 9.21e-09 | 95 |
ectoderm | 9.21e-09 | 95 |
presumptive ectoderm | 9.21e-09 | 95 |
neurectoderm | 2.22e-08 | 64 |
neural plate | 2.22e-08 | 64 |
presumptive neural plate | 2.22e-08 | 64 |
occipital lobe | 2.65e-08 | 10 |
visual cortex | 2.65e-08 | 10 |
neocortex | 2.65e-08 | 10 |
ecto-epithelium | 2.77e-07 | 73 |
cavitated compound organ | 4.24e-07 | 21 |