FFCP PHASE1:Mm9::chr9:44411777..44411802,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=280 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:44411777..44411802,+ | |||
|description=CAGE_peak_at_chr9:44411777..44411802,+ | |description=CAGE_peak_at_chr9:44411777..44411802,+ | ||
|id=chr9:44411777..44411802,+ | |id=chr9:44411777..44411802,+ | ||
|ontology_enrichment_celltype=CL:0000988!1.20e-08!32;CL:0002032!1.20e-08!32;CL:0000037!1.20e-08!32;CL:0000566!1.20e-08!32;CL:0000837!1.20e-08!32 | |ontology_enrichment_celltype=CL:0000988!1.20e-08!32;CL:0002032!1.20e-08!32;CL:0000037!1.20e-08!32;CL:0000566!1.20e-08!32;CL:0000837!1.20e-08!32 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,7.24e-15,32;CL:0002032,7.24e-15,32;CL:0000037,7.24e-15,32;CL:0000837,7.24e-15,32;CL:0000034,1.25e-11,97;CL:0002320,6.56e-11,46;CL:0000134,6.56e-11,46;CL:0002031,1.37e-10,25;CL:0000049,6.60e-09,19;CL:0000723,7.90e-09,91;CL:0000048,7.90e-09,91;CL:0000838,4.96e-08,12;CL:0000219,8.21e-08,54;CL:0000542,3.87e-07,13;CL:0000051,3.87e-07,13;CL:0000084,4.41e-07,11;CL:0000827,4.41e-07,11 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.43e-11,45;UBERON:0003061,5.43e-11,45;UBERON:0002384,6.56e-11,46;UBERON:0002370,9.05e-10,23;UBERON:0000974,9.05e-10,23;UBERON:0004807,9.05e-10,23;UBERON:0005058,9.05e-10,23;UBERON:0003351,9.05e-10,23;UBERON:0009113,9.05e-10,23;UBERON:0003295,9.05e-10,23;UBERON:0009722,9.05e-10,23;UBERON:0005562,9.05e-10,23;UBERON:0007690,9.05e-10,23;UBERON:0002193,1.15e-09,48;UBERON:0002405,1.15e-09,48;UBERON:0006562,4.26e-09,24;UBERON:0003408,4.26e-09,24;UBERON:0001557,4.26e-09,24;UBERON:0001042,4.26e-09,24;UBERON:0008814,4.26e-09,24;UBERON:0009145,4.26e-09,24;UBERON:0000077,4.81e-09,35;UBERON:0004177,6.52e-09,29;UBERON:0005057,6.52e-09,29;UBERON:0000072,2.09e-07,27;UBERON:0003081,4.95e-07,87 | |||
|phase1_expression=0.640595388419176,1.39590163055744,0,0.60492842261366,0,1.51091344720701,1.40167584357315,16.9151553708465,5.490760163915,3.97909694747389,0,0.159544317990673,7.53283211697305,4.80812213304486,1.66554880907831,1.61980213911861,0,7.72882305127682,5.07323404341233,6.79023442876848,0.425216450755349,4.26951090163807,4.4403964153619,0.799962113967033,0.45881856213434,1.14846392823004,0,1.07735616342945,0.380046838912748,0.252030129759931,0.665191531965914,2.54012269383853,1.84519436275371,15.8481681015439,1.44425809875637,0.997407872150954,1.83752420636132,3.76678467663217,1.5626706890476,4.71171369576418,8.2352408324342,0.683045484958446,1.45653105909346,3.02152363141385,2.93993100536592,4.03802854755699,0.782391344348039,0.218025156380447,0.878744730937887,0.972149495371417,0.839918529752175,0,22.3150866056789,29.0144856804538,22.1821907434026,0.257259436035947,0.286533439938757,0.515672092277442,0.202316460859598,0,0,1.69422266034566,1.77858959222228,0,0.988866362566974,0,0,0,0.207379224616955,0,0.210324961351382,0.285650984403804,0.441737081903227,0.122490799214954,0.383381884072945,0,0,0.510749352340751,0.46081959976873,0.527545150920775,0,0,0.279182999001381,0.56276261003168,0.15279824777681,0.294628585473668,0.569486723196412,0.186399445825301,0.075726193333184,0.604572480854284,3.18850937571846,1.72084775396277,0.679971333707751,0.539703191637817,0,0,1.26399978118577,0.170430322578058,0.259786004602869,0.35333957451034,0.985903938436763,0,0,0,0.865964164044856,0.253359865475099,0.505524445014783,0.45673551887624,0.517875767294343,0.593768556259299,0.693941307064543,1.21786191324856,0.922461989024234,0.301445281105245,1.88141931417128,0.753999547978053,1.73036477414062,0.289198713839823,0,0.161766849947409,0.662524555381181,0,3.72783522436244,0.292780797011547,0.41889341362691,0.510914110417183,6.82946209683746,5.39912457894067,9.65733725755292,0.149790639404823,0,0.251308704225729,0,0,0,0.324482526135515,0.916554274652847,0.746441823660558,5.05445516867349,0,1.04096354370163,0.919608417733892,0.540186389416048,0.753524089178575,0.340182495756639,0.512454881139399,0.562210347358373,0,2.37124792226126,2.45837904218165,1.05570674498369,1.09597866213787,0,0.348252166522167,0.61734640922383,0.995171334092466,8.42655824775882,10.2939162845886,6.81992398549422,0.621377317606506,1.17263029990548,0.720248245844059,0,0.196764231747404,0.154267112887378,0,0.536546802799238,0.700592054203017,0.16455984991348,0.656669856316381,0.891756905004413,0.438599962275997,0,0,0,0.205809224758569,0,1.05780226665418,0.853153002140936,1.39342003116263,0.77320476793256,0.201683524623343,0,0.190225626112559,0,0.494096864172033,0.754005626400808,0.596869416123452,0.19496408711912,0,0,0.199141273254367,0.948339504765408,0.799739588268102,1.1270773567308,0.814605311381257,0.775809948670503,0.280543279561274,0.569128834118316,0.885660887877613,0.470996183524124,0.246794327843601,0.592905254174298,0.667380422864376,0.982794975566015,0.674586337154561,0.608580364165509,0.241177159752417,0.763877555344259,0.287696137450811,0,0.274561413188081,0,0.372140947668503,0.624075346229121,0.505157755894224,0.896987067609561,0,0.923765950833023,1.89491411770485,1.95557971730431,1.69745085775188,0.234690248288502,1.00503754465089,0.476087281772027,0.585400943573396,0.630540576424764,0.44292937929755,0,1.14704320301017,0.690739927463582,0.144649058581512,0,2.17562273527484,0.983528546038072,0.275936746304732,0.160550589987792,0.117211686592203,0.163934945376675,0.504941854408746,1.57754109708128,2.34263246577983,1.29254038639679,1.67278158566786,1.78238939265915,1.13230612315533,2.02405350837447,3.21481443702443,1.58115111178609,0.321321316421807,0.99358059645788,0.534196811001766,0.488660878060728,2.14461159864296,0,1.45668381692989,0.906970670894253,2.26326095707078,2.36241514304618,0.307435147943927,0.516856586336442,1.81766864738753,0,0.948110273807448,3.16255825724996,1.03135543248187,0.680879211507576,0.900305470156551,1.68166288917581,0.857348140126369,1.06404140185364,0.535106452806212,0,1.522324745573,0.704015124191131,1.48282449604674,9.48272111636336,0.32977250588296,0.322928853391811,0.784068024066026,0.716234064018819,0.328281799490123,0.291480836629851,0.370850604021019,1.70870880797853,0.412773735926445,0.370389054739423,1.13021074202815,0.410082683163076,1.37266903923914,11.728511669576,14.2750481370131,14.7873971970733,0,0.632671987162271,0.813277868507395,0.648032044930808,1.25452977608681,0.436725127492355,1.07891477107857,1.57041565878138,1.04702376793612,0.259229946583586,0,0,0.747582730219894,0.66183396182839,0.194451188344048,0.387479470433193,0.168956125490778,0.352071715937262,0.651021924219751,1.15345278868282,0,0.288030006257865,5.05617793005085,3.64905387522296,2.77319584345034,2.07873316764472,3.93858730468459,4.76835251475036,3.00488623799922,3.98761723371358,4.13962444787405,2.97206545954499,2.82313318383153,2.82627854145282,2.11666051608725,4.55819918508119,0.680191150845634,1.10992976687032,1.52513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| |phase1_expression=0.640595388419176,1.39590163055744,0,0.60492842261366,0,1.51091344720701,1.40167584357315,16.9151553708465,5.490760163915,3.97909694747389,0,0.159544317990673,7.53283211697305,4.80812213304486,1.66554880907831,1.61980213911861,0,7.72882305127682,5.07323404341233,6.79023442876848,0.425216450755349,4.26951090163807,4.4403964153619,0.799962113967033,0.45881856213434,1.14846392823004,0,1.07735616342945,0.380046838912748,0.252030129759931,0.665191531965914,2.54012269383853,1.84519436275371,15.8481681015439,1.44425809875637,0.997407872150954,1.83752420636132,3.76678467663217,1.5626706890476,4.71171369576418,8.2352408324342,0.683045484958446,1.45653105909346,3.02152363141385,2.93993100536592,4.03802854755699,0.782391344348039,0.218025156380447,0.878744730937887,0.972149495371417,0.839918529752175,0,22.3150866056789,29.0144856804538,22.1821907434026,0.257259436035947,0.286533439938757,0.515672092277442,0.202316460859598,0,0,1.69422266034566,1.77858959222228,0,0.988866362566974,0,0,0,0.207379224616955,0,0.210324961351382,0.285650984403804,0.441737081903227,0.122490799214954,0.383381884072945,0,0,0.510749352340751,0.46081959976873,0.527545150920775,0,0,0.279182999001381,0.56276261003168,0.15279824777681,0.294628585473668,0.569486723196412,0.186399445825301,0.075726193333184,0.604572480854284,3.18850937571846,1.72084775396277,0.679971333707751,0.539703191637817,0,0,1.26399978118577,0.170430322578058,0.259786004602869,0.35333957451034,0.985903938436763,0,0,0,0.865964164044856,0.253359865475099,0.505524445014783,0.45673551887624,0.517875767294343,0.593768556259299,0.693941307064543,1.21786191324856,0.922461989024234,0.301445281105245,1.88141931417128,0.753999547978053,1.73036477414062,0.289198713839823,0,0.161766849947409,0.662524555381181,0,3.72783522436244,0.292780797011547,0.41889341362691,0.510914110417183,6.82946209683746,5.39912457894067,9.65733725755292,0.149790639404823,0,0.251308704225729,0,0,0,0.324482526135515,0.916554274652847,0.746441823660558,5.05445516867349,0,1.04096354370163,0.919608417733892,0.540186389416048,0.753524089178575,0.340182495756639,0.512454881139399,0.562210347358373,0,2.37124792226126,2.45837904218165,1.05570674498369,1.09597866213787,0,0.348252166522167,0.61734640922383,0.995171334092466,8.42655824775882,10.2939162845886,6.81992398549422,0.621377317606506,1.17263029990548,0.720248245844059,0,0.196764231747404,0.154267112887378,0,0.536546802799238,0.700592054203017,0.16455984991348,0.656669856316381,0.891756905004413,0.438599962275997,0,0,0,0.205809224758569,0,1.05780226665418,0.853153002140936,1.39342003116263,0.77320476793256,0.201683524623343,0,0.190225626112559,0,0.494096864172033,0.754005626400808,0.596869416123452,0.19496408711912,0,0,0.199141273254367,0.948339504765408,0.799739588268102,1.1270773567308,0.814605311381257,0.775809948670503,0.280543279561274,0.569128834118316,0.885660887877613,0.470996183524124,0.246794327843601,0.592905254174298,0.667380422864376,0.982794975566015,0.674586337154561,0.608580364165509,0.241177159752417,0.763877555344259,0.287696137450811,0,0.274561413188081,0,0.372140947668503,0.624075346229121,0.505157755894224,0.896987067609561,0,0.923765950833023,1.89491411770485,1.95557971730431,1.69745085775188,0.234690248288502,1.00503754465089,0.476087281772027,0.585400943573396,0.630540576424764,0.44292937929755,0,1.14704320301017,0.690739927463582,0.144649058581512,0,2.17562273527484,0.983528546038072,0.275936746304732,0.160550589987792,0.117211686592203,0.163934945376675,0.504941854408746,1.57754109708128,2.34263246577983,1.29254038639679,1.67278158566786,1.78238939265915,1.13230612315533,2.02405350837447,3.21481443702443,1.58115111178609,0.321321316421807,0.99358059645788,0.534196811001766,0.488660878060728,2.14461159864296,0,1.45668381692989,0.906970670894253,2.26326095707078,2.36241514304618,0.307435147943927,0.516856586336442,1.81766864738753,0,0.948110273807448,3.16255825724996,1.03135543248187,0.680879211507576,0.900305470156551,1.68166288917581,0.857348140126369,1.06404140185364,0.535106452806212,0,1.522324745573,0.704015124191131,1.48282449604674,9.48272111636336,0.32977250588296,0.322928853391811,0.784068024066026,0.716234064018819,0.328281799490123,0.291480836629851,0.370850604021019,1.70870880797853,0.412773735926445,0.370389054739423,1.13021074202815,0.410082683163076,1.37266903923914,11.728511669576,14.2750481370131,14.7873971970733,0,0.632671987162271,0.813277868507395,0.648032044930808,1.25452977608681,0.436725127492355,1.07891477107857,1.57041565878138,1.04702376793612,0.259229946583586,0,0,0.747582730219894,0.66183396182839,0.194451188344048,0.387479470433193,0.168956125490778,0.352071715937262,0.651021924219751,1.15345278868282,0,0.288030006257865,5.05617793005085,3.64905387522296,2.77319584345034,2.07873316764472,3.93858730468459,4.76835251475036,3.00488623799922,3.98761723371358,4.13962444787405,2.97206545954499,2.82313318383153,2.82627854145282,2.11666051608725,4.55819918508119,0.680191150845634,1.10992976687032,1.52513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| ||
|short_description=p@chr9:44411777..44411802,+ | |short_description=p@chr9:44411777..44411802,+ | ||
}} | }} |
Latest revision as of 04:12, 5 August 2015
Short description: | p@chr9:44411777..44411802, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:44411777..44411802, + |
Coexpression cluster: | MCL_coexpression_mm9:280 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 7.24e-15 | 32 |
hematopoietic oligopotent progenitor cell | 7.24e-15 | 32 |
hematopoietic stem cell | 7.24e-15 | 32 |
hematopoietic multipotent progenitor cell | 7.24e-15 | 32 |
stem cell | 1.25e-11 | 97 |
connective tissue cell | 6.56e-11 | 46 |
mesenchymal cell | 6.56e-11 | 46 |
hematopoietic lineage restricted progenitor cell | 1.37e-10 | 25 |
common myeloid progenitor | 6.60e-09 | 19 |
somatic stem cell | 7.90e-09 | 91 |
multi fate stem cell | 7.90e-09 | 91 |
lymphoid lineage restricted progenitor cell | 4.96e-08 | 12 |
motile cell | 8.21e-08 | 54 |
lymphocyte | 3.87e-07 | 13 |
common lymphoid progenitor | 3.87e-07 | 13 |
T cell | 4.41e-07 | 11 |
pro-T cell | 4.41e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.43e-11 | 45 |
blood island | 5.43e-11 | 45 |
connective tissue | 6.56e-11 | 46 |
thymus | 9.05e-10 | 23 |
neck | 9.05e-10 | 23 |
respiratory system epithelium | 9.05e-10 | 23 |
hemolymphoid system gland | 9.05e-10 | 23 |
pharyngeal epithelium | 9.05e-10 | 23 |
thymic region | 9.05e-10 | 23 |
pharyngeal gland | 9.05e-10 | 23 |
entire pharyngeal arch endoderm | 9.05e-10 | 23 |
thymus primordium | 9.05e-10 | 23 |
early pharyngeal endoderm | 9.05e-10 | 23 |
hemolymphoid system | 1.15e-09 | 48 |
immune system | 1.15e-09 | 48 |
pharynx | 4.26e-09 | 24 |
gland of gut | 4.26e-09 | 24 |
upper respiratory tract | 4.26e-09 | 24 |
chordate pharynx | 4.26e-09 | 24 |
pharyngeal arch system | 4.26e-09 | 24 |
pharyngeal region of foregut | 4.26e-09 | 24 |
mixed endoderm/mesoderm-derived structure | 4.81e-09 | 35 |
hemopoietic organ | 6.52e-09 | 29 |
immune organ | 6.52e-09 | 29 |
segment of respiratory tract | 2.09e-07 | 27 |
lateral plate mesoderm | 4.95e-07 | 87 |