FFCP PHASE1:Mm9::chr6:129187801..129187848,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr6:129187801..129187848,- to FFCP PHASE1:Mm9::chr6:129187801..129187848,-: NSchange) |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=44 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=117bp_to_ENSMUST00000139659_5end | |||
|cluster_id=chr6:129187801..129187848,- | |||
|description=CAGE_peak_1_at_ENSMUST00000139659_5end | |||
|id=chr6:129187801..129187848,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,1.02e-07,11;CL:0000827,1.02e-07,11;CL:0000791,6.74e-07,9;CL:0000789,6.74e-07,9;CL:0002420,6.74e-07,9;CL:0002419,6.74e-07,9;CL:0000790,6.74e-07,9;CL:0000838,9.03e-07,12 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!4.00e-22!128;UBERON:0001555!4.00e-22!128;UBERON:0007026!4.00e-22!128;UBERON:0004119!1.70e-21!130;UBERON:0000925!1.70e-21!130;UBERON:0006595!1.70e-21!130;UBERON:0004921!3.83e-21!126;UBERON:0004185!3.83e-21!126;UBERON:0003929!1.20e-11!55;UBERON:0000490!4.09e-11!66;UBERON:0005911!4.89e-11!69;UBERON:0000077!6.49e-11!97;UBERON:0003104!9.01e-11!131;UBERON:0009142!9.01e-11!131;UBERON:0001041!1.53e-10!92;UBERON:0004177!3.17e-10!29;UBERON:0005409!3.87e-10!59;UBERON:0005057!4.28e-10!51;UBERON:0003408!7.63e-10!24;UBERON:0002405!8.58e-10!70;UBERON:0006562!1.08e-09!24;UBERON:0001557!1.08e-09!24;UBERON:0001042!1.08e-09!24;UBERON:0008814!1.08e-09!24;UBERON:0009145!1.08e-09!24;UBERON:0002370!2.63e-09!23;UBERON:0000974!2.63e-09!23;UBERON:0004807!2.63e-09!23;UBERON:0005058!2.63e-09!23;UBERON:0003351!2.63e-09!23;UBERON:0009113!2.63e-09!23;UBERON:0003295!2.63e-09!23;UBERON:0009722!2.63e-09!23;UBERON:0005562!2.63e-09!23;UBERON:0007690!2.63e-09!23;UBERON:0002193!6.88e-09!48;UBERON:0000160!3.86e-08!43;UBERON:0000072!5.54e-08!27;UBERON:0002390!1.10e-07!45;UBERON:0003061!1.10e-07!45;UBERON:0001004!2.10e-07!42;UBERON:0000065!5.75e-07!41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,2.12e-24,116;UBERON:0001555,2.12e-24,116;UBERON:0007026,2.12e-24,116;UBERON:0004119,1.68e-23,118;UBERON:0000925,1.68e-23,118;UBERON:0006595,1.68e-23,118;UBERON:0004921,3.51e-23,114;UBERON:0003408,2.36e-14,24;UBERON:0006562,3.92e-14,24;UBERON:0001557,3.92e-14,24;UBERON:0001042,3.92e-14,24;UBERON:0008814,3.92e-14,24;UBERON:0009145,3.92e-14,24;UBERON:0004177,5.91e-14,29;UBERON:0005057,5.91e-14,29;UBERON:0003929,1.05e-13,55;UBERON:0002370,1.31e-13,23;UBERON:0000974,1.31e-13,23;UBERON:0004807,1.31e-13,23;UBERON:0005058,1.31e-13,23;UBERON:0003351,1.31e-13,23;UBERON:0009113,1.31e-13,23;UBERON:0003295,1.31e-13,23;UBERON:0009722,1.31e-13,23;UBERON:0005562,1.31e-13,23;UBERON:0007690,1.31e-13,23;UBERON:0000077,3.26e-13,35;UBERON:0000490,1.04e-12,66;UBERON:0005409,3.32e-12,47;UBERON:0005911,5.52e-12,69;UBERON:0000160,6.39e-12,31;UBERON:0000072,1.43e-11,27;UBERON:0001041,2.34e-10,80;UBERON:0002193,2.60e-10,48;UBERON:0002405,2.60e-10,48;UBERON:0001004,2.40e-09,42;UBERON:0000065,9.27e-09,41;UBERON:0002390,9.36e-09,45;UBERON:0003061,9.36e-09,45;UBERON:0007811,1.53e-08,36;UBERON:0002530,7.24e-08,65;UBERON:0000344,9.83e-07,15 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0.454999239389536,1.51232105653415,3.50627010962443,1.84667199103079,2.80335168714631,22.4674582788343,4.646027831005,4.68129052643987,1.54096171402954,1.7549874978974,6.16322627752341,5.68232615723483,0.666219523631325,0.404950534779652,0.699561878128147,2.83915948822414,3.29074640653773,3.81950686618227,1.10556277196391,1.48936426801328,3.6567970479451,2.07990149631429,3.67054849707472,2.29692785646008,1.29228598847722,0.861884930743556,2.85035129184561,3.02436155711917,3.54768817048488,0,0.61506478758457,0,3.46621943701529,2.49351968037739,3.87921776898501,2.92972141515835,1.5626706890476,2.61761871986899,0.588231488031014,2.04913645487534,5.34061388334269,1.1330713617802,0.912392380975631,1.28482726513177,0.782391344348039,0.218025156380447,0,0.388859798148567,0.419959264876088,0,0.671130424230945,2.90144856804538,2.68875039313971,0,0.573066879877513,0,0,0,0,0,0,0.899899717281399,0,0,0.299600110518405,0.384218305321555,0,0,0,0,0.220868540951614,0,0,0,0,0,0.307213066512487,0,0,0,0,0,0,0,0,0,0.227178579999552,0,1.44932244350839,1.72084775396277,0,0.539703191637817,1.29955283489534,2.68816132258401,1.82577746171277,0.511290967734173,0.259786004602869,0,0.422530259330042,0,0,0,0.216491041011214,0,0.505524445014783,2.74041311325744,6.21450920753212,0.29688427812965,0,0,0.230615497256059,0,0,0,0.741584903203122,0.86759614151947,0.884610551949874,1.29413479957927,1.10420759230197,0.969750506270444,1.86391761218122,0.292780797011547,0.209446706813455,5.36459815938042,0.599075622529601,1.19980546198682,1.14363204365758,0.149790639404823,0,0,0,0,0.20778804455956,0,0.407357455401265,1.61729061793121,2.27450482590307,2.73574412652416,0,0.229902104433473,0,0,0.272145996605311,0.12811372028485,0,0.517406741478031,0,0,0,0,0,0.348252166522167,1.23469281844766,0.199034266818493,0.702213187313235,0.257347907114715,0.284163499395593,0,0,0.180062061461015,0.23674473558521,0.393528463494808,0,0.232533944750408,0,0.350296027101508,0,0.492502392237286,0.405344047729279,0.438599962275997,0.878200461164203,0.671032093801859,0,0.102904612379284,6.27795687669216,5.28901133327089,0,0,1.15980715189884,2.01683524623343,1.11189021922435,1.71203063501303,1.89811624617805,2.63518327558417,3.2673577144035,2.38747766449381,1.9496408711912,4.49409704327111,4.75503709724327,4.58024928485045,0.189667900953082,1.02823661348756,1.1270773567308,0.203651327845314,0.581857461502877,0.350679099451593,0.569128834118316,0.885660887877613,2.04098346193787,1.48076596706161,1.48226313543574,1.00107063429656,0.393117990226406,0.899448449539415,0.202860121388503,0.482354319504834,0.50925170356284,1.15078454980324,0.648540907100142,0.823684239564244,2.87536413054709,1.48856379067401,1.87222603868736,1.51547326768267,1.61457672169721,0,2.03228509183265,0,0.162964976442026,0.678980343100753,0,1.00503754465089,0.476087281772027,0.975668239288994,1.10344600874334,0.664394068946325,0.318909537314974,3.11340297959902,1.03610989119537,2.4590339958857,0,1.08781136763742,5.90117127622843,4.41498794087572,0.160550589987792,0.117211686592203,0,1.26235463602186,0,0,0,0,0,0,0,0.292255857911312,0,0,0.851640511249612,0.178065603667255,0.325773918707152,1.81467135269789,2.65490276679926,0.242780636154981,0.302323556964751,1.13163047853539,0,1.22974059177571,1.55056975900933,1.81766864738753,0,0.632073515871632,1.05418608574999,1.03135543248187,0.340439605753788,0,0.258717367565509,0.214337035031592,0,0,0,0.304464949114599,0.23467170806371,0.21183207086382,33.5203165043542,4.28704257647848,0.484393280087717,0.603129249281559,0.358117032009409,0.984845398470368,3.49777003955821,0,2.56306321196779,1.03193433981611,0.925972636848558,1.13021074202815,1.6403307326523,1.60144721244566,0.849892149969277,0.979660166265606,0.276399947608848,5.72802370809068,0.158167996790568,0.406638934253697,0.648032044930808,0.627264888043406,1.52853794622324,0.404593039154462,1.07449492442937,2.87931536182433,7.77689839750757,4.97071450469541,0,0,0,0,0,0.168956125490778,0.234714477291508,0,0,0,0.576060012515731,15.4845449107807,5.27085559754427,7.39518891586756,7.01572444080093,7.87717460936918,11.1261558677508,5.64918612743854,8.86137163047463,8.4811817956444,4.87723562591999,6.45287584875779,10.4279932391535,12.6037512548832,17.7652891315985,2.72076460338254,0,0.0897138566094757,0.167884616364078,0.772758376128762,0.563047426353546,2.38097111547445,1.92931541171159,35.6116193865108,0,0,0.572895513439397,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0.243106717068294,0,0.735374033800057,0.888986911206461,1.03017528619447,0.320919209591815,0.505394423527595,0.25347929989024,0.943131706930381,0.468207537349412,0.512201219238954,0.402048282689293,0.952587382566147,0.695305955669133,0.192909220463705,0.412085900803307,0.883193520806384,1.02860775715625,0.70990322463735,0.476872379894642,0.581385666529314,0.470546902076653,0.25384382367503,0,0.526139422875686,0.679020569229309,0,0.355905054372522,0.689531376628944,1.22769312950907,0.464810523557898,0.385813221962283,0.499621155875892,0.935726433781634,0.859484216193193,0.191288332068843,1.10295709559758,1.85494268496337 | |phase1_expression=0.160148847104794,0.348975407639361,0.454999239389536,1.51232105653415,3.50627010962443,1.84667199103079,2.80335168714631,22.4674582788343,4.646027831005,4.68129052643987,1.54096171402954,1.7549874978974,6.16322627752341,5.68232615723483,0.666219523631325,0.404950534779652,0.699561878128147,2.83915948822414,3.29074640653773,3.81950686618227,1.10556277196391,1.48936426801328,3.6567970479451,2.07990149631429,3.67054849707472,2.29692785646008,1.29228598847722,0.861884930743556,2.85035129184561,3.02436155711917,3.54768817048488,0,0.61506478758457,0,3.46621943701529,2.49351968037739,3.87921776898501,2.92972141515835,1.5626706890476,2.61761871986899,0.588231488031014,2.04913645487534,5.34061388334269,1.1330713617802,0.912392380975631,1.28482726513177,0.782391344348039,0.218025156380447,0,0.388859798148567,0.419959264876088,0,0.671130424230945,2.90144856804538,2.68875039313971,0,0.573066879877513,0,0,0,0,0,0,0.899899717281399,0,0,0.299600110518405,0.384218305321555,0,0,0,0,0.220868540951614,0,0,0,0,0,0.307213066512487,0,0,0,0,0,0,0,0,0,0.227178579999552,0,1.44932244350839,1.72084775396277,0,0.539703191637817,1.29955283489534,2.68816132258401,1.82577746171277,0.511290967734173,0.259786004602869,0,0.422530259330042,0,0,0,0.216491041011214,0,0.505524445014783,2.74041311325744,6.21450920753212,0.29688427812965,0,0,0.230615497256059,0,0,0,0.741584903203122,0.86759614151947,0.884610551949874,1.29413479957927,1.10420759230197,0.969750506270444,1.86391761218122,0.292780797011547,0.209446706813455,5.36459815938042,0.599075622529601,1.19980546198682,1.14363204365758,0.149790639404823,0,0,0,0,0.20778804455956,0,0.407357455401265,1.61729061793121,2.27450482590307,2.73574412652416,0,0.229902104433473,0,0,0.272145996605311,0.12811372028485,0,0.517406741478031,0,0,0,0,0,0.348252166522167,1.23469281844766,0.199034266818493,0.702213187313235,0.257347907114715,0.284163499395593,0,0,0.180062061461015,0.23674473558521,0.393528463494808,0,0.232533944750408,0,0.350296027101508,0,0.492502392237286,0.405344047729279,0.438599962275997,0.878200461164203,0.671032093801859,0,0.102904612379284,6.27795687669216,5.28901133327089,0,0,1.15980715189884,2.01683524623343,1.11189021922435,1.71203063501303,1.89811624617805,2.63518327558417,3.2673577144035,2.38747766449381,1.9496408711912,4.49409704327111,4.75503709724327,4.58024928485045,0.189667900953082,1.02823661348756,1.1270773567308,0.203651327845314,0.581857461502877,0.350679099451593,0.569128834118316,0.885660887877613,2.04098346193787,1.48076596706161,1.48226313543574,1.00107063429656,0.393117990226406,0.899448449539415,0.202860121388503,0.482354319504834,0.50925170356284,1.15078454980324,0.648540907100142,0.823684239564244,2.87536413054709,1.48856379067401,1.87222603868736,1.51547326768267,1.61457672169721,0,2.03228509183265,0,0.162964976442026,0.678980343100753,0,1.00503754465089,0.476087281772027,0.975668239288994,1.10344600874334,0.664394068946325,0.318909537314974,3.11340297959902,1.03610989119537,2.4590339958857,0,1.08781136763742,5.90117127622843,4.41498794087572,0.160550589987792,0.117211686592203,0,1.26235463602186,0,0,0,0,0,0,0,0.292255857911312,0,0,0.851640511249612,0.178065603667255,0.325773918707152,1.81467135269789,2.65490276679926,0.242780636154981,0.302323556964751,1.13163047853539,0,1.22974059177571,1.55056975900933,1.81766864738753,0,0.632073515871632,1.05418608574999,1.03135543248187,0.340439605753788,0,0.258717367565509,0.214337035031592,0,0,0,0.304464949114599,0.23467170806371,0.21183207086382,33.5203165043542,4.28704257647848,0.484393280087717,0.603129249281559,0.358117032009409,0.984845398470368,3.49777003955821,0,2.56306321196779,1.03193433981611,0.925972636848558,1.13021074202815,1.6403307326523,1.60144721244566,0.849892149969277,0.979660166265606,0.276399947608848,5.72802370809068,0.158167996790568,0.406638934253697,0.648032044930808,0.627264888043406,1.52853794622324,0.404593039154462,1.07449492442937,2.87931536182433,7.77689839750757,4.97071450469541,0,0,0,0,0,0.168956125490778,0.234714477291508,0,0,0,0.576060012515731,15.4845449107807,5.27085559754427,7.39518891586756,7.01572444080093,7.87717460936918,11.1261558677508,5.64918612743854,8.86137163047463,8.4811817956444,4.87723562591999,6.45287584875779,10.4279932391535,12.6037512548832,17.7652891315985,2.72076460338254,0,0.0897138566094757,0.167884616364078,0.772758376128762,0.563047426353546,2.38097111547445,1.92931541171159,35.6116193865108,0,0,0.572895513439397,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0.243106717068294,0,0.735374033800057,0.888986911206461,1.03017528619447,0.320919209591815,0.505394423527595,0.25347929989024,0.943131706930381,0.468207537349412,0.512201219238954,0.402048282689293,0.952587382566147,0.695305955669133,0.192909220463705,0.412085900803307,0.883193520806384,1.02860775715625,0.70990322463735,0.476872379894642,0.581385666529314,0.470546902076653,0.25384382367503,0,0.526139422875686,0.679020569229309,0,0.355905054372522,0.689531376628944,1.22769312950907,0.464810523557898,0.385813221962283,0.499621155875892,0.935726433781634,0.859484216193193,0.191288332068843,1.10295709559758,1.85494268496337 | ||
|short_description=p1@ENSMUST00000139659 | |||
}} | }} |
Latest revision as of 06:14, 5 August 2015
Short description: | p1@ENSMUST00000139659 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000139659_5end |
Coexpression cluster: | MCL_coexpression_mm9:44 |
Association with transcript: | 117bp_to_ENSMUST00000139659_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 1.02e-07 | 11 |
pro-T cell | 1.02e-07 | 11 |
mature alpha-beta T cell | 6.74e-07 | 9 |
alpha-beta T cell | 6.74e-07 | 9 |
immature T cell | 6.74e-07 | 9 |
mature T cell | 6.74e-07 | 9 |
immature alpha-beta T cell | 6.74e-07 | 9 |
lymphoid lineage restricted progenitor cell | 9.03e-07 | 12 |