FFCP PHASE1:Mm9::chr17:71096648..71096653,+: Difference between revisions
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|id=chr17:71096648..71096653,+
|short_description=p@chr17:71096648..71096653,+
|description=CAGE_peak_at_chr17:71096648..71096653,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2116 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:71096648..71096653,+ | |||
|description=CAGE_peak_at_chr17:71096648..71096653,+ | |||
|id=chr17:71096648..71096653,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,7.07e-16,3;CL:0002202,7.07e-16,3;CL:0000069,7.07e-16,3;CL:0002632,7.07e-16,3;CL:0002368,7.07e-16,3;CL:0000307,7.07e-16,3;CL:0000377,7.07e-16,3;CL:0000223,1.66e-11,20;CL:0000066,4.78e-09,25;CL:0002076,3.41e-08,15;CL:0002250,2.04e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!4.81e-13!10;UBERON:0000411!4.81e-13!10;UBERON:0001950!4.81e-13!10;UBERON:0000033!1.39e-10!63;UBERON:0002619!2.21e-09!17;UBERON:0002346!7.50e-09!71;UBERON:0003075!7.50e-09!71;UBERON:0007284!7.50e-09!71;UBERON:0000955!1.40e-08!50;UBERON:0006238!1.40e-08!50;UBERON:0003056!2.10e-08!49;UBERON:0000956!2.57e-08!21;UBERON:0001869!2.57e-08!21;UBERON:0000203!2.57e-08!21;UBERON:0002616!7.00e-08!49;UBERON:0004121!3.46e-07!102;UBERON:0000924!3.46e-07!102;UBERON:0006601!3.46e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.54e-28,10;UBERON:0000411,2.54e-28,10;UBERON:0001950,2.54e-28,10;UBERON:0002619,1.30e-20,17;UBERON:0000956,3.09e-20,21;UBERON:0001869,3.09e-20,21;UBERON:0000203,3.09e-20,21;UBERON:0003126,7.07e-16,3;UBERON:0001005,7.07e-16,3;UBERON:0007196,7.07e-16,3;UBERON:0001558,7.07e-16,3;UBERON:0003528,2.84e-14,29;UBERON:0002791,2.84e-14,29;UBERON:0001893,2.84e-14,29;UBERON:0000955,4.11e-12,47;UBERON:0006238,4.11e-12,47;UBERON:0002020,5.74e-12,34;UBERON:0002616,2.29e-10,46;UBERON:0002780,2.99e-10,39;UBERON:0001890,2.99e-10,39;UBERON:0006240,2.99e-10,39;UBERON:0003080,5.87e-10,40;UBERON:0001049,5.58e-09,52;UBERON:0005068,5.58e-09,52;UBERON:0006241,5.58e-09,52;UBERON:0007135,5.58e-09,52;UBERON:0000073,1.38e-08,54;UBERON:0003056,7.28e-08,49;UBERON:0001017,3.88e-07,73;UBERON:0002346,5.53e-07,64;UBERON:0003075,5.53e-07,64;UBERON:0007284,5.53e-07,64;UBERON:0001016,6.74e-07,75 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88851619751275,0.166234645358492,2.85837098767317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0.227178579999552,0.151143120213571,3.18850937571846,0,5.439770669662,0,0,0,0,0,0,0,0,0,0,0,6.92771331235885,5.82727690592727,7.07734223020697,0.11418387971906,0,0.148442139064825,0,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0.878342391034642,1.8850203613211,0,0,0,0,0.449371918214468,0,0,1.04294592115366,0.511430914660661,0.20778804455956,0.324482526135515,0,0,0,0.210441855886474,0,0.229902104433473,0,0,0.340182495756639,0.2562274405697,0.0937017245597288,0.258703370739016,0,0,0.175951124163949,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,1.68231958851302,0.205809224758569,0.660837565967596,0,0,0.232236671860439,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.468846746368813,0,0,0,0,0.215423397732799,0,0,0,0.404810701674894,0,0,1.28528526568723,0,0,0.162886959353576,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0,0,0,0,0,0.304464949114599,0.23467170806371,0,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0.419854356970974,0.276399947608848,0,0,0,0.108005340821801,0,0,0.134864346384821,0,0.523511883968059,0,0,0,0.149516546043979,0,0,0.258319646955462,0.168956125490778,0,0,0,0,0.576060012515731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36630324853453,0,0,1.12950368523413,0.920650473014354,0.572895513439397,1.89038500578056,2.05524755931193,1.5107877947794,1.35004500046361,1.35096360967266,1.81256963593682,2.07104124700728,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.114870937911227,0,0.115884325944855,0,0,0,0,0,0.238436189947321,0.145346416632329,0.0941093804153306,0.25384382367503,0,0,0,0,0,0.0985044823755635,0,0.309873682371932,0,0,0,0,0,0,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88851619751275,0.166234645358492,2.85837098767317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0.227178579999552,0.151143120213571,3.18850937571846,0,5.439770669662,0,0,0,0,0,0,0,0,0,0,0,6.92771331235885,5.82727690592727,7.07734223020697,0.11418387971906,0,0.148442139064825,0,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0.878342391034642,1.8850203613211,0,0,0,0,0.449371918214468,0,0,1.04294592115366,0.511430914660661,0.20778804455956,0.324482526135515,0,0,0,0.210441855886474,0,0.229902104433473,0,0,0.340182495756639,0.2562274405697,0.0937017245597288,0.258703370739016,0,0,0.175951124163949,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,1.68231958851302,0.205809224758569,0.660837565967596,0,0,0.232236671860439,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.468846746368813,0,0,0,0,0.215423397732799,0,0,0,0.404810701674894,0,0,1.28528526568723,0,0,0.162886959353576,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0,0,0,0,0,0.304464949114599,0.23467170806371,0,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0.419854356970974,0.276399947608848,0,0,0,0.108005340821801,0,0,0.134864346384821,0,0.523511883968059,0,0,0,0.149516546043979,0,0,0.258319646955462,0.168956125490778,0,0,0,0,0.576060012515731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36630324853453,0,0,1.12950368523413,0.920650473014354,0.572895513439397,1.89038500578056,2.05524755931193,1.5107877947794,1.35004500046361,1.35096360967266,1.81256963593682,2.07104124700728,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.114870937911227,0,0.115884325944855,0,0,0,0,0,0.238436189947321,0.145346416632329,0.0941093804153306,0.25384382367503,0,0,0,0,0,0.0985044823755635,0,0.309873682371932,0,0,0,0,0,0,0 | ||
|short_description=p@chr17:71096648..71096653,+ | |||
}} | }} |
Latest revision as of 06:47, 5 August 2015
Short description: | p@chr17:71096648..71096653, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:71096648..71096653, + |
Coexpression cluster: | MCL_coexpression_mm9:2116 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 7.07e-16 | 3 |
epithelial cell of tracheobronchial tree | 7.07e-16 | 3 |
branched duct epithelial cell | 7.07e-16 | 3 |
epithelial cell of lower respiratory tract | 7.07e-16 | 3 |
respiratory epithelial cell | 7.07e-16 | 3 |
tracheal epithelial cell | 7.07e-16 | 3 |
tracheoblast | 7.07e-16 | 3 |
endodermal cell | 1.66e-11 | 20 |
epithelial cell | 4.78e-09 | 25 |
endo-epithelial cell | 3.41e-08 | 15 |
intestinal crypt stem cell | 2.04e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 2.54e-28 | 10 |
visual cortex | 2.54e-28 | 10 |
neocortex | 2.54e-28 | 10 |
regional part of cerebral cortex | 1.30e-20 | 17 |
cerebral cortex | 3.09e-20 | 21 |
cerebral hemisphere | 3.09e-20 | 21 |
pallium | 3.09e-20 | 21 |
trachea | 7.07e-16 | 3 |
respiratory airway | 7.07e-16 | 3 |
tracheobronchial tree | 7.07e-16 | 3 |
lower respiratory tract | 7.07e-16 | 3 |
brain grey matter | 2.84e-14 | 29 |
regional part of telencephalon | 2.84e-14 | 29 |
telencephalon | 2.84e-14 | 29 |
brain | 4.11e-12 | 47 |
future brain | 4.11e-12 | 47 |
gray matter | 5.74e-12 | 34 |
regional part of brain | 2.29e-10 | 46 |
regional part of forebrain | 2.99e-10 | 39 |
forebrain | 2.99e-10 | 39 |
future forebrain | 2.99e-10 | 39 |
anterior neural tube | 5.87e-10 | 40 |
neural tube | 5.58e-09 | 52 |
neural rod | 5.58e-09 | 52 |
future spinal cord | 5.58e-09 | 52 |
neural keel | 5.58e-09 | 52 |
regional part of nervous system | 1.38e-08 | 54 |
pre-chordal neural plate | 7.28e-08 | 49 |
central nervous system | 3.88e-07 | 73 |
neurectoderm | 5.53e-07 | 64 |
neural plate | 5.53e-07 | 64 |
presumptive neural plate | 5.53e-07 | 64 |
nervous system | 6.74e-07 | 75 |