FFCP PHASE1:Mm9::chr4:34011611..34011626,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=12801|HGNC=|MCL_coexpression_id=580|UniProt=P47746,B1AZT0|association_with_transcript=4bp_to_ENSMUST00000057188,NM_007726,uc008sfw.1,uc012dbm.1_5end|description=CAGE_peak_1_at_Cnr1_5end|id=chr4:34011611..34011626,+|ontology_enrichment_celltype=CL:0000540!1.62e-16!33;CL:0000047!1.62e-16!33;CL:0000031!1.62e-16!33;CL:0000404!1.62e-16!33;CL:0000221!2.10e-15!44;CL:0000133!2.10e-15!44;CL:0002319!2.85e-15!43;CL:0000117!8.65e-14!23;CL:0000337!8.65e-14!23;CL:0000393!7.00e-12!39;CL:0000211!7.00e-12!39;CL:0000055!7.86e-11!50|ontology_enrichment_celltype_v019_2=CL:0000540,2.46e-19,33;CL:0000047,2.46e-19,33;CL:0000031,2.46e-19,33;CL:0000404,2.46e-19,33;CL:0000117,4.32e-16,23;CL:0000337,4.32e-16,23;CL:0000221,4.36e-16,44;CL:0000133,4.36e-16,44;CL:0002319,6.43e-16,43;CL:0000393,5.33e-14,39;CL:0000211,5.33e-14,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.03e-29!73;UBERON:0005743!1.03e-29!73;UBERON:0000073!1.70e-29!75;UBERON:0001016!1.70e-29!75;UBERON:0004121!2.12e-29!102;UBERON:0000924!2.12e-29!102;UBERON:0006601!2.12e-29!102;UBERON:0002346!2.78e-26!71;UBERON:0003075!2.78e-26!71;UBERON:0007284!2.78e-26!71;UBERON:0001049!1.10e-22!52;UBERON:0005068!1.10e-22!52;UBERON:0006241!1.10e-22!52;UBERON:0007135!1.10e-22!52;UBERON:0000033!5.77e-22!63;UBERON:0000955!1.13e-21!50;UBERON:0006238!1.13e-21!50;UBERON:0002616!3.73e-21!49;UBERON:0002020!9.45e-21!34;UBERON:0003056!1.50e-18!49;UBERON:0002791!3.43e-18!29;UBERON:0003528!3.43e-18!29;UBERON:0001893!3.43e-18!29;UBERON:0003080!1.66e-17!40;UBERON:0002780!5.91e-17!39;UBERON:0001890!5.91e-17!39;UBERON:0006240!5.91e-17!39;UBERON:0000956!2.00e-13!21;UBERON:0001869!2.00e-13!21;UBERON:0000203!2.00e-13!21;UBERON:0002619!1.16e-10!17;UBERON:0000153!8.41e-09!94;UBERON:0007811!1.13e-08!86;UBERON:0002021!1.61e-07!10;UBERON:0000411!1.61e-07!10;UBERON:0001950!1.61e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.51e-31,73;UBERON:0001016,5.37e-30,75;UBERON:0004121,9.50e-27,95;UBERON:0000924,9.50e-27,95;UBERON:0006601,9.50e-27,95;UBERON:0002346,4.98e-26,64;UBERON:0003075,4.98e-26,64;UBERON:0007284,4.98e-26,64;UBERON:0000073,7.83e-25,54;UBERON:0002020,2.27e-24,34;UBERON:0001049,1.99e-23,52;UBERON:0005068,1.99e-23,52;UBERON:0006241,1.99e-23,52;UBERON:0007135,1.99e-23,52;UBERON:0010371,4.63e-23,73;UBERON:0003528,2.52e-21,29;UBERON:0002791,2.52e-21,29;UBERON:0001893,2.52e-21,29;UBERON:0000955,2.40e-20,47;UBERON:0006238,2.40e-20,47;UBERON:0002616,9.33e-20,46;UBERON:0003056,2.56e-19,49;UBERON:0003080,6.05e-18,40;UBERON:0002780,2.62e-17,39;UBERON:0001890,2.62e-17,39;UBERON:0006240,2.62e-17,39;UBERON:0010314,6.45e-17,92;UBERON:0000956,1.17e-15,21;UBERON:0001869,1.17e-15,21;UBERON:0000203,1.17e-15,21;UBERON:0002619,2.24e-12,17;UBERON:0002021,1.21e-08,10;UBERON:0000411,1.21e-08,10;UBERON:0001950,1.21e-08,10;UBERON:0002420,8.03e-07,8;UBERON:0007245,8.03e-07,8;UBERON:0010009,8.03e-07,8;UBERON:0010011,8.03e-07,8;UBERON:0000454,8.03e-07,8|phase1_expression=9.92922852049723,0,0.454999239389536,0,0,2.01455126294268,0.467225281191051,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,14.4573593256819,0,0,0.159992422793407,0.22940928106717,0.57423196411502,0.430761996159075,0.646413698057667,0,0.252030129759931,0,0,0,0,0.866554859253824,0.166234645358492,0,0,0,0,0,0,0,0.125896817975577,0.608261587317087,0,0.782391344348039,1.30815093828268,5.71184075109627,3.69416808241138,0.419959264876088,1.43752564364972,0,0,0,0.257259436035947,0,0,28.7289374420629,26.4495489636016,22.1840991227163,0.677689064138264,0,0,0.988866362566974,0,0.898800331555214,1.15265491596466,72.2716597790089,49.5471793677305,55.5257897967649,9.71213346972932,10.8225585066291,24.8656322406357,15.9103481890272,15.6267193723704,12.1127469099328,20.0469120793745,16.4358990584181,26.3772575460388,22.322985038988,23.962015045611,18.9844439320939,17.4456409109821,29.4900618209243,16.2045722010517,16.657486653495,25.5367240780662,1.74170244666323,0.755715601067855,0.869593466105033,0,0.679971333707751,0,0,0,2.52799956237153,0,0,0,3.23939865486365,0,0,0,0,0,0,2.2836775943812,0.258937883647172,5.93768556259299,1.73485326766136,1.21786191324856,3.45923245884088,3.3158980921577,5.64425794251383,6.6603293404728,0.247194967734374,0.722996784599558,0,1.45590164952668,0,0,0,94.5681974347297,144.937121114911,0.510914110417183,0,0,0,18.4242486467932,68.625090422794,28.0209205211688,41.8916611663386,40.6587577155226,14.1295870300501,36.6665254533132,3.1570202793598,0.870848794270651,0.252722758433675,1.26265113531884,1.82168620147785,4.13823787980251,3.42118046630164,4.06903008156431,3.6739709541717,4.35586648968489,3.65436725782942,2.32833033665114,0.431135985865684,2.64748512234947,1.58356011747554,0.876782929710299,0.834141747676794,2.43776516565517,1.4404749548556,1.19420560091096,0,0,0,0.414251545071004,0.469052119962192,0.180062061461015,0,0,0,0,0,0,0.16455984991348,0.164167464079095,0.0810688095458557,0,0,0,70.2368428204185,89.012489708081,0,0.793351699990633,1.2797295032114,0.696710015581316,0.902072229254653,2.42020229548011,1.33426826306922,1.33157938278791,1.42358718463353,0.988193728344065,1.75934646160189,3.18330355265841,0.974820435595601,3.59527763461689,1.08069024937347,1.39398891278057,0.189667900953082,0.571242563048644,0,0,0,0.0701358198903186,0.316182685621286,0.147610147979602,0.156998727841375,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0.369506380333209,2.4633883530163,0.162964976442026,0.169745085775188,0,0.167506257441816,0.238043640886014,0,1.57635144106191,2.43611158613652,2.55127629851979,0.163863314715738,1.03610989119537,0.433947175744535,0,0,0,0.551873492609465,11.8807436590966,8.55645312123083,0,0.757412781613119,4.41711507182759,5.85658116444958,4.09304455692318,7.16906393857656,10.6943363559549,15.0030561318081,2.02405350837447,5.84511715822624,3.95287777946523,12.5315313404505,1.13552068166615,3.38324646967785,4.39794790254655,0.164970122972535,0,0.728341908464944,0.302323556964751,0.565815239267694,0.295301892880773,0.307435147943927,1.29214146584111,1.45413491791002,0.712994756769443,0.632073515871632,1.05418608574999,0,0.340439605753788,1.98067203434441,0.905510786479282,0.643011105094777,0.532020700926821,1.42695054081656,2.30368628842969,0.913394847343798,0.469343416127421,0,1.32317038832977,1.48397627647332,0.968786560175433,1.20625849856312,0.835606408021955,0.164140899745061,1.45740418314925,9.45669040253599,0.170870880797853,1.23832120777933,0.370389054739423,0.565105371014073,0.136694227721025,1.14389086603261,0,0.139951452323658,0,0,2.05618395827738,2.03319467126849,0.756037385752609,1.46361807210128,0.436725127492355,0,0.578574190077352,0.523511883968059,0.648074866458964,0,3.94585057078933,0.448549638131936,0,0.972255941720238,0.904118764344118,0.675824501963113,0.938857909166032,0.781226309063701,0.629156066554265,0.483168241652012,1.72818003754719,0.316011120628178,0.608175645870493,0.102710957164827,0.25984164595559,0,0,0,0.147689527174577,0.100966449948148,0,0,0,0,0,0.226730383615211,0,0,0,0.386379188064381,0.375364950902364,0.183151624267265,0,0,29.9318476587045,35.9053684475598,30.9363577257274,29.2150409984269,29.4585483501376,30.215755895588,24.9758325085768,26.568950990229,26.2822597210839,38.3142630696347,1.764384908931,10.3746467084268,8.70741389346084,6.80698807791223,4.61148957781561,8.08911437180062,6.66740183404846,5.97501665992793,6.4183841918363,5.81203587056734,7.60437899670719,5.65879024158229,6.9294715527713,7.04276676453562,7.12199815049605,4.28664322154766,7.88013416425017,4.82273051159263,6.1812885120496,3.82717192349433,4.4573002810104,4.61437096014278,4.5302876089991,6.1045494985578,5.64656282491984,5.33072029717562,5.85369513192872,5.78753365163254,4.20992752922171,4.48913817326191,5.69448086996036,6.50129583678719,4.50154147486658,4.80304207676495,6.55882477335881,11.2414760072076,5.14649538579898,5.80151845930405,3.25190164517034,2.42650561031467,2.08681052058379|short_description=p1@Cnr1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:12801 | |||
|HGNC= | |||
|MCL_coexpression_id=580 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P47746,uniprot:B1AZT0 | |||
|association_with_transcript=4bp_to_ENSMUST00000057188,NM_007726,uc008sfw.1,uc012dbm.1_5end | |||
|cluster_id=chr4:34011611..34011626,+ | |||
|description=CAGE_peak_1_at_Cnr1_5end | |||
|id=chr4:34011611..34011626,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.62e-16!33;CL:0000047!1.62e-16!33;CL:0000031!1.62e-16!33;CL:0000404!1.62e-16!33;CL:0000221!2.10e-15!44;CL:0000133!2.10e-15!44;CL:0002319!2.85e-15!43;CL:0000117!8.65e-14!23;CL:0000337!8.65e-14!23;CL:0000393!7.00e-12!39;CL:0000211!7.00e-12!39;CL:0000055!7.86e-11!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.46e-19,33;CL:0000047,2.46e-19,33;CL:0000031,2.46e-19,33;CL:0000404,2.46e-19,33;CL:0000117,4.32e-16,23;CL:0000337,4.32e-16,23;CL:0000221,4.36e-16,44;CL:0000133,4.36e-16,44;CL:0002319,6.43e-16,43;CL:0000393,5.33e-14,39;CL:0000211,5.33e-14,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.03e-29!73;UBERON:0005743!1.03e-29!73;UBERON:0000073!1.70e-29!75;UBERON:0001016!1.70e-29!75;UBERON:0004121!2.12e-29!102;UBERON:0000924!2.12e-29!102;UBERON:0006601!2.12e-29!102;UBERON:0002346!2.78e-26!71;UBERON:0003075!2.78e-26!71;UBERON:0007284!2.78e-26!71;UBERON:0001049!1.10e-22!52;UBERON:0005068!1.10e-22!52;UBERON:0006241!1.10e-22!52;UBERON:0007135!1.10e-22!52;UBERON:0000033!5.77e-22!63;UBERON:0000955!1.13e-21!50;UBERON:0006238!1.13e-21!50;UBERON:0002616!3.73e-21!49;UBERON:0002020!9.45e-21!34;UBERON:0003056!1.50e-18!49;UBERON:0002791!3.43e-18!29;UBERON:0003528!3.43e-18!29;UBERON:0001893!3.43e-18!29;UBERON:0003080!1.66e-17!40;UBERON:0002780!5.91e-17!39;UBERON:0001890!5.91e-17!39;UBERON:0006240!5.91e-17!39;UBERON:0000956!2.00e-13!21;UBERON:0001869!2.00e-13!21;UBERON:0000203!2.00e-13!21;UBERON:0002619!1.16e-10!17;UBERON:0000153!8.41e-09!94;UBERON:0007811!1.13e-08!86;UBERON:0002021!1.61e-07!10;UBERON:0000411!1.61e-07!10;UBERON:0001950!1.61e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.51e-31,73;UBERON:0001016,5.37e-30,75;UBERON:0004121,9.50e-27,95;UBERON:0000924,9.50e-27,95;UBERON:0006601,9.50e-27,95;UBERON:0002346,4.98e-26,64;UBERON:0003075,4.98e-26,64;UBERON:0007284,4.98e-26,64;UBERON:0000073,7.83e-25,54;UBERON:0002020,2.27e-24,34;UBERON:0001049,1.99e-23,52;UBERON:0005068,1.99e-23,52;UBERON:0006241,1.99e-23,52;UBERON:0007135,1.99e-23,52;UBERON:0010371,4.63e-23,73;UBERON:0003528,2.52e-21,29;UBERON:0002791,2.52e-21,29;UBERON:0001893,2.52e-21,29;UBERON:0000955,2.40e-20,47;UBERON:0006238,2.40e-20,47;UBERON:0002616,9.33e-20,46;UBERON:0003056,2.56e-19,49;UBERON:0003080,6.05e-18,40;UBERON:0002780,2.62e-17,39;UBERON:0001890,2.62e-17,39;UBERON:0006240,2.62e-17,39;UBERON:0010314,6.45e-17,92;UBERON:0000956,1.17e-15,21;UBERON:0001869,1.17e-15,21;UBERON:0000203,1.17e-15,21;UBERON:0002619,2.24e-12,17;UBERON:0002021,1.21e-08,10;UBERON:0000411,1.21e-08,10;UBERON:0001950,1.21e-08,10;UBERON:0002420,8.03e-07,8;UBERON:0007245,8.03e-07,8;UBERON:0010009,8.03e-07,8;UBERON:0010011,8.03e-07,8;UBERON:0000454,8.03e-07,8 | |||
|phase1_expression=9.92922852049723,0,0.454999239389536,0,0,2.01455126294268,0.467225281191051,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,14.4573593256819,0,0,0.159992422793407,0.22940928106717,0.57423196411502,0.430761996159075,0.646413698057667,0,0.252030129759931,0,0,0,0,0.866554859253824,0.166234645358492,0,0,0,0,0,0,0,0.125896817975577,0.608261587317087,0,0.782391344348039,1.30815093828268,5.71184075109627,3.69416808241138,0.419959264876088,1.43752564364972,0,0,0,0.257259436035947,0,0,28.7289374420629,26.4495489636016,22.1840991227163,0.677689064138264,0,0,0.988866362566974,0,0.898800331555214,1.15265491596466,72.2716597790089,49.5471793677305,55.5257897967649,9.71213346972932,10.8225585066291,24.8656322406357,15.9103481890272,15.6267193723704,12.1127469099328,20.0469120793745,16.4358990584181,26.3772575460388,22.322985038988,23.962015045611,18.9844439320939,17.4456409109821,29.4900618209243,16.2045722010517,16.657486653495,25.5367240780662,1.74170244666323,0.755715601067855,0.869593466105033,0,0.679971333707751,0,0,0,2.52799956237153,0,0,0,3.23939865486365,0,0,0,0,0,0,2.2836775943812,0.258937883647172,5.93768556259299,1.73485326766136,1.21786191324856,3.45923245884088,3.3158980921577,5.64425794251383,6.6603293404728,0.247194967734374,0.722996784599558,0,1.45590164952668,0,0,0,94.5681974347297,144.937121114911,0.510914110417183,0,0,0,18.4242486467932,68.625090422794,28.0209205211688,41.8916611663386,40.6587577155226,14.1295870300501,36.6665254533132,3.1570202793598,0.870848794270651,0.252722758433675,1.26265113531884,1.82168620147785,4.13823787980251,3.42118046630164,4.06903008156431,3.6739709541717,4.35586648968489,3.65436725782942,2.32833033665114,0.431135985865684,2.64748512234947,1.58356011747554,0.876782929710299,0.834141747676794,2.43776516565517,1.4404749548556,1.19420560091096,0,0,0,0.414251545071004,0.469052119962192,0.180062061461015,0,0,0,0,0,0,0.16455984991348,0.164167464079095,0.0810688095458557,0,0,0,70.2368428204185,89.012489708081,0,0.793351699990633,1.2797295032114,0.696710015581316,0.902072229254653,2.42020229548011,1.33426826306922,1.33157938278791,1.42358718463353,0.988193728344065,1.75934646160189,3.18330355265841,0.974820435595601,3.59527763461689,1.08069024937347,1.39398891278057,0.189667900953082,0.571242563048644,0,0,0,0.0701358198903186,0.316182685621286,0.147610147979602,0.156998727841375,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0.369506380333209,2.4633883530163,0.162964976442026,0.169745085775188,0,0.167506257441816,0.238043640886014,0,1.57635144106191,2.43611158613652,2.55127629851979,0.163863314715738,1.03610989119537,0.433947175744535,0,0,0,0.551873492609465,11.8807436590966,8.55645312123083,0,0.757412781613119,4.41711507182759,5.85658116444958,4.09304455692318,7.16906393857656,10.6943363559549,15.0030561318081,2.02405350837447,5.84511715822624,3.95287777946523,12.5315313404505,1.13552068166615,3.38324646967785,4.39794790254655,0.164970122972535,0,0.728341908464944,0.302323556964751,0.565815239267694,0.295301892880773,0.307435147943927,1.29214146584111,1.45413491791002,0.712994756769443,0.632073515871632,1.05418608574999,0,0.340439605753788,1.98067203434441,0.905510786479282,0.643011105094777,0.532020700926821,1.42695054081656,2.30368628842969,0.913394847343798,0.469343416127421,0,1.32317038832977,1.48397627647332,0.968786560175433,1.20625849856312,0.835606408021955,0.164140899745061,1.45740418314925,9.45669040253599,0.170870880797853,1.23832120777933,0.370389054739423,0.565105371014073,0.136694227721025,1.14389086603261,0,0.139951452323658,0,0,2.05618395827738,2.03319467126849,0.756037385752609,1.46361807210128,0.436725127492355,0,0.578574190077352,0.523511883968059,0.648074866458964,0,3.94585057078933,0.448549638131936,0,0.972255941720238,0.904118764344118,0.675824501963113,0.938857909166032,0.781226309063701,0.629156066554265,0.483168241652012,1.72818003754719,0.316011120628178,0.608175645870493,0.102710957164827,0.25984164595559,0,0,0,0.147689527174577,0.100966449948148,0,0,0,0,0,0.226730383615211,0,0,0,0.386379188064381,0.375364950902364,0.183151624267265,0,0,29.9318476587045,35.9053684475598,30.9363577257274,29.2150409984269,29.4585483501376,30.215755895588,24.9758325085768,26.568950990229,26.2822597210839,38.3142630696347,1.764384908931,10.3746467084268,8.70741389346084,6.80698807791223,4.61148957781561,8.08911437180062,6.66740183404846,5.97501665992793,6.4183841918363,5.81203587056734,7.60437899670719,5.65879024158229,6.9294715527713,7.04276676453562,7.12199815049605,4.28664322154766,7.88013416425017,4.82273051159263,6.1812885120496,3.82717192349433,4.4573002810104,4.61437096014278,4.5302876089991,6.1045494985578,5.64656282491984,5.33072029717562,5.85369513192872,5.78753365163254,4.20992752922171,4.48913817326191,5.69448086996036,6.50129583678719,4.50154147486658,4.80304207676495,6.55882477335881,11.2414760072076,5.14649538579898,5.80151845930405,3.25190164517034,2.42650561031467,2.08681052058379 | |||
|short_description=p1@Cnr1 | |||
}} |
Revision as of 09:46, 5 August 2015
Short description: | p1@Cnr1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cnr1_5end |
Coexpression cluster: | MCL_coexpression_mm9:580 |
Association with transcript: | 4bp_to_ENSMUST00000057188, NM_007726, uc008sfw.1, uc012dbm.1_5end |
EntrezGene: | 12801 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.46e-19 | 33 |
neuronal stem cell | 2.46e-19 | 33 |
neuroblast | 2.46e-19 | 33 |
electrically signaling cell | 2.46e-19 | 33 |
CNS neuron (sensu Vertebrata) | 4.32e-16 | 23 |
neuroblast (sensu Vertebrata) | 4.32e-16 | 23 |
ectodermal cell | 4.36e-16 | 44 |
neurectodermal cell | 4.36e-16 | 44 |
neural cell | 6.43e-16 | 43 |
electrically responsive cell | 5.33e-14 | 39 |
electrically active cell | 5.33e-14 | 39 |