FFCP PHASE1:Mm9::chr11:116274329..116274383,-: Difference between revisions
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{{FFCP|EntrezGene=217340|HGNC=|MCL_coexpression_id=1|UniProt=A2AAN9|association_with_transcript=0bp_to_ENSMUST00000149682,NM_027258,uc007mky.2,uc007mla.1_5end|description=CAGE_peak_1_at_Rnf157_5end|id=chr11:116274329..116274383,-|ontology_enrichment_celltype=CL:0000540!1.24e-15!33;CL:0000047!1.24e-15!33;CL:0000031!1.24e-15!33;CL:0000404!1.24e-15!33;CL:0002319!2.13e-15!43;CL:0000221!3.43e-15!44;CL:0000133!3.43e-15!44;CL:0000055!3.20e-13!50;CL:0000393!4.67e-13!39;CL:0000211!4.67e-13!39;CL:0000117!4.94e-13!23;CL:0000337!4.94e-13!23|ontology_enrichment_celltype_v019_2=CL:0000540,1.23e-15,33;CL:0000047,1.23e-15,33;CL:0000031,1.23e-15,33;CL:0000404,1.23e-15,33;CL:0002319,2.12e-15,43;CL:0000221,3.41e-15,44;CL:0000133,3.41e-15,44;CL:0000393,4.65e-13,39;CL:0000211,4.65e-13,39;CL:0000117,4.91e-13,23;CL:0000337,4.91e-13,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!9.06e-30!73;UBERON:0005743!9.06e-30!73;UBERON:0000073!4.02e-29!75;UBERON:0001016!4.02e-29!75;UBERON:0004121!8.90e-23!102;UBERON:0000924!8.90e-23!102;UBERON:0006601!8.90e-23!102;UBERON:0000033!5.35e-21!63;UBERON:0001049!5.81e-21!52;UBERON:0005068!5.81e-21!52;UBERON:0006241!5.81e-21!52;UBERON:0007135!5.81e-21!52;UBERON:0002346!7.74e-21!71;UBERON:0003075!7.74e-21!71;UBERON:0007284!7.74e-21!71;UBERON:0000955!5.68e-20!50;UBERON:0006238!5.68e-20!50;UBERON:0002616!2.25e-19!49;UBERON:0000153!2.60e-19!94;UBERON:0007811!1.67e-18!86;UBERON:0002020!2.76e-18!34;UBERON:0003056!7.59e-18!49;UBERON:0002791!1.89e-15!29;UBERON:0003528!1.89e-15!29;UBERON:0001893!1.89e-15!29;UBERON:0003080!9.74e-15!40;UBERON:0002780!4.24e-14!39;UBERON:0001890!4.24e-14!39;UBERON:0006240!4.24e-14!39;UBERON:0000956!2.52e-11!21;UBERON:0001869!2.52e-11!21;UBERON:0000203!2.52e-11!21;UBERON:0002619!2.83e-09!17;UBERON:0002021!9.30e-08!10;UBERON:0000411!9.30e-08!10;UBERON:0001950!9.30e-08!10;UBERON:0003076!4.88e-07!12;UBERON:0003057!4.88e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.96e-30,73;UBERON:0001016,3.98e-29,75;UBERON:0004121,2.40e-26,95;UBERON:0000924,2.40e-26,95;UBERON:0006601,2.40e-26,95;UBERON:0002346,2.10e-25,64;UBERON:0003075,2.10e-25,64;UBERON:0007284,2.10e-25,64;UBERON:0000073,2.43e-22,54;UBERON:0001049,5.77e-21,52;UBERON:0005068,5.77e-21,52;UBERON:0006241,5.77e-21,52;UBERON:0007135,5.77e-21,52;UBERON:0010371,3.89e-20,73;UBERON:0002020,2.75e-18,34;UBERON:0000955,5.98e-18,47;UBERON:0006238,5.98e-18,47;UBERON:0003056,7.54e-18,49;UBERON:0002616,2.29e-17,46;UBERON:0003528,1.88e-15,29;UBERON:0002791,1.88e-15,29;UBERON:0001893,1.88e-15,29;UBERON:0003080,9.68e-15,40;UBERON:0002780,4.22e-14,39;UBERON:0001890,4.22e-14,39;UBERON:0006240,4.22e-14,39;UBERON:0010314,2.36e-13,92;UBERON:0000956,2.51e-11,21;UBERON:0001869,2.51e-11,21;UBERON:0000203,2.51e-11,21;UBERON:0002619,2.82e-09,17;UBERON:0002021,9.27e-08,10;UBERON:0000411,9.27e-08,10;UBERON:0001950,9.27e-08,10;UBERON:0003076,4.87e-07,12;UBERON:0003057,4.87e-07,12|phase1_expression=7.36684696682052,0,0,0,0,6.71517087647559,4.90586545250604,2.45334314538995,3.801295498095,9.36258105287974,7.0199366972457,11.8062795313098,2.73921167889929,5.85716696207283,9.66018309265422,6.2767332890846,8.39474253753776,12.7762176970086,11.1062691220648,11.4585205985468,10.5453679787327,8.73760370567791,9.14199261986274,2.07990149631429,1.60586496747019,0,0.430761996159075,1.939241094173,0.570070258369122,0.252030129759931,2.43903561720835,21.5910428976275,27.0628506537211,0,2.02196133825892,1.66234645358492,2.04169356262369,1.25559489221072,0.7813353445238,0.523523743973798,0,0,0.485510353031154,6.92432498865675,10.44182391561,7.15832333430558,10.9534788208725,9.59310688073965,6.37089929929968,7.19390626574849,6.57936181639204,10.062679505548,9.56360854529097,1.45072428402269,2.68875039313971,1.80081605225163,6.5902691185914,2.06268836910977,25.4918740683093,26.9785399428737,31.0577387718028,4.06613438482959,2.66788438833342,13.498495759221,8.89979726310277,10.6572017241915,14.3808053048834,14.9845139075406,23.6412316063329,28.2162411113233,21.8737959805437,47.7037143954352,37.5476519617743,24.3756690437759,20.5109307979026,29.4150011715207,48.450987639731,60.523798252379,51.4581886408416,24.1351906546255,22.5059603261928,16.1483144872596,51.0904888172527,21.3849791812038,42.7835093775068,38.3017161115768,35.0234334765793,25.7231235238915,3.86203585999239,8.76630097238712,13.0439019915755,6.88339101585109,0,0,1.29955283489534,1.34408066129201,8.98844288843212,2.21559419351475,2.33807404142582,1.06001872353102,6.76048414928066,6.41632387071589,17.8363667794652,14.2213340630666,4.32982082022428,3.04031838570118,5.56076889516262,2.8545969929765,8.54495016035667,3.41416919849097,5.20455980298408,3.65358573974569,4.15107895060905,5.27529241934179,3.05730638552832,2.13633205260448,11.1237735480468,2.02439099687876,4.42305275974937,9.22071044700232,10.6003928860989,5.33362778448744,0,24.8863677459815,19.4785437336513,2.29911349687732,4.55297473122497,3.59941638596045,2.92261522268049,52.7263050704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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:217340 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:A2AAN9 | |||
|association_with_transcript=0bp_to_ENSMUST00000149682,NM_027258,uc007mky.2,uc007mla.1_5end | |||
|cluster_id=chr11:116274329..116274383,- | |||
|description=CAGE_peak_1_at_Rnf157_5end | |||
|id=chr11:116274329..116274383,- | |||
|ontology_enrichment_celltype=CL:0000540!1.24e-15!33;CL:0000047!1.24e-15!33;CL:0000031!1.24e-15!33;CL:0000404!1.24e-15!33;CL:0002319!2.13e-15!43;CL:0000221!3.43e-15!44;CL:0000133!3.43e-15!44;CL:0000055!3.20e-13!50;CL:0000393!4.67e-13!39;CL:0000211!4.67e-13!39;CL:0000117!4.94e-13!23;CL:0000337!4.94e-13!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.23e-15,33;CL:0000047,1.23e-15,33;CL:0000031,1.23e-15,33;CL:0000404,1.23e-15,33;CL:0002319,2.12e-15,43;CL:0000221,3.41e-15,44;CL:0000133,3.41e-15,44;CL:0000393,4.65e-13,39;CL:0000211,4.65e-13,39;CL:0000117,4.91e-13,23;CL:0000337,4.91e-13,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.06e-30!73;UBERON:0005743!9.06e-30!73;UBERON:0000073!4.02e-29!75;UBERON:0001016!4.02e-29!75;UBERON:0004121!8.90e-23!102;UBERON:0000924!8.90e-23!102;UBERON:0006601!8.90e-23!102;UBERON:0000033!5.35e-21!63;UBERON:0001049!5.81e-21!52;UBERON:0005068!5.81e-21!52;UBERON:0006241!5.81e-21!52;UBERON:0007135!5.81e-21!52;UBERON:0002346!7.74e-21!71;UBERON:0003075!7.74e-21!71;UBERON:0007284!7.74e-21!71;UBERON:0000955!5.68e-20!50;UBERON:0006238!5.68e-20!50;UBERON:0002616!2.25e-19!49;UBERON:0000153!2.60e-19!94;UBERON:0007811!1.67e-18!86;UBERON:0002020!2.76e-18!34;UBERON:0003056!7.59e-18!49;UBERON:0002791!1.89e-15!29;UBERON:0003528!1.89e-15!29;UBERON:0001893!1.89e-15!29;UBERON:0003080!9.74e-15!40;UBERON:0002780!4.24e-14!39;UBERON:0001890!4.24e-14!39;UBERON:0006240!4.24e-14!39;UBERON:0000956!2.52e-11!21;UBERON:0001869!2.52e-11!21;UBERON:0000203!2.52e-11!21;UBERON:0002619!2.83e-09!17;UBERON:0002021!9.30e-08!10;UBERON:0000411!9.30e-08!10;UBERON:0001950!9.30e-08!10;UBERON:0003076!4.88e-07!12;UBERON:0003057!4.88e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.96e-30,73;UBERON:0001016,3.98e-29,75;UBERON:0004121,2.40e-26,95;UBERON:0000924,2.40e-26,95;UBERON:0006601,2.40e-26,95;UBERON:0002346,2.10e-25,64;UBERON:0003075,2.10e-25,64;UBERON:0007284,2.10e-25,64;UBERON:0000073,2.43e-22,54;UBERON:0001049,5.77e-21,52;UBERON:0005068,5.77e-21,52;UBERON:0006241,5.77e-21,52;UBERON:0007135,5.77e-21,52;UBERON:0010371,3.89e-20,73;UBERON:0002020,2.75e-18,34;UBERON:0000955,5.98e-18,47;UBERON:0006238,5.98e-18,47;UBERON:0003056,7.54e-18,49;UBERON:0002616,2.29e-17,46;UBERON:0003528,1.88e-15,29;UBERON:0002791,1.88e-15,29;UBERON:0001893,1.88e-15,29;UBERON:0003080,9.68e-15,40;UBERON:0002780,4.22e-14,39;UBERON:0001890,4.22e-14,39;UBERON:0006240,4.22e-14,39;UBERON:0010314,2.36e-13,92;UBERON:0000956,2.51e-11,21;UBERON:0001869,2.51e-11,21;UBERON:0000203,2.51e-11,21;UBERON:0002619,2.82e-09,17;UBERON:0002021,9.27e-08,10;UBERON:0000411,9.27e-08,10;UBERON:0001950,9.27e-08,10;UBERON:0003076,4.87e-07,12;UBERON:0003057,4.87e-07,12 | |||
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| |||
|short_description=p1@Rnf157 | |||
}} |
Revision as of 12:02, 5 August 2015
Short description: | p1@Rnf157 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rnf157_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000149682, NM_027258, uc007mky.2, uc007mla.1_5end |
EntrezGene: | 217340 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.23e-15 | 33 |
neuronal stem cell | 1.23e-15 | 33 |
neuroblast | 1.23e-15 | 33 |
electrically signaling cell | 1.23e-15 | 33 |
neural cell | 2.12e-15 | 43 |
ectodermal cell | 3.41e-15 | 44 |
neurectodermal cell | 3.41e-15 | 44 |
electrically responsive cell | 4.65e-13 | 39 |
electrically active cell | 4.65e-13 | 39 |
CNS neuron (sensu Vertebrata) | 4.91e-13 | 23 |
neuroblast (sensu Vertebrata) | 4.91e-13 | 23 |