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FFCP PHASE1:Mm9::chr6:41492719..41492776,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=
|EntrezGene=
|HGNC=
|HGNC=
|MCL_coexpression_id=785
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000103293,uc009bpq.1_5end
|association_with_transcript=0bp_to_ENSMUST00000103293,uc009bpq.1_5end
|cluster_id=chr6:41492719..41492776,+
|description=CAGE_peak_1_at_ENSMUST00000103293_5end,CAGE_peak_1_at_uc009bpq.1_5end
|description=CAGE_peak_1_at_ENSMUST00000103293_5end,CAGE_peak_1_at_uc009bpq.1_5end
|id=chr6:41492719..41492776,+
|id=chr6:41492719..41492776,+
|ontology_enrichment_celltype=CL:0000791!3.75e-08!9;CL:0000789!3.75e-08!9;CL:0002420!3.75e-08!9;CL:0002419!3.75e-08!9;CL:0000790!3.75e-08!9;CL:0000624!1.73e-07!8
|ontology_enrichment_celltype=CL:0000791!3.75e-08!9;CL:0000789!3.75e-08!9;CL:0002420!3.75e-08!9;CL:0002419!3.75e-08!9;CL:0000790!3.75e-08!9;CL:0000624!1.73e-07!8
|ontology_enrichment_celltype_v019_2=CL:0000791,2.38e-16,9;CL:0000789,2.38e-16,9;CL:0002420,2.38e-16,9;CL:0002419,2.38e-16,9;CL:0000790,2.38e-16,9;CL:0000624,7.29e-15,8;CL:0000084,5.60e-13,11;CL:0000827,5.60e-13,11;CL:0000893,7.10e-12,6;CL:0002489,7.10e-12,6;CL:0000898,7.10e-12,6;CL:0000809,7.10e-12,6;CL:0000810,7.10e-12,6;CL:0000895,7.10e-12,6;CL:0000808,7.10e-12,6;CL:0000894,7.10e-12,6;CL:0000806,7.10e-12,6;CL:0000807,7.10e-12,6;CL:0000805,7.10e-12,6;CL:0002425,7.10e-12,6;CL:0002436,7.10e-12,6;CL:0002427,7.10e-12,6;CL:0002428,7.10e-12,6;CL:0002429,7.10e-12,6;CL:0002433,7.10e-12,6;CL:0002431,7.10e-12,6;CL:0002432,7.10e-12,6;CL:0000838,1.02e-11,12;CL:0000542,1.19e-10,13;CL:0000051,1.19e-10,13;CL:0002031,3.17e-08,25;CL:0000738,1.18e-07,17;CL:0002087,1.18e-07,17
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004177!2.32e-16!29;UBERON:0003408!2.15e-13!24;UBERON:0002370!4.06e-13!23;UBERON:0000974!4.06e-13!23;UBERON:0004807!4.06e-13!23;UBERON:0005058!4.06e-13!23;UBERON:0003351!4.06e-13!23;UBERON:0009113!4.06e-13!23;UBERON:0003295!4.06e-13!23;UBERON:0009722!4.06e-13!23;UBERON:0005562!4.06e-13!23;UBERON:0007690!4.06e-13!23;UBERON:0006562!4.02e-12!24;UBERON:0001557!4.02e-12!24;UBERON:0001042!4.02e-12!24;UBERON:0008814!4.02e-12!24;UBERON:0009145!4.02e-12!24;UBERON:0002193!5.27e-12!48;UBERON:0001004!1.51e-11!42;UBERON:0000065!3.11e-11!41;UBERON:0002390!4.12e-11!45;UBERON:0003061!4.12e-11!45;UBERON:0004119!2.28e-10!130;UBERON:0000925!2.28e-10!130;UBERON:0006595!2.28e-10!130;UBERON:0001007!2.45e-10!128;UBERON:0001555!2.45e-10!128;UBERON:0007026!2.45e-10!128;UBERON:0005057!2.91e-10!51;UBERON:0004921!5.70e-10!126;UBERON:0004185!5.70e-10!126;UBERON:0001041!6.68e-10!92;UBERON:0000072!1.25e-09!27;UBERON:0000077!1.57e-09!97;UBERON:0002405!5.59e-09!70;UBERON:0000063!2.63e-07!35
|ontology_enrichment_uberon_v019_2=UBERON:0004177,4.38e-35,29;UBERON:0005057,4.38e-35,29;UBERON:0002370,2.73e-30,23;UBERON:0000974,2.73e-30,23;UBERON:0004807,2.73e-30,23;UBERON:0005058,2.73e-30,23;UBERON:0003351,2.73e-30,23;UBERON:0009113,2.73e-30,23;UBERON:0003295,2.73e-30,23;UBERON:0009722,2.73e-30,23;UBERON:0005562,2.73e-30,23;UBERON:0007690,2.73e-30,23;UBERON:0006562,9.04e-29,24;UBERON:0003408,9.04e-29,24;UBERON:0001557,9.04e-29,24;UBERON:0001042,9.04e-29,24;UBERON:0008814,9.04e-29,24;UBERON:0009145,9.04e-29,24;UBERON:0000077,8.55e-28,35;UBERON:0002390,8.58e-26,45;UBERON:0003061,8.58e-26,45;UBERON:0002193,1.14e-25,48;UBERON:0002405,1.14e-25,48;UBERON:0000072,6.85e-25,27;UBERON:0007811,3.68e-17,36;UBERON:0000065,5.62e-16,41;UBERON:0001004,1.89e-15,42;UBERON:0000153,2.05e-13,43;UBERON:0000949,8.89e-12,72;UBERON:0003081,1.99e-10,87;UBERON:0003929,2.92e-09,55;UBERON:0001041,3.91e-09,80;UBERON:0002368,6.75e-09,60;UBERON:0002530,8.74e-08,65;UBERON:0002075,2.28e-07,19;UBERON:0005911,3.89e-07,69;UBERON:0000490,7.78e-07,66;UBERON:0004921,8.59e-07,114
|phase1_expression=0,0.348975407639361,0,0,0,0,0,46.4843964389675,155.853115421895,194.507621373577,165.054121369387,152.683912317074,40.5745729936958,42.7485767828897,0.333109761815663,0.607425802169478,0,4.88966356305268,2.87940310572051,2.54633791078818,2.72138528483423,0.198581902401771,0,0.159992422793407,0.68822784320151,0,0,0,1.14014051673824,2.26827116783938,0.443461021310609,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0,0,0,33.3666585325218,34.2815675125313,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0.15279824777681,0,0,0,0.454357159999104,0,0,0.860423876981386,0,0,0,0,2.94933282276679,0,0,0,0,0,0,0,0,0,0,1.82694207550496,4.14300613835475,0.148442139064825,1.04091196059682,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0,0.220841518460394,0,1.86391761218122,0,0,0.510914110417183,0,0,0,0,0,0,0.347648640384553,0.767146371990992,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995171334092466,0,0,0,0,0.234526059981096,0,0.23674473558521,0.590292695242212,0,0,0,0.934122738937356,0,1.14917224855367,0.405344047729279,0.146199987425332,0.439100230582101,0,0,0,1.32167513193519,0.264450566663544,0,0,0.257734922644187,0.201683524623343,0.22237804384487,0.190225626112559,0,0.329397909448022,0.251335208800269,0.596869416123452,0.19496408711912,0,0.432276099749388,0.398282546508734,0.189667900953082,0,0,0,0,0,0.0632365371242573,0,0,0,0,0.500535317148282,0.196558995113203,0.674586337154561,0,0.241177159752417,0.25462585178142,0,0.162135226775035,0.274561413188081,0,0.744281895337007,0.312037673114561,0.505157755894224,0,0,0.923765950833023,0.757965647081939,0,0.339490171550376,0,3.35012514883632,0,0.195133647857799,0.630540576424764,0.664394068946325,0.637819074629948,0.983179888294428,0.690739927463582,0.723245292907558,0,0,0.491764273019036,0.275936746304732,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,1.209294227859,1.32023555829129,1.18120757152309,3.3817866273832,1.29214146584111,0.363533729477506,1.42598951353889,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0.704015124191131,0,0,1.48397627647332,0,0.180938774784468,0.358117032009409,0.328281799490123,0.582961673259701,0,2.56306321196779,1.03193433981611,1.66675074632741,0.941842285023455,1.0935538217682,2.28778173206523,0.849892149969277,0.559805809294632,1.10559979043539,0,0,0.203319467126849,0.432021363287205,0,0.218362563746178,0,0,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0.234714477291508,0,0,0,0,110.603892219862,60.2093889411788,60.4967537700833,63.9210449050751,78.7717460936918,80.267267331631,72.3576606110212,81.2292399460175,87.2350127551995,92.1340292458948,108.287322836967,85.8603929317219,80.3368877696751,101.33227419142,0,0,0,0,0,0.93841237725591,0.183151624267265,0.643105137237198,0,0.564751842617067,1.38097570952153,1.71868654031819,0.859265911718438,0.685082519770642,0.755393897389701,1.35004500046361,0.45032120322422,0.453142408984205,0.51776031175182,0,0.399024873401031,0.512200817262403,0.486213434136588,0.209613162627982,0.735374033800057,0.44449345560323,0.618105171716683,0.64183841918363,0.252697211763798,0,0.377252682772152,0.37456602987953,0.256100609619477,0.574354689556133,0,0.231768651889711,0.77163688185482,0,0.294397840268795,0.685738504770831,0.177475806159338,0,0,0.470546902076653,0.0846146078916765,0,0.263069711437843,0.543216455383447,0,0.355905054372522,0.197008964751127,0.409231043169689,0.154936841185966,0.771626443924566,0,1.16965804222704,1.71896843238639,0,0,0.231867835620421
|phase1_expression=0,0.348975407639361,0,0,0,0,0,46.4843964389675,155.853115421895,194.507621373577,165.054121369387,152.683912317074,40.5745729936958,42.7485767828897,0.333109761815663,0.607425802169478,0,4.88966356305268,2.87940310572051,2.54633791078818,2.72138528483423,0.198581902401771,0,0.159992422793407,0.68822784320151,0,0,0,1.14014051673824,2.26827116783938,0.443461021310609,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0,0,0,33.3666585325218,34.2815675125313,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0.15279824777681,0,0,0,0.454357159999104,0,0,0.860423876981386,0,0,0,0,2.94933282276679,0,0,0,0,0,0,0,0,0,0,1.82694207550496,4.14300613835475,0.148442139064825,1.04091196059682,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0,0.220841518460394,0,1.86391761218122,0,0,0.510914110417183,0,0,0,0,0,0,0.347648640384553,0.767146371990992,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995171334092466,0,0,0,0,0.234526059981096,0,0.23674473558521,0.590292695242212,0,0,0,0.934122738937356,0,1.14917224855367,0.405344047729279,0.146199987425332,0.439100230582101,0,0,0,1.32167513193519,0.264450566663544,0,0,0.257734922644187,0.201683524623343,0.22237804384487,0.190225626112559,0,0.329397909448022,0.251335208800269,0.596869416123452,0.19496408711912,0,0.432276099749388,0.398282546508734,0.189667900953082,0,0,0,0,0,0.0632365371242573,0,0,0,0,0.500535317148282,0.196558995113203,0.674586337154561,0,0.241177159752417,0.25462585178142,0,0.162135226775035,0.274561413188081,0,0.744281895337007,0.312037673114561,0.505157755894224,0,0,0.923765950833023,0.757965647081939,0,0.339490171550376,0,3.35012514883632,0,0.195133647857799,0.630540576424764,0.664394068946325,0.637819074629948,0.983179888294428,0.690739927463582,0.723245292907558,0,0,0.491764273019036,0.275936746304732,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,1.209294227859,1.32023555829129,1.18120757152309,3.3817866273832,1.29214146584111,0.363533729477506,1.42598951353889,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0.704015124191131,0,0,1.48397627647332,0,0.180938774784468,0.358117032009409,0.328281799490123,0.582961673259701,0,2.56306321196779,1.03193433981611,1.66675074632741,0.941842285023455,1.0935538217682,2.28778173206523,0.849892149969277,0.559805809294632,1.10559979043539,0,0,0.203319467126849,0.432021363287205,0,0.218362563746178,0,0,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0.234714477291508,0,0,0,0,110.603892219862,60.2093889411788,60.4967537700833,63.9210449050751,78.7717460936918,80.267267331631,72.3576606110212,81.2292399460175,87.2350127551995,92.1340292458948,108.287322836967,85.8603929317219,80.3368877696751,101.33227419142,0,0,0,0,0,0.93841237725591,0.183151624267265,0.643105137237198,0,0.564751842617067,1.38097570952153,1.71868654031819,0.859265911718438,0.685082519770642,0.755393897389701,1.35004500046361,0.45032120322422,0.453142408984205,0.51776031175182,0,0.399024873401031,0.512200817262403,0.486213434136588,0.209613162627982,0.735374033800057,0.44449345560323,0.618105171716683,0.64183841918363,0.252697211763798,0,0.377252682772152,0.37456602987953,0.256100609619477,0.574354689556133,0,0.231768651889711,0.77163688185482,0,0.294397840268795,0.685738504770831,0.177475806159338,0,0,0.470546902076653,0.0846146078916765,0,0.263069711437843,0.543216455383447,0,0.355905054372522,0.197008964751127,0.409231043169689,0.154936841185966,0.771626443924566,0,1.16965804222704,1.71896843238639,0,0,0.231867835620421
|short_description=p1@ENSMUST00000103293,p1@uc009bpq.1
|short_description=p1@ENSMUST00000103293,p1@uc009bpq.1
}}
}}

Latest revision as of 17:51, 5 August 2015

Short description:p1@ENSMUST00000103293, p1@uc009bpq.1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_ENSMUST00000103293_5end, CAGE_peak_1_at_uc009bpq.1_5end
Coexpression cluster:MCL_coexpression_mm9:785
Association with transcript: 0bp_to_ENSMUST00000103293, uc009bpq.1_5end
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@ENSMUST00000103293p1@uc009bpq.1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E946.48
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7155.85
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2194.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6165.05
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F1152.68
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E440.57
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E842.75
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A24.89
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.88
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.55
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.72
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B91.14
Ileum epithelium, pool2.CNhs13232.10253-104C12.27
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I933.37
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A134.28
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.45
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.95
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.83
accessory axillary lymph node, adult.CNhs10475.1063-29H94.14
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.93
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G11.15
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A63.35
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.98
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E51.32
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I73.38
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C31.48
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G22.56
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F21.67
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H11.09
spleen, neonate N25.CNhs11099.1354-25G32.29
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.11
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B5110.60
thymus, embryo E14.CNhs11041.402-44I460.21
thymus, embryo E15.CNhs11005.430-45I260.50
thymus, embryo E16.CNhs11002.456-26C563.92
thymus, embryo E17.CNhs10581.478-18C178.77
thymus, embryo E18.CNhs10595.1273-19G480.27
thymus, neonate N02.CNhs11181.1541-43F872.36
thymus, neonate N03.CNhs11137.2104-43C781.23
thymus, neonate N06.CNhs11197.681-26C487.24
thymus, neonate N07.CNhs11211.713-19D392.13
thymus, neonate N10.CNhs11194.748-24E4108.29
thymus, neonate N20.CNhs11186.820-7A285.86
thymus, neonate N25.CNhs11125.1362-25G780.34
thymus, neonate N30.CNhs11132.1393-42G2101.33
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
mature alpha-beta T cell2.38e-169
alpha-beta T cell2.38e-169
immature T cell2.38e-169
mature T cell2.38e-169
immature alpha-beta T cell2.38e-169
CD4-positive, alpha-beta T cell7.29e-158
T cell5.60e-1311
pro-T cell5.60e-1311
thymocyte7.10e-126
double negative thymocyte7.10e-126
naive T cell7.10e-126
double-positive, alpha-beta thymocyte7.10e-126
CD4-positive, alpha-beta thymocyte7.10e-126
naive thymus-derived CD4-positive, alpha-beta T cell7.10e-126
DN4 thymocyte7.10e-126
DN1 thymic pro-T cell7.10e-126
DN2 thymocyte7.10e-126
DN3 thymocyte7.10e-126
immature single positive thymocyte7.10e-126
early T lineage precursor7.10e-126
mature CD4 single-positive thymocyte7.10e-126
resting double-positive thymocyte7.10e-126
double-positive blast7.10e-126
CD69-positive double-positive thymocyte7.10e-126
CD69-positive, CD4-positive single-positive thymocyte7.10e-126
CD4-positive, CD8-intermediate double-positive thymocyte7.10e-126
CD24-positive, CD4 single-positive thymocyte7.10e-126
lymphoid lineage restricted progenitor cell1.02e-1112
lymphocyte1.19e-1013
common lymphoid progenitor1.19e-1013
hematopoietic lineage restricted progenitor cell3.17e-0825
leukocyte1.18e-0717
nongranular leukocyte1.18e-0717

Uber anatomy
Ontology termp-valuen
hemopoietic organ4.38e-3529
immune organ4.38e-3529
thymus2.73e-3023
neck2.73e-3023
respiratory system epithelium2.73e-3023
hemolymphoid system gland2.73e-3023
pharyngeal epithelium2.73e-3023
thymic region2.73e-3023
pharyngeal gland2.73e-3023
entire pharyngeal arch endoderm2.73e-3023
thymus primordium2.73e-3023
early pharyngeal endoderm2.73e-3023
pharynx9.04e-2924
gland of gut9.04e-2924
upper respiratory tract9.04e-2924
chordate pharynx9.04e-2924
pharyngeal arch system9.04e-2924
pharyngeal region of foregut9.04e-2924
mixed endoderm/mesoderm-derived structure8.55e-2835
hematopoietic system8.58e-2645
blood island8.58e-2645
hemolymphoid system1.14e-2548
immune system1.14e-2548
segment of respiratory tract6.85e-2527
craniocervical region3.68e-1736
respiratory tract5.62e-1641
respiratory system1.89e-1542
anterior region of body2.05e-1343
endocrine system8.89e-1272
lateral plate mesoderm1.99e-1087
gut epithelium2.92e-0955
foregut3.91e-0980
endocrine gland6.75e-0960
gland8.74e-0865
viscus2.28e-0719
endo-epithelium3.89e-0769
unilaminar epithelium7.78e-0766
subdivision of digestive tract8.59e-07114
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