FFCP PHASE1:Mm9::chr6:42660035..42660119,-: Difference between revisions
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{{FFCP|EntrezGene=77574|HGNC=|MCL_coexpression_id=1|UniProt=Q8BNE1|association_with_transcript=0bp_to_ENSMUST00000045054,ENSMUST00000151021,ENSMUST00000153952,ENSMUST00000165486,uc009brp.1,uc009brq.1,uc009brr.1,uc009bru.1_5end|description=CAGE_peak_1_at_Fam115a_5end|id=chr6:42660035..42660119,-|ontology_enrichment_celltype=CL:0000540!5.67e-15!33;CL:0000047!5.67e-15!33;CL:0000031!5.67e-15!33;CL:0000404!5.67e-15!33;CL:0000393!4.44e-14!39;CL:0000211!4.44e-14!39;CL:0000117!9.02e-13!23;CL:0000337!9.02e-13!23;CL:0002319!6.60e-12!43;CL:0000221!7.03e-12!44;CL:0000133!7.03e-12!44;CL:0000055!6.11e-11!50|ontology_enrichment_celltype_v019_2=CL:0000540,5.29e-15,33;CL:0000047,5.29e-15,33;CL:0000031,5.29e-15,33;CL:0000404,5.29e-15,33;CL:0000393,4.16e-14,39;CL:0000211,4.16e-14,39;CL:0000117,8.52e-13,23;CL:0000337,8.52e-13,23;CL:0002319,6.26e-12,43;CL:0000221,6.67e-12,44;CL:0000133,6.67e-12,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!5.54e-31!73;UBERON:0005743!5.54e-31!73;UBERON:0002346!6.03e-30!71;UBERON:0003075!6.03e-30!71;UBERON:0007284!6.03e-30!71;UBERON:0000073!9.15e-30!75;UBERON:0001016!9.15e-30!75;UBERON:0004121!3.80e-29!102;UBERON:0000924!3.80e-29!102;UBERON:0006601!3.80e-29!102;UBERON:0001049!1.51e-24!52;UBERON:0005068!1.51e-24!52;UBERON:0006241!1.51e-24!52;UBERON:0007135!1.51e-24!52;UBERON:0000033!1.83e-24!63;UBERON:0000955!8.02e-24!50;UBERON:0006238!8.02e-24!50;UBERON:0002616!4.19e-23!49;UBERON:0003056!1.25e-21!49;UBERON:0003080!1.57e-19!40;UBERON:0002780!8.11e-19!39;UBERON:0001890!8.11e-19!39;UBERON:0006240!8.11e-19!39;UBERON:0002020!2.26e-18!34;UBERON:0002791!1.05e-15!29;UBERON:0003528!1.05e-15!29;UBERON:0001893!1.05e-15!29;UBERON:0000956!3.34e-11!21;UBERON:0001869!3.34e-11!21;UBERON:0000203!3.34e-11!21;UBERON:0000468!3.45e-11!333;UBERON:0000153!9.42e-11!94;UBERON:0007811!6.39e-10!86;UBERON:0000025!1.77e-09!114;UBERON:0002619!2.75e-09!17;UBERON:0000922!8.92e-09!328;UBERON:0004111!1.23e-08!122;UBERON:0002021!1.17e-07!10;UBERON:0000411!1.17e-07!10;UBERON:0001950!1.17e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.75e-31,73;UBERON:0001016,7.91e-30,75;UBERON:0002346,2.11e-28,64;UBERON:0003075,2.11e-28,64;UBERON:0007284,2.11e-28,64;UBERON:0004121,3.70e-27,95;UBERON:0000924,3.70e-27,95;UBERON:0006601,3.70e-27,95;UBERON:0010314,3.82e-26,92;UBERON:0000073,4.55e-26,54;UBERON:0010371,1.13e-24,73;UBERON:0001049,1.34e-24,52;UBERON:0005068,1.34e-24,52;UBERON:0006241,1.34e-24,52;UBERON:0007135,1.34e-24,52;UBERON:0000955,7.02e-22,47;UBERON:0006238,7.02e-22,47;UBERON:0003056,1.13e-21,49;UBERON:0002616,3.56e-21,46;UBERON:0003080,1.43e-19,40;UBERON:0002780,7.42e-19,39;UBERON:0001890,7.42e-19,39;UBERON:0006240,7.42e-19,39;UBERON:0002020,2.07e-18,34;UBERON:0003528,9.79e-16,29;UBERON:0002791,9.79e-16,29;UBERON:0001893,9.79e-16,29;UBERON:0000956,3.18e-11,21;UBERON:0001869,3.18e-11,21;UBERON:0000203,3.18e-11,21;UBERON:0000025,2.28e-09,114;UBERON:0002619,2.64e-09,17;UBERON:0000922,4.89e-09,320;UBERON:0004111,1.56e-08,122;UBERON:0002021,1.13e-07,10;UBERON:0000411,1.13e-07,10;UBERON:0001950,1.13e-07,10|phase1_expression=44.5213794951327,0.348975407639361,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0.202475267389826,0,0,0,0,36.6536580551111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,42.1754340218184,42.6796880434156,29.7345738501924,21.9069576417451,26.5990690784145,16.2567775223509,39.4692695120795,39.4761708983522,37.3756667348926,0,0,0,31.3856511963855,32.951345592957,27.3306208907044,120.78292713318,132.77673579728,125.498617894223,24.3968063089775,32.014612660001,3.5995988691256,4.94433181283487,2.1314403448383,17.0772062995491,13.831858991576,80.2557599267617,81.4085808140095,78.6615355454169,84.5526913835259,89.8934961673067,106.444504517795,95.3662436631452,99.2756289538823,153.06107458915,162.162919368188,160.672433786031,127.138381371907,148.392957923108,130.749256009747,118.373591576586,135.625789017635,147.450309104622,152.61760727536,147.497061307871,137.935589910722,3.40767869999328,20.0264634282982,14.4932244350839,1.72084775396277,0,0.539703191637817,1.29955283489534,0.448026887097336,11.3759980306719,14.9978683868691,9.09251016110041,4.59341446863442,39.1544706979172,6.41632387071589,2.54805239706646,14.2213340630666,1.08245520505607,1.52015919285059,2.02209778005913,6.39429726426736,3.88406825470758,57.1502235399575,40.9425371168081,61.5020266190525,53.5027953634056,56.8224354883387,52.6797407967958,27.897983275188,2.22475470960936,13.4477401935518,1.76922110389975,31.5445357397448,10.6003928860989,13.5765070877862,3.72783522436244,129.994673873127,102.41943963178,3.0654846625031,0,0,0,195.027412505079,212.737780310661,155.183124859388,205.807995107655,185.90513747915,192.411729262153,171.326773799552,34.5235443452572,15.4264643556515,3.53811861807145,22.5172785798527,51.5276954132307,50.3485608709306,53.8385768117994,62.391794583986,53.0684693380357,60.3415622541642,54.7218071428816,67.7802831336221,37.7243987632474,53.517020687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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:77574 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BNE1 | |||
|association_with_transcript=0bp_to_ENSMUST00000045054,ENSMUST00000151021,ENSMUST00000153952,ENSMUST00000165486,uc009brp.1,uc009brq.1,uc009brr.1,uc009bru.1_5end | |||
|cluster_id=chr6:42660035..42660119,- | |||
|description=CAGE_peak_1_at_Fam115a_5end | |||
|id=chr6:42660035..42660119,- | |||
|ontology_enrichment_celltype=CL:0000540!5.67e-15!33;CL:0000047!5.67e-15!33;CL:0000031!5.67e-15!33;CL:0000404!5.67e-15!33;CL:0000393!4.44e-14!39;CL:0000211!4.44e-14!39;CL:0000117!9.02e-13!23;CL:0000337!9.02e-13!23;CL:0002319!6.60e-12!43;CL:0000221!7.03e-12!44;CL:0000133!7.03e-12!44;CL:0000055!6.11e-11!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,5.29e-15,33;CL:0000047,5.29e-15,33;CL:0000031,5.29e-15,33;CL:0000404,5.29e-15,33;CL:0000393,4.16e-14,39;CL:0000211,4.16e-14,39;CL:0000117,8.52e-13,23;CL:0000337,8.52e-13,23;CL:0002319,6.26e-12,43;CL:0000221,6.67e-12,44;CL:0000133,6.67e-12,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.54e-31!73;UBERON:0005743!5.54e-31!73;UBERON:0002346!6.03e-30!71;UBERON:0003075!6.03e-30!71;UBERON:0007284!6.03e-30!71;UBERON:0000073!9.15e-30!75;UBERON:0001016!9.15e-30!75;UBERON:0004121!3.80e-29!102;UBERON:0000924!3.80e-29!102;UBERON:0006601!3.80e-29!102;UBERON:0001049!1.51e-24!52;UBERON:0005068!1.51e-24!52;UBERON:0006241!1.51e-24!52;UBERON:0007135!1.51e-24!52;UBERON:0000033!1.83e-24!63;UBERON:0000955!8.02e-24!50;UBERON:0006238!8.02e-24!50;UBERON:0002616!4.19e-23!49;UBERON:0003056!1.25e-21!49;UBERON:0003080!1.57e-19!40;UBERON:0002780!8.11e-19!39;UBERON:0001890!8.11e-19!39;UBERON:0006240!8.11e-19!39;UBERON:0002020!2.26e-18!34;UBERON:0002791!1.05e-15!29;UBERON:0003528!1.05e-15!29;UBERON:0001893!1.05e-15!29;UBERON:0000956!3.34e-11!21;UBERON:0001869!3.34e-11!21;UBERON:0000203!3.34e-11!21;UBERON:0000468!3.45e-11!333;UBERON:0000153!9.42e-11!94;UBERON:0007811!6.39e-10!86;UBERON:0000025!1.77e-09!114;UBERON:0002619!2.75e-09!17;UBERON:0000922!8.92e-09!328;UBERON:0004111!1.23e-08!122;UBERON:0002021!1.17e-07!10;UBERON:0000411!1.17e-07!10;UBERON:0001950!1.17e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.75e-31,73;UBERON:0001016,7.91e-30,75;UBERON:0002346,2.11e-28,64;UBERON:0003075,2.11e-28,64;UBERON:0007284,2.11e-28,64;UBERON:0004121,3.70e-27,95;UBERON:0000924,3.70e-27,95;UBERON:0006601,3.70e-27,95;UBERON:0010314,3.82e-26,92;UBERON:0000073,4.55e-26,54;UBERON:0010371,1.13e-24,73;UBERON:0001049,1.34e-24,52;UBERON:0005068,1.34e-24,52;UBERON:0006241,1.34e-24,52;UBERON:0007135,1.34e-24,52;UBERON:0000955,7.02e-22,47;UBERON:0006238,7.02e-22,47;UBERON:0003056,1.13e-21,49;UBERON:0002616,3.56e-21,46;UBERON:0003080,1.43e-19,40;UBERON:0002780,7.42e-19,39;UBERON:0001890,7.42e-19,39;UBERON:0006240,7.42e-19,39;UBERON:0002020,2.07e-18,34;UBERON:0003528,9.79e-16,29;UBERON:0002791,9.79e-16,29;UBERON:0001893,9.79e-16,29;UBERON:0000956,3.18e-11,21;UBERON:0001869,3.18e-11,21;UBERON:0000203,3.18e-11,21;UBERON:0000025,2.28e-09,114;UBERON:0002619,2.64e-09,17;UBERON:0000922,4.89e-09,320;UBERON:0004111,1.56e-08,122;UBERON:0002021,1.13e-07,10;UBERON:0000411,1.13e-07,10;UBERON:0001950,1.13e-07,10 | |||
|phase1_expression=44.5213794951327,0.348975407639361,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0.202475267389826,0,0,0,0,36.6536580551111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,42.1754340218184,42.6796880434156,29.7345738501924,21.9069576417451,26.5990690784145,16.2567775223509,39.4692695120795,39.4761708983522,37.3756667348926,0,0,0,31.3856511963855,32.951345592957,27.3306208907044,120.78292713318,132.77673579728,125.498617894223,24.3968063089775,32.014612660001,3.5995988691256,4.94433181283487,2.1314403448383,17.0772062995491,13.831858991576,80.2557599267617,81.4085808140095,78.6615355454169,84.5526913835259,89.8934961673067,106.444504517795,95.3662436631452,99.2756289538823,153.06107458915,162.162919368188,160.672433786031,127.138381371907,148.392957923108,130.749256009747,118.373591576586,135.625789017635,147.450309104622,152.61760727536,147.497061307871,137.935589910722,3.40767869999328,20.0264634282982,14.4932244350839,1.72084775396277,0,0.539703191637817,1.29955283489534,0.448026887097336,11.3759980306719,14.9978683868691,9.09251016110041,4.59341446863442,39.1544706979172,6.41632387071589,2.54805239706646,14.2213340630666,1.08245520505607,1.52015919285059,2.02209778005913,6.39429726426736,3.88406825470758,57.1502235399575,40.9425371168081,61.5020266190525,53.5027953634056,56.8224354883387,52.6797407967958,27.897983275188,2.22475470960936,13.4477401935518,1.76922110389975,31.5445357397448,10.6003928860989,13.5765070877862,3.72783522436244,129.994673873127,102.41943963178,3.0654846625031,0,0,0,195.027412505079,212.737780310661,155.183124859388,205.807995107655,185.90513747915,192.411729262153,171.326773799552,34.5235443452572,15.4264643556515,3.53811861807145,22.5172785798527,51.5276954132307,50.3485608709306,53.8385768117994,62.391794583986,53.0684693380357,60.3415622541642,54.7218071428816,67.7802831336221,37.7243987632474,53.5170206874929,55.2486529874799,48.0038654016389,53.1070246020892,41.4420078161378,39.3043880539172,41.5981617650651,0,0,0,45.5676699578104,47.1397380562003,38.7133432141182,39.7731155783153,37.7787324955015,36.715572867196,26.7414036462969,28.16870714696,20.0836388871532,21.5573403386659,19.3717607613332,12.4035278605159,10.8187990694746,13.3925570327541,11.8101648509127,195.779942113202,135.21666066638,0.330418782983798,3.96675849995316,49.4828741241743,48.7697010906921,35.4385518635757,24.4037064794244,24.9063409106255,19.9736907418187,10.9141684155238,14.658206970437,13.8234364840148,13.7279965708394,13.4525220112193,6.29173586057955,7.78096979548899,7.16908583715722,27.881181440103,39.7584823881856,40.574784842309,37.6754956513831,32.3900653569935,23.3552280234761,26.2431629065668,8.41377843483732,10.9899109488962,9.62497878590044,1.77871576252289,7.67487486294033,8.05891879964132,2.69834534861824,3.85434230638156,3.13530307678142,4.32863948028414,3.45235364940973,2.59416362840057,2.74561413188081,5.75072826109418,5.20997326735905,5.61667811606209,3.03094653536534,2.51156378930677,1.4473305640901,15.1497615936616,43.0145504719,47.4228081446295,44.1337223015489,41.5401739470649,36.1813516074322,40.2293753097363,15.8058254764817,46.187097223114,36.9846031713454,30.6153155822375,19.1720078217413,19.1680329871144,16.9239398540369,0,0,7.86822836830458,8.00216564283724,165.367107687426,150.617017270981,28.0328756594115,13.3809591418318,62.4706274444188,61.2988828545722,99.7410331502859,44.9261340150798,40.7721573570781,41.0460969643807,62.3408480579337,67.2188473196017,65.2224833611764,185.081078258961,120.649072427028,41.845416861805,36.3237919358475,28.5398312742486,2.65490276679926,32.2898246086125,24.4882081141448,19.0491130553457,15.0603965369194,19.0609791725235,14.2135561242522,16.7225515559653,12.1209108650805,8.21695570633122,5.27093042874994,3.09406629744561,87.1525390729697,50.5971674227982,45.4048980077468,58.2996735285931,61.3597208402267,51.9053259222025,61.8704317463975,38.6670485375541,6.10146440965647,5.08396970073168,11.2469483008031,6.76033637060068,21.6362331772513,24.6076733706876,11.6984897123074,7.55048138827282,10.2018292820448,123.67867644101,2.22132145037209,26.2111322313293,16.2971184085346,3.95573759709851,1.6403307326523,2.74533807847827,0,0,0,7.63736494412091,57.4149828349761,52.6597419858538,41.7980668980371,40.7722177228214,41.4888871117737,34.5252726745141,27.3582938450862,11.5172614472973,9.20266310371729,2.4853572523477,6.20062232552609,54.4240227600083,48.3138792134725,54.8352351130214,48.6932534511046,55.2486530354845,41.7791769578884,26.9523076626977,16.1483390415595,7.24752362478018,9.79302021276743,0.316011120628178,17.0289180843738,13.8659792172517,5.58659538804519,6.44496104402933,5.36439657909415,2.64429988943931,1.18151621739662,2.01932899896295,1.143102099825,0.403304740547362,0.779663045918019,0.288635524920988,0.233753804363138,6.80191150845634,4.88369097422942,0.717710852875806,2.3503846290971,32.6490413914402,16.3283753642528,16.4836461840539,8.36036678408357,9.02829787263654,217.429459407571,185.511070312392,1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| |||
|short_description=p1@Fam115a | |||
}} |
Revision as of 18:50, 5 August 2015
Short description: | p1@Fam115a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Fam115a_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000045054, ENSMUST00000151021, ENSMUST00000153952, ENSMUST00000165486, uc009brp.1, uc009brq.1, uc009brr.1, uc009bru.1_5end |
EntrezGene: | 77574 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 5.29e-15 | 33 |
neuronal stem cell | 5.29e-15 | 33 |
neuroblast | 5.29e-15 | 33 |
electrically signaling cell | 5.29e-15 | 33 |
electrically responsive cell | 4.16e-14 | 39 |
electrically active cell | 4.16e-14 | 39 |
CNS neuron (sensu Vertebrata) | 8.52e-13 | 23 |
neuroblast (sensu Vertebrata) | 8.52e-13 | 23 |
neural cell | 6.26e-12 | 43 |
ectodermal cell | 6.67e-12 | 44 |
neurectodermal cell | 6.67e-12 | 44 |