FFCP PHASE1:Mm9::chr16:20621328..20621377,-: Difference between revisions
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{{FFCP|EntrezGene=73047|HGNC=|MCL_coexpression_id=1|UniProt=Q78WH7,B2RXL5|association_with_transcript=0bp_to_ENSMUST00000052939,NM_028420,uc007yqk.2_5end|description=CAGE_peak_1_at_Camk2n2_5end|id=chr16:20621328..20621377,-|ontology_enrichment_celltype=CL:0000117!1.89e-13!23;CL:0000337!1.89e-13!23;CL:0002319!4.79e-13!43;CL:0000221!5.77e-13!44;CL:0000133!5.77e-13!44;CL:0000540!4.55e-11!33;CL:0000047!4.55e-11!33;CL:0000031!4.55e-11!33;CL:0000404!4.55e-11!33;CL:0000055!8.67e-11!50;CL:0000393!1.65e-09!39;CL:0000211!1.65e-09!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.16e-15,23;CL:0000337,1.16e-15,23;CL:0002319,2.52e-14,43;CL:0000221,3.07e-14,44;CL:0000133,3.07e-14,44;CL:0000540,5.84e-12,33;CL:0000047,5.84e-12,33;CL:0000031,5.84e-12,33;CL:0000404,5.84e-12,33;CL:0000393,3.23e-09,39;CL:0000211,3.23e-09,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!4.57e-29!75;UBERON:0001016!4.57e-29!75;UBERON:0001017!5.70e-29!73;UBERON:0005743!5.70e-29!73;UBERON:0004121!6.50e-27!102;UBERON:0000924!6.50e-27!102;UBERON:0006601!6.50e-27!102;UBERON:0002346!8.18e-27!71;UBERON:0003075!8.18e-27!71;UBERON:0007284!8.18e-27!71;UBERON:0001049!2.11e-25!52;UBERON:0005068!2.11e-25!52;UBERON:0006241!2.11e-25!52;UBERON:0007135!2.11e-25!52;UBERON:0000955!5.26e-24!50;UBERON:0006238!5.26e-24!50;UBERON:0000033!1.14e-23!63;UBERON:0002616!1.94e-23!49;UBERON:0002020!5.12e-19!34;UBERON:0003056!1.09e-18!49;UBERON:0003080!3.46e-18!40;UBERON:0002780!1.81e-17!39;UBERON:0001890!1.81e-17!39;UBERON:0006240!1.81e-17!39;UBERON:0002791!8.16e-16!29;UBERON:0003528!8.16e-16!29;UBERON:0001893!8.16e-16!29;UBERON:0000956!2.95e-11!21;UBERON:0001869!2.95e-11!21;UBERON:0000203!2.95e-11!21;UBERON:0007811!1.11e-10!86;UBERON:0002619!1.46e-09!17;UBERON:0000153!5.69e-08!94;UBERON:0003076!8.39e-08!12;UBERON:0003057!8.39e-08!12;UBERON:0002021!3.55e-07!10;UBERON:0000411!3.55e-07!10;UBERON:0001950!3.55e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.74e-31,75;UBERON:0001017,2.39e-31,73;UBERON:0000073,9.20e-30,54;UBERON:0001049,4.91e-28,52;UBERON:0005068,4.91e-28,52;UBERON:0006241,4.91e-28,52;UBERON:0007135,4.91e-28,52;UBERON:0002346,2.25e-27,64;UBERON:0003075,2.25e-27,64;UBERON:0007284,2.25e-27,64;UBERON:0004121,3.12e-26,95;UBERON:0000924,3.12e-26,95;UBERON:0006601,3.12e-26,95;UBERON:0000955,7.78e-24,47;UBERON:0006238,7.78e-24,47;UBERON:0002616,3.48e-23,46;UBERON:0002020,2.87e-22,34;UBERON:0010371,6.12e-22,73;UBERON:0003056,5.65e-20,49;UBERON:0003080,1.36e-19,40;UBERON:0002780,9.31e-19,39;UBERON:0001890,9.31e-19,39;UBERON:0006240,9.31e-19,39;UBERON:0003528,1.82e-18,29;UBERON:0002791,1.82e-18,29;UBERON:0001893,1.82e-18,29;UBERON:0010314,4.22e-18,92;UBERON:0000956,4.66e-13,21;UBERON:0001869,4.66e-13,21;UBERON:0000203,4.66e-13,21;UBERON:0002619,4.76e-11,17;UBERON:0003076,5.76e-09,12;UBERON:0003057,5.76e-09,12;UBERON:0002021,3.17e-08,10;UBERON:0000411,3.17e-08,10;UBERON:0001950,3.17e-08,10|phase1_expression=1.60148847104794,0.348975407639361,0.909998478779072,0,0,1.34303417529512,0.467225281191051,0.129123323441576,0.563154888606667,0.468129052643987,0,0.0797721589953364,0,0,0,0,0,0,0.274228867211478,0,14.1171861650776,0.397163804803541,0.522399578277871,0.47997726838022,0,0.57423196411502,0,1.29282739611533,0.190023419456374,0.504060259519861,0.221730510655305,0,0,0,0,0.166234645358492,0,0.837063261473815,0,0,0.588231488031014,0,0.485510353031154,0.629484089877886,0.608261587317087,0.734187008646726,10.9534788208725,2.18025156380447,6.59058548203415,3.69416808241138,1.67983705950435,5.75010257459886,0,0,0,1.28629718017973,0.286533439938757,1.03134418455488,27.7173551377649,30.1524858185059,29.1562445612842,1.69422266034566,0.889294796111139,0,1.97773272513395,0,3.59520132622086,7.68436610643109,6.0139975138917,9.18040380655497,8.2026734927039,102.834354385369,90.1143647082583,10.9016811301309,8.72193786265951,5.51531271966013,106.812404569407,106.491239963047,108.75342554542,30.0700736024842,32.2951381916506,29.1711487511786,117.815225578583,96.2324063154173,84.0390362772456,73.3625177829433,71.4705837611497,36.1614924901083,1.4387976733305,2.87171928405785,1.15945795480671,0,0,0.539703191637817,0,0.896053774194671,4.0728881838208,6.47635225796619,5.97507810586598,3.88673531961374,1.26759077799012,10.2661181931454,0,7.11066703153331,0.432982082022428,0.253359865475099,0,2.51204535381932,0,14.2504453502232,1.90833859442749,4.26251669636998,4.38169444786511,2.56228488939458,5.64425794251383,1.88499886994513,2.22475470960936,0.433798070759735,0,0.485300549842228,0.441683036920787,0,0,28.1069565131085,46.7066156194005,1.02182822083437,0,0.599902730993408,0.127070227073065,121.629999196716,38.4300506367646,27.5183031127173,62.7505795894118,62.1388561312703,99.1148972549102,66.1944353316451,0.305518091550949,0.622034853050465,0.252722758433675,4.41927897361595,0.520481771850815,1.37941262660084,1.80062129805349,2.26057226753573,3.06164246180975,4.22775276940004,3.27956035959051,8.53721123438752,0.4311359858656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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:73047 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q78WH7,uniprot:B2RXL5 | |||
|association_with_transcript=0bp_to_ENSMUST00000052939,NM_028420,uc007yqk.2_5end | |||
|cluster_id=chr16:20621328..20621377,- | |||
|description=CAGE_peak_1_at_Camk2n2_5end | |||
|id=chr16:20621328..20621377,- | |||
|ontology_enrichment_celltype=CL:0000117!1.89e-13!23;CL:0000337!1.89e-13!23;CL:0002319!4.79e-13!43;CL:0000221!5.77e-13!44;CL:0000133!5.77e-13!44;CL:0000540!4.55e-11!33;CL:0000047!4.55e-11!33;CL:0000031!4.55e-11!33;CL:0000404!4.55e-11!33;CL:0000055!8.67e-11!50;CL:0000393!1.65e-09!39;CL:0000211!1.65e-09!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.16e-15,23;CL:0000337,1.16e-15,23;CL:0002319,2.52e-14,43;CL:0000221,3.07e-14,44;CL:0000133,3.07e-14,44;CL:0000540,5.84e-12,33;CL:0000047,5.84e-12,33;CL:0000031,5.84e-12,33;CL:0000404,5.84e-12,33;CL:0000393,3.23e-09,39;CL:0000211,3.23e-09,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.57e-29!75;UBERON:0001016!4.57e-29!75;UBERON:0001017!5.70e-29!73;UBERON:0005743!5.70e-29!73;UBERON:0004121!6.50e-27!102;UBERON:0000924!6.50e-27!102;UBERON:0006601!6.50e-27!102;UBERON:0002346!8.18e-27!71;UBERON:0003075!8.18e-27!71;UBERON:0007284!8.18e-27!71;UBERON:0001049!2.11e-25!52;UBERON:0005068!2.11e-25!52;UBERON:0006241!2.11e-25!52;UBERON:0007135!2.11e-25!52;UBERON:0000955!5.26e-24!50;UBERON:0006238!5.26e-24!50;UBERON:0000033!1.14e-23!63;UBERON:0002616!1.94e-23!49;UBERON:0002020!5.12e-19!34;UBERON:0003056!1.09e-18!49;UBERON:0003080!3.46e-18!40;UBERON:0002780!1.81e-17!39;UBERON:0001890!1.81e-17!39;UBERON:0006240!1.81e-17!39;UBERON:0002791!8.16e-16!29;UBERON:0003528!8.16e-16!29;UBERON:0001893!8.16e-16!29;UBERON:0000956!2.95e-11!21;UBERON:0001869!2.95e-11!21;UBERON:0000203!2.95e-11!21;UBERON:0007811!1.11e-10!86;UBERON:0002619!1.46e-09!17;UBERON:0000153!5.69e-08!94;UBERON:0003076!8.39e-08!12;UBERON:0003057!8.39e-08!12;UBERON:0002021!3.55e-07!10;UBERON:0000411!3.55e-07!10;UBERON:0001950!3.55e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.74e-31,75;UBERON:0001017,2.39e-31,73;UBERON:0000073,9.20e-30,54;UBERON:0001049,4.91e-28,52;UBERON:0005068,4.91e-28,52;UBERON:0006241,4.91e-28,52;UBERON:0007135,4.91e-28,52;UBERON:0002346,2.25e-27,64;UBERON:0003075,2.25e-27,64;UBERON:0007284,2.25e-27,64;UBERON:0004121,3.12e-26,95;UBERON:0000924,3.12e-26,95;UBERON:0006601,3.12e-26,95;UBERON:0000955,7.78e-24,47;UBERON:0006238,7.78e-24,47;UBERON:0002616,3.48e-23,46;UBERON:0002020,2.87e-22,34;UBERON:0010371,6.12e-22,73;UBERON:0003056,5.65e-20,49;UBERON:0003080,1.36e-19,40;UBERON:0002780,9.31e-19,39;UBERON:0001890,9.31e-19,39;UBERON:0006240,9.31e-19,39;UBERON:0003528,1.82e-18,29;UBERON:0002791,1.82e-18,29;UBERON:0001893,1.82e-18,29;UBERON:0010314,4.22e-18,92;UBERON:0000956,4.66e-13,21;UBERON:0001869,4.66e-13,21;UBERON:0000203,4.66e-13,21;UBERON:0002619,4.76e-11,17;UBERON:0003076,5.76e-09,12;UBERON:0003057,5.76e-09,12;UBERON:0002021,3.17e-08,10;UBERON:0000411,3.17e-08,10;UBERON:0001950,3.17e-08,10 | |||
|phase1_expression=1.60148847104794,0.348975407639361,0.909998478779072,0,0,1.34303417529512,0.467225281191051,0.129123323441576,0.563154888606667,0.468129052643987,0,0.0797721589953364,0,0,0,0,0,0,0.274228867211478,0,14.1171861650776,0.397163804803541,0.522399578277871,0.47997726838022,0,0.57423196411502,0,1.29282739611533,0.190023419456374,0.504060259519861,0.221730510655305,0,0,0,0,0.166234645358492,0,0.837063261473815,0,0,0.588231488031014,0,0.485510353031154,0.629484089877886,0.608261587317087,0.734187008646726,10.9534788208725,2.18025156380447,6.59058548203415,3.69416808241138,1.67983705950435,5.75010257459886,0,0,0,1.28629718017973,0.286533439938757,1.03134418455488,27.7173551377649,30.1524858185059,29.1562445612842,1.69422266034566,0.889294796111139,0,1.97773272513395,0,3.59520132622086,7.68436610643109,6.0139975138917,9.18040380655497,8.2026734927039,102.834354385369,90.1143647082583,10.9016811301309,8.72193786265951,5.51531271966013,106.812404569407,106.491239963047,108.75342554542,30.0700736024842,32.2951381916506,29.1711487511786,117.815225578583,96.2324063154173,84.0390362772456,73.3625177829433,71.4705837611497,36.1614924901083,1.4387976733305,2.87171928405785,1.15945795480671,0,0,0.539703191637817,0,0.896053774194671,4.0728881838208,6.47635225796619,5.97507810586598,3.88673531961374,1.26759077799012,10.2661181931454,0,7.11066703153331,0.432982082022428,0.253359865475099,0,2.51204535381932,0,14.2504453502232,1.90833859442749,4.26251669636998,4.38169444786511,2.56228488939458,5.64425794251383,1.88499886994513,2.22475470960936,0.433798070759735,0,0.485300549842228,0.441683036920787,0,0,28.1069565131085,46.7066156194005,1.02182822083437,0,0.599902730993408,0.127070227073065,121.629999196716,38.4300506367646,27.5183031127173,62.7505795894118,62.1388561312703,99.1148972549102,66.1944353316451,0.305518091550949,0.622034853050465,0.252722758433675,4.41927897361595,0.520481771850815,1.37941262660084,1.80062129805349,2.26057226753573,3.06164246180975,4.22775276940004,3.27956035959051,8.53721123438752,0.431135985865684,0,0.351902248327898,0.219195732427575,0,0.696504333044333,0.205782136407943,0.199034266818493,0,0.51469581422943,0,0.621377317606506,0,0,0.946978942340841,0.196764231747404,0.154267112887378,0.697601834251224,0.536546802799238,0,0.16455984991348,0.164167464079095,0.243206428637567,0.438599962275997,0.439100230582101,0.671032093801859,30.9126224389267,20.1693040263397,0.991256348951394,0.528901133327089,0.426576501070468,0.696710015581316,0.902072229254653,0.403367049246685,0.667134131534611,0.951128130562796,0.474529061544512,1.31759163779209,2.01068167040216,1.59165177632921,1.9496408711912,0.898819408654221,0.648414149624083,1.39398891278057,0.379335801906163,0.456994050438915,0,0,0,0.350679099451593,0.126473074248515,0.147610147979602,0.156998727841375,0.987177311374404,0.592905254174298,0,0.589676985339609,0.449724224769707,0,0,0,0,0.162135226775035,0.549122826376163,0,0.744281895337007,0,0.757736633841335,0.179397413521912,3.37710464954357,0.739012760666419,0.189491411770485,0.325929952884052,0.848725428875941,0.469380496577004,0.167506257441816,0.238043640886014,0.780534591431195,0,0.221464689648775,0.478364305972461,0.491589944147214,0.518054945597687,0.433947175744535,0,0,0,0,131.169832020026,110.178985396671,4.75411341592359,0.504941854408746,1.57754109708128,0.390438744296638,1.29254038639679,0.477937595905104,1.33679204449436,1.13230612315533,0.809621403349789,3.50707029493574,1.18586333383957,29.5615611108062,0.567760340833074,0.35613120733451,0.488660878060728,0.494910368917606,3.98235415019888,1.45668381692989,1.81394134178851,1.32023555829129,2.65771703592696,1.84461088766356,5.68542244970086,3.27180356529755,1.06949213515416,1.58018378967908,2.10837217149998,0,19.7454971337197,0.720244376125241,0.905510786479282,0.643011105094777,2.48276327099183,5.52943334566419,5.43011767986999,23.4438010818241,1.17335854031855,1.0591603543191,1.7642271844397,0.32977250588296,0.807322133479528,0.361877549568935,0,0.328281799490123,1.1659233465194,140.552378923966,0.170870880797853,0.206386867963223,0.370389054739423,0.188368457004691,0.27338845544205,0,0,0,0,3.81868247206045,0.158167996790568,0.609958401380546,0.756037385752609,1.67270636811575,1.09181281873089,1.48350781023303,1.23980183588004,1.04702376793612,1.03691978633434,0.621339313086926,1.69107881605257,0.299033092087958,0,0.777804753376191,0.387479470433193,0,0.117357238645754,0.13020438484395,0.419437377702843,0.241584120826006,0.288030006257865,0.316011120628178,0,0,0.129920822977795,0.179026695667481,0.198681354781265,0.120195449519969,0,0.100966449948148,0,0.201652370273681,0.0974578807397524,0.0962118416403295,0.116876902181569,0.680191150845634,0.221985953374065,0.358855426437903,0.335769232728157,0.965947970160952,0.750729901804728,0.549454872801795,1.2862102744744,3.00943262421218,76.8062505959211,69.9694359490909,53.2792827498639,60.1486138202907,54.8066015816514,47.5898155355511,56.7018900194717,72.0513925158753,67.51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| |||
|short_description=p1@Camk2n2 | |||
}} |
Revision as of 04:04, 6 August 2015
Short description: | p1@Camk2n2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Camk2n2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000052939, NM_028420, uc007yqk.2_5end |
EntrezGene: | 73047 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.16e-15 | 23 |
neuroblast (sensu Vertebrata) | 1.16e-15 | 23 |
neural cell | 2.52e-14 | 43 |
ectodermal cell | 3.07e-14 | 44 |
neurectodermal cell | 3.07e-14 | 44 |
neuron | 5.84e-12 | 33 |
neuronal stem cell | 5.84e-12 | 33 |
neuroblast | 5.84e-12 | 33 |
electrically signaling cell | 5.84e-12 | 33 |
electrically responsive cell | 3.23e-09 | 39 |
electrically active cell | 3.23e-09 | 39 |