FFCP PHASE1:Mm9::chr13:64471653..64471670,-: Difference between revisions
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{{FFCP|EntrezGene=13039|HGNC=|MCL_coexpression_id=1|UniProt=P06797,E9Q6H1,Q543M3|association_with_transcript=-39bp_to_ENSMUST00000021933,ENSMUST00000164350,NM_009984,uc007qyw.1_5end|description=CAGE_peak_2_at_Ctsl_5end|id=chr13:64471653..64471670,-|ontology_enrichment_celltype=CL:0000393!9.82e-13!39;CL:0000211!9.82e-13!39;CL:0000055!4.25e-11!50;CL:0000540!6.01e-10!33;CL:0000047!6.01e-10!33;CL:0000031!6.01e-10!33;CL:0000404!6.01e-10!33;CL:0000117!1.46e-09!23;CL:0000337!1.46e-09!23;CL:0000221!2.26e-09!44;CL:0000133!2.26e-09!44;CL:0002319!5.77e-09!43|ontology_enrichment_celltype_v019_2=CL:0000393,8.04e-13,39;CL:0000211,8.04e-13,39;CL:0000540,5.17e-10,33;CL:0000047,5.17e-10,33;CL:0000031,5.17e-10,33;CL:0000404,5.17e-10,33;CL:0000117,1.27e-09,23;CL:0000337,1.27e-09,23;CL:0000221,1.96e-09,44;CL:0000133,1.96e-09,44;CL:0002319,5.06e-09,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.23e-24!75;UBERON:0001016!1.23e-24!75;UBERON:0001017!1.09e-23!73;UBERON:0005743!1.09e-23!73;UBERON:0004121!1.42e-21!102;UBERON:0000924!1.42e-21!102;UBERON:0006601!1.42e-21!102;UBERON:0002346!1.49e-21!71;UBERON:0003075!1.49e-21!71;UBERON:0007284!1.49e-21!71;UBERON:0001049!1.44e-20!52;UBERON:0005068!1.44e-20!52;UBERON:0006241!1.44e-20!52;UBERON:0007135!1.44e-20!52;UBERON:0000033!7.03e-20!63;UBERON:0000955!2.00e-19!50;UBERON:0006238!2.00e-19!50;UBERON:0002616!7.19e-19!49;UBERON:0003056!3.22e-17!49;UBERON:0003080!2.15e-16!40;UBERON:0002780!7.49e-16!39;UBERON:0001890!7.49e-16!39;UBERON:0006240!7.49e-16!39;UBERON:0002020!7.80e-16!34;UBERON:0002791!3.92e-13!29;UBERON:0003528!3.92e-13!29;UBERON:0001893!3.92e-13!29;UBERON:0000025!1.30e-11!114;UBERON:0004111!1.96e-11!122;UBERON:0007811!2.40e-09!86;UBERON:0000956!5.25e-09!21;UBERON:0001869!5.25e-09!21;UBERON:0000203!5.25e-09!21;UBERON:0000153!6.97e-09!94;UBERON:0002619!3.15e-08!17;UBERON:0002021!4.61e-08!10;UBERON:0000411!4.61e-08!10;UBERON:0001950!4.61e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0001016,8.11e-25,75;UBERON:0001017,7.37e-24,73;UBERON:0002346,4.08e-22,64;UBERON:0003075,4.08e-22,64;UBERON:0007284,4.08e-22,64;UBERON:0000073,6.69e-22,54;UBERON:0004121,3.90e-21,95;UBERON:0000924,3.90e-21,95;UBERON:0006601,3.90e-21,95;UBERON:0010314,5.38e-21,92;UBERON:0001049,1.03e-20,52;UBERON:0005068,1.03e-20,52;UBERON:0006241,1.03e-20,52;UBERON:0007135,1.03e-20,52;UBERON:0010371,2.12e-18,73;UBERON:0000955,6.56e-18,47;UBERON:0006238,6.56e-18,47;UBERON:0002616,2.32e-17,46;UBERON:0003056,2.44e-17,49;UBERON:0003080,1.65e-16,40;UBERON:0002780,5.81e-16,39;UBERON:0001890,5.81e-16,39;UBERON:0006240,5.81e-16,39;UBERON:0002020,6.05e-16,34;UBERON:0003528,3.19e-13,29;UBERON:0002791,3.19e-13,29;UBERON:0001893,3.19e-13,29;UBERON:0000025,3.13e-11,114;UBERON:0004111,5.60e-11,122;UBERON:0000956,4.60e-09,21;UBERON:0001869,4.60e-09,21;UBERON:0000203,4.60e-09,21;UBERON:0002619,2.79e-08,17;UBERON:0002021,4.10e-08,10;UBERON:0000411,4.10e-08,10;UBERON:0001950,4.10e-08,10|phase1_expression=10.4096750618116,0.348975407639361,0,0.30246421130683,0,0.16787927191189,0.233612640595526,2.06597317506522,0.985521055061667,1.87251621057595,0,0.957265907944037,0.856003649656029,1.48614684112296,0.666219523631325,0.202475267389826,0,0.157731082679119,0.274228867211478,0,5.78294373027274,1.68794617041505,1.30599894569468,0.159992422793407,0,0,0,0.861884930743556,0.380046838912748,0,0,0,0,0,0.288851619751275,0,0.204169356262369,1.67412652294763,0,0.523523743973798,0,0,0.485510353031154,11.0789199818508,9.0225468785368,6.60768307782054,2.34717403304412,1.74420125104357,2.41654801007919,4.08302788055995,5.03951117851305,2.87505128729943,1.00669563634642,0.725362142011344,1.00828139742739,6.94600477297057,14.0401385569991,6.18806510732931,4.24864567805155,11.1088105647127,5.70448263155561,2.71075625655306,2.66788438833342,3.5995988691256,2.96659908770092,2.1314403448383,2.09720077362883,1.53687322128622,4.35496371695606,3.51015439662396,3.99617426567626,9.99778445413313,12.3686382932904,5.14461356702807,3.64212789869298,2.75765635983006,6.60695285996332,12.3856717942632,9.98442466165583,6.98997324970027,8.41686321142169,9.89735404057844,10.3297709630511,15.1945904708554,15.7382195210114,7.36571463684169,11.10499110233,8.20157561631323,5.30083353332288,9.29530189313462,1.73918693221007,1.72084775396277,2.719885334831,0.539703191637817,0,0.896053774194671,2.38755514223978,4.94247935476367,3.37721805983729,5.65343319216544,8.02807492727079,7.69958864485907,2.54805239706646,0,3.68034769719064,2.78695852022608,2.02209778005913,1.59857431606684,0,4.15637989381509,3.46970653532272,2.74018930480927,2.53677046981664,3.61734337326294,3.76283862834255,2.63899841792318,5.43828929015623,3.61498392299779,2.65383165584962,2.58826959915855,1.32504911076236,1.45462575940567,1.86391761218122,8.78342391034641,9.00620839297857,0.510914110417183,0.359445373517761,0,0.508280908292259,9.43681028250383,10.5225138648284,6.15706325353036,15.8180131374972,21.7358138730781,10.8049783170971,9.89671704713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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:13039 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P06797,uniprot:E9Q6H1,uniprot:Q543M3 | |||
|association_with_transcript=-39bp_to_ENSMUST00000021933,ENSMUST00000164350,NM_009984,uc007qyw.1_5end | |||
|cluster_id=chr13:64471653..64471670,- | |||
|description=CAGE_peak_2_at_Ctsl_5end | |||
|id=chr13:64471653..64471670,- | |||
|ontology_enrichment_celltype=CL:0000393!9.82e-13!39;CL:0000211!9.82e-13!39;CL:0000055!4.25e-11!50;CL:0000540!6.01e-10!33;CL:0000047!6.01e-10!33;CL:0000031!6.01e-10!33;CL:0000404!6.01e-10!33;CL:0000117!1.46e-09!23;CL:0000337!1.46e-09!23;CL:0000221!2.26e-09!44;CL:0000133!2.26e-09!44;CL:0002319!5.77e-09!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,8.04e-13,39;CL:0000211,8.04e-13,39;CL:0000540,5.17e-10,33;CL:0000047,5.17e-10,33;CL:0000031,5.17e-10,33;CL:0000404,5.17e-10,33;CL:0000117,1.27e-09,23;CL:0000337,1.27e-09,23;CL:0000221,1.96e-09,44;CL:0000133,1.96e-09,44;CL:0002319,5.06e-09,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.23e-24!75;UBERON:0001016!1.23e-24!75;UBERON:0001017!1.09e-23!73;UBERON:0005743!1.09e-23!73;UBERON:0004121!1.42e-21!102;UBERON:0000924!1.42e-21!102;UBERON:0006601!1.42e-21!102;UBERON:0002346!1.49e-21!71;UBERON:0003075!1.49e-21!71;UBERON:0007284!1.49e-21!71;UBERON:0001049!1.44e-20!52;UBERON:0005068!1.44e-20!52;UBERON:0006241!1.44e-20!52;UBERON:0007135!1.44e-20!52;UBERON:0000033!7.03e-20!63;UBERON:0000955!2.00e-19!50;UBERON:0006238!2.00e-19!50;UBERON:0002616!7.19e-19!49;UBERON:0003056!3.22e-17!49;UBERON:0003080!2.15e-16!40;UBERON:0002780!7.49e-16!39;UBERON:0001890!7.49e-16!39;UBERON:0006240!7.49e-16!39;UBERON:0002020!7.80e-16!34;UBERON:0002791!3.92e-13!29;UBERON:0003528!3.92e-13!29;UBERON:0001893!3.92e-13!29;UBERON:0000025!1.30e-11!114;UBERON:0004111!1.96e-11!122;UBERON:0007811!2.40e-09!86;UBERON:0000956!5.25e-09!21;UBERON:0001869!5.25e-09!21;UBERON:0000203!5.25e-09!21;UBERON:0000153!6.97e-09!94;UBERON:0002619!3.15e-08!17;UBERON:0002021!4.61e-08!10;UBERON:0000411!4.61e-08!10;UBERON:0001950!4.61e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,8.11e-25,75;UBERON:0001017,7.37e-24,73;UBERON:0002346,4.08e-22,64;UBERON:0003075,4.08e-22,64;UBERON:0007284,4.08e-22,64;UBERON:0000073,6.69e-22,54;UBERON:0004121,3.90e-21,95;UBERON:0000924,3.90e-21,95;UBERON:0006601,3.90e-21,95;UBERON:0010314,5.38e-21,92;UBERON:0001049,1.03e-20,52;UBERON:0005068,1.03e-20,52;UBERON:0006241,1.03e-20,52;UBERON:0007135,1.03e-20,52;UBERON:0010371,2.12e-18,73;UBERON:0000955,6.56e-18,47;UBERON:0006238,6.56e-18,47;UBERON:0002616,2.32e-17,46;UBERON:0003056,2.44e-17,49;UBERON:0003080,1.65e-16,40;UBERON:0002780,5.81e-16,39;UBERON:0001890,5.81e-16,39;UBERON:0006240,5.81e-16,39;UBERON:0002020,6.05e-16,34;UBERON:0003528,3.19e-13,29;UBERON:0002791,3.19e-13,29;UBERON:0001893,3.19e-13,29;UBERON:0000025,3.13e-11,114;UBERON:0004111,5.60e-11,122;UBERON:0000956,4.60e-09,21;UBERON:0001869,4.60e-09,21;UBERON:0000203,4.60e-09,21;UBERON:0002619,2.79e-08,17;UBERON:0002021,4.10e-08,10;UBERON:0000411,4.10e-08,10;UBERON:0001950,4.10e-08,10 | |||
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| |||
|short_description=p2@Ctsl | |||
}} |
Revision as of 06:36, 6 August 2015
Short description: | p2@Ctsl |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ctsl_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -39bp_to_ENSMUST00000021933, ENSMUST00000164350, NM_009984, uc007qyw.1_5end |
EntrezGene: | 13039 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 8.04e-13 | 39 |
electrically active cell | 8.04e-13 | 39 |
neuron | 5.17e-10 | 33 |
neuronal stem cell | 5.17e-10 | 33 |
neuroblast | 5.17e-10 | 33 |
electrically signaling cell | 5.17e-10 | 33 |
CNS neuron (sensu Vertebrata) | 1.27e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.27e-09 | 23 |
ectodermal cell | 1.96e-09 | 44 |
neurectodermal cell | 1.96e-09 | 44 |
neural cell | 5.06e-09 | 43 |