FFCP PHASE1:Mm9::chr6:91106709..91106732,+: Difference between revisions
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{{FFCP|EntrezGene=232232|HGNC=|MCL_coexpression_id=1|UniProt=Q91WA3|association_with_transcript=50bp_to_ENSMUST00000041736_5end|description=CAGE_peak_2_at_Hdac11_5end|id=chr6:91106709..91106732,+|ontology_enrichment_celltype=CL:0000117!9.33e-13!23;CL:0000337!9.33e-13!23;CL:0000540!2.16e-11!33;CL:0000047!2.16e-11!33;CL:0000031!2.16e-11!33;CL:0000404!2.16e-11!33;CL:0000221!5.66e-08!44;CL:0000133!5.66e-08!44;CL:0002319!1.01e-07!43;CL:0000393!8.60e-07!39;CL:0000211!8.60e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,3.52e-13,23;CL:0000337,3.52e-13,23;CL:0000540,1.04e-11,33;CL:0000047,1.04e-11,33;CL:0000031,1.04e-11,33;CL:0000404,1.04e-11,33;CL:0000221,5.28e-08,44;CL:0000133,5.28e-08,44;CL:0002319,9.56e-08,43;CL:0000393,2.44e-07,39;CL:0000211,2.44e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!6.79e-26!73;UBERON:0005743!6.79e-26!73;UBERON:0000033!6.18e-24!63;UBERON:0000073!7.22e-24!75;UBERON:0001016!7.22e-24!75;UBERON:0001049!3.00e-23!52;UBERON:0005068!3.00e-23!52;UBERON:0006241!3.00e-23!52;UBERON:0007135!3.00e-23!52;UBERON:0000955!3.19e-22!50;UBERON:0006238!3.19e-22!50;UBERON:0002346!4.45e-22!71;UBERON:0003075!4.45e-22!71;UBERON:0007284!4.45e-22!71;UBERON:0002616!1.20e-21!49;UBERON:0003056!2.10e-20!49;UBERON:0004121!3.76e-19!102;UBERON:0000924!3.76e-19!102;UBERON:0006601!3.76e-19!102;UBERON:0003080!3.00e-18!40;UBERON:0002780!1.59e-17!39;UBERON:0001890!1.59e-17!39;UBERON:0006240!1.59e-17!39;UBERON:0002020!8.63e-16!34;UBERON:0002791!5.93e-13!29;UBERON:0003528!5.93e-13!29;UBERON:0001893!5.93e-13!29;UBERON:0000025!2.76e-11!114;UBERON:0004111!7.22e-11!122;UBERON:0007811!1.33e-10!86;UBERON:0000153!1.47e-10!94;UBERON:0000956!1.22e-08!21;UBERON:0001869!1.22e-08!21;UBERON:0000203!1.22e-08!21;UBERON:0002619!1.61e-07!17;UBERON:0000468!1.90e-07!333;UBERON:0002021!5.98e-07!10;UBERON:0000411!5.98e-07!10;UBERON:0001950!5.98e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.42e-26,64;UBERON:0003075,2.42e-26,64;UBERON:0007284,2.42e-26,64;UBERON:0001017,3.00e-26,73;UBERON:0000073,4.45e-25,54;UBERON:0001016,2.13e-24,75;UBERON:0010314,9.62e-24,92;UBERON:0001049,1.60e-23,52;UBERON:0005068,1.60e-23,52;UBERON:0006241,1.60e-23,52;UBERON:0007135,1.60e-23,52;UBERON:0010371,1.60e-22,73;UBERON:0004121,5.26e-22,95;UBERON:0000924,5.26e-22,95;UBERON:0006601,5.26e-22,95;UBERON:0003056,7.88e-21,49;UBERON:0000955,3.05e-20,47;UBERON:0006238,3.05e-20,47;UBERON:0002616,1.16e-19,46;UBERON:0003080,1.39e-18,40;UBERON:0002780,7.75e-18,39;UBERON:0001890,7.75e-18,39;UBERON:0006240,7.75e-18,39;UBERON:0002020,4.93e-16,34;UBERON:0003528,4.23e-13,29;UBERON:0002791,4.23e-13,29;UBERON:0001893,4.23e-13,29;UBERON:0000025,1.23e-10,114;UBERON:0004111,3.95e-10,122;UBERON:0000956,1.20e-08,21;UBERON:0001869,1.20e-08,21;UBERON:0000203,1.20e-08,21;UBERON:0002619,1.76e-07,17;UBERON:0002021,3.73e-07,10;UBERON:0000411,3.73e-07,10;UBERON:0001950,3.73e-07,10|phase1_expression=3.52327463630547,0,0.454999239389536,0.90739263392049,0.500895729946347,1.84667199103079,1.16806320297763,0.387369970324729,0.140788722151667,0,0,0.0797721589953364,0,0.0874204024189974,0,0.202475267389826,0,1.10411757875383,1.64537320326887,1.27316895539409,9.95006494767516,0.297872853602656,0,0.95995453676044,2.06468352960453,0,1.29228598847722,0.646413698057667,0.760093677825496,0.252030129759931,0.443461021310609,3.17515336729816,0,0,2.88851619751275,1.99481574430191,2.85837098767317,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0.183546752161682,0.782391344348039,1.74420125104357,0.878744730937887,1.74986909166855,1.1198913730029,1.43752564364972,0.167782606057736,0,0,0,0,0.515672092277442,11.9366711907163,15.340738398889,15.8457850876545,0,0.889294796111139,0,0,0,2.39680088414724,1.92109152660777,3.21437798156281,3.91517221161903,3.15487442027073,20.8525218614777,18.3320888989839,5.02212276781312,5.75072826109418,7.35375029288017,29.731287869835,22.3452841649078,26.5739302533301,13.58428763621,13.174220678747,9.37644067002168,27.080750903134,32.0774687718058,24.2949213965128,18.5616008848411,10.9626194215309,11.9295645328192,0.151452386666368,0.0755715601067855,3.47837386442013,1.72084775396277,0,1.61910957491345,1.29955283489534,1.79210754838934,2.24711072210803,0.340860645156116,0.519572009205738,0,3.66192891419369,0,2.54805239706646,0,0.649473123033642,0.253359865475099,0,1.59857431606684,0,2.22663208597237,0.693941307064543,1.21786191324856,0.691846491768175,1.50722640552623,0.705532242814229,0.753999547978053,0.247194967734374,0.144599356919912,0.884610551949874,1.94120219936891,0.441683036920787,0.484875253135222,1.86391761218122,12.296793474485,9.84399522023239,0.510914110417183,0.479260498023681,0.599902730993408,0.508280908292259,31.1564529962031,18.7575247155637,3.8952849154988,16.339486098074,13.8086346958378,26.8046577481833,17.0353326221146,0.916554274652847,1.7416975885413,8.59257378674494,1.68353484709179,2.47228841629137,4.13823787980251,3.78130472591233,4.52114453507145,4.49040894398764,3.5871841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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:232232 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q91WA3 | |||
|association_with_transcript=50bp_to_ENSMUST00000041736_5end | |||
|cluster_id=chr6:91106709..91106732,+ | |||
|description=CAGE_peak_2_at_Hdac11_5end | |||
|id=chr6:91106709..91106732,+ | |||
|ontology_enrichment_celltype=CL:0000117!9.33e-13!23;CL:0000337!9.33e-13!23;CL:0000540!2.16e-11!33;CL:0000047!2.16e-11!33;CL:0000031!2.16e-11!33;CL:0000404!2.16e-11!33;CL:0000221!5.66e-08!44;CL:0000133!5.66e-08!44;CL:0002319!1.01e-07!43;CL:0000393!8.60e-07!39;CL:0000211!8.60e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.52e-13,23;CL:0000337,3.52e-13,23;CL:0000540,1.04e-11,33;CL:0000047,1.04e-11,33;CL:0000031,1.04e-11,33;CL:0000404,1.04e-11,33;CL:0000221,5.28e-08,44;CL:0000133,5.28e-08,44;CL:0002319,9.56e-08,43;CL:0000393,2.44e-07,39;CL:0000211,2.44e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.79e-26!73;UBERON:0005743!6.79e-26!73;UBERON:0000033!6.18e-24!63;UBERON:0000073!7.22e-24!75;UBERON:0001016!7.22e-24!75;UBERON:0001049!3.00e-23!52;UBERON:0005068!3.00e-23!52;UBERON:0006241!3.00e-23!52;UBERON:0007135!3.00e-23!52;UBERON:0000955!3.19e-22!50;UBERON:0006238!3.19e-22!50;UBERON:0002346!4.45e-22!71;UBERON:0003075!4.45e-22!71;UBERON:0007284!4.45e-22!71;UBERON:0002616!1.20e-21!49;UBERON:0003056!2.10e-20!49;UBERON:0004121!3.76e-19!102;UBERON:0000924!3.76e-19!102;UBERON:0006601!3.76e-19!102;UBERON:0003080!3.00e-18!40;UBERON:0002780!1.59e-17!39;UBERON:0001890!1.59e-17!39;UBERON:0006240!1.59e-17!39;UBERON:0002020!8.63e-16!34;UBERON:0002791!5.93e-13!29;UBERON:0003528!5.93e-13!29;UBERON:0001893!5.93e-13!29;UBERON:0000025!2.76e-11!114;UBERON:0004111!7.22e-11!122;UBERON:0007811!1.33e-10!86;UBERON:0000153!1.47e-10!94;UBERON:0000956!1.22e-08!21;UBERON:0001869!1.22e-08!21;UBERON:0000203!1.22e-08!21;UBERON:0002619!1.61e-07!17;UBERON:0000468!1.90e-07!333;UBERON:0002021!5.98e-07!10;UBERON:0000411!5.98e-07!10;UBERON:0001950!5.98e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.42e-26,64;UBERON:0003075,2.42e-26,64;UBERON:0007284,2.42e-26,64;UBERON:0001017,3.00e-26,73;UBERON:0000073,4.45e-25,54;UBERON:0001016,2.13e-24,75;UBERON:0010314,9.62e-24,92;UBERON:0001049,1.60e-23,52;UBERON:0005068,1.60e-23,52;UBERON:0006241,1.60e-23,52;UBERON:0007135,1.60e-23,52;UBERON:0010371,1.60e-22,73;UBERON:0004121,5.26e-22,95;UBERON:0000924,5.26e-22,95;UBERON:0006601,5.26e-22,95;UBERON:0003056,7.88e-21,49;UBERON:0000955,3.05e-20,47;UBERON:0006238,3.05e-20,47;UBERON:0002616,1.16e-19,46;UBERON:0003080,1.39e-18,40;UBERON:0002780,7.75e-18,39;UBERON:0001890,7.75e-18,39;UBERON:0006240,7.75e-18,39;UBERON:0002020,4.93e-16,34;UBERON:0003528,4.23e-13,29;UBERON:0002791,4.23e-13,29;UBERON:0001893,4.23e-13,29;UBERON:0000025,1.23e-10,114;UBERON:0004111,3.95e-10,122;UBERON:0000956,1.20e-08,21;UBERON:0001869,1.20e-08,21;UBERON:0000203,1.20e-08,21;UBERON:0002619,1.76e-07,17;UBERON:0002021,3.73e-07,10;UBERON:0000411,3.73e-07,10;UBERON:0001950,3.73e-07,10 | |||
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| |||
|short_description=p2@Hdac11 | |||
}} |
Revision as of 07:42, 6 August 2015
Short description: | p2@Hdac11 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Hdac11_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 50bp_to_ENSMUST00000041736_5end |
EntrezGene: | 232232 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.52e-13 | 23 |
neuroblast (sensu Vertebrata) | 3.52e-13 | 23 |
neuron | 1.04e-11 | 33 |
neuronal stem cell | 1.04e-11 | 33 |
neuroblast | 1.04e-11 | 33 |
electrically signaling cell | 1.04e-11 | 33 |
ectodermal cell | 5.28e-08 | 44 |
neurectodermal cell | 5.28e-08 | 44 |
neural cell | 9.56e-08 | 43 |
electrically responsive cell | 2.44e-07 | 39 |
electrically active cell | 2.44e-07 | 39 |