FFCP PHASE1:Mm9::chr8:34710354..34710383,+: Difference between revisions
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{{FFCP|EntrezGene=19053|HGNC=|MCL_coexpression_id=60|UniProt=P62715,Q8BN07|association_with_transcript=261bp_to_ENSMUST00000009774,NM_017374,uc009lkd.1_5end|description=CAGE_peak_4_at_Ppp2cb_5end|id=chr8:34710354..34710383,+|ontology_enrichment_celltype=CL:0000117!5.62e-08!23;CL:0000337!5.62e-08!23|ontology_enrichment_celltype_v019_2=CL:0000117,9.16e-12,23;CL:0000337,9.16e-12,23;CL:0000540,1.56e-08,33;CL:0000047,1.56e-08,33;CL:0000031,1.56e-08,33;CL:0000404,1.56e-08,33;CL:0000221,1.36e-07,44;CL:0000133,1.36e-07,44;CL:0002319,5.18e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.34e-15!71;UBERON:0003075!1.34e-15!71;UBERON:0007284!1.34e-15!71;UBERON:0001049!2.12e-15!52;UBERON:0005068!2.12e-15!52;UBERON:0006241!2.12e-15!52;UBERON:0007135!2.12e-15!52;UBERON:0001017!1.99e-14!73;UBERON:0005743!1.99e-14!73;UBERON:0000073!2.61e-14!75;UBERON:0001016!2.61e-14!75;UBERON:0000033!1.02e-13!63;UBERON:0002616!1.41e-12!49;UBERON:0003056!1.43e-12!49;UBERON:0000955!1.46e-12!50;UBERON:0006238!1.46e-12!50;UBERON:0002020!4.93e-12!34;UBERON:0002780!8.68e-12!39;UBERON:0001890!8.68e-12!39;UBERON:0006240!8.68e-12!39;UBERON:0004121!9.04e-12!102;UBERON:0000924!9.04e-12!102;UBERON:0006601!9.04e-12!102;UBERON:0003080!2.28e-11!40;UBERON:0002791!3.10e-09!29;UBERON:0003528!3.10e-09!29;UBERON:0001893!3.10e-09!29;UBERON:0000153!3.08e-07!94;UBERON:0007811!5.06e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.77e-22,64;UBERON:0003075,1.77e-22,64;UBERON:0007284,1.77e-22,64;UBERON:0000073,5.57e-21,54;UBERON:0010371,1.38e-20,73;UBERON:0001049,3.85e-19,52;UBERON:0005068,3.85e-19,52;UBERON:0006241,3.85e-19,52;UBERON:0007135,3.85e-19,52;UBERON:0003056,1.81e-18,49;UBERON:0002020,4.48e-18,34;UBERON:0001017,1.13e-17,73;UBERON:0004121,1.25e-17,95;UBERON:0000924,1.25e-17,95;UBERON:0006601,1.25e-17,95;UBERON:0001016,7.73e-17,75;UBERON:0002780,2.47e-15,39;UBERON:0001890,2.47e-15,39;UBERON:0006240,2.47e-15,39;UBERON:0002616,3.83e-15,46;UBERON:0010314,4.83e-15,92;UBERON:0003080,9.99e-15,40;UBERON:0000955,1.30e-14,47;UBERON:0006238,1.30e-14,47;UBERON:0003528,3.02e-13,29;UBERON:0002791,3.02e-13,29;UBERON:0001893,3.02e-13,29;UBERON:0002619,1.22e-10,17;UBERON:0000956,1.42e-10,21;UBERON:0001869,1.42e-10,21;UBERON:0000203,1.42e-10,21;UBERON:0002021,4.22e-09,10;UBERON:0000411,4.22e-09,10;UBERON:0001950,4.22e-09,10|phase1_expression=2.40223270657191,0,0.454999239389536,0.30246421130683,0,0,0.233612640595526,0.129123323441576,0.563154888606667,0.234064526321993,0.171217968225505,0.159544317990673,0.171200729931206,0.0874204024189974,0,0,0,0,0.137114433605739,0,1.9559956734746,0.893618560807968,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0.221730510655305,0.635030673459631,0,0,0,0.332469290716985,0.408338712524738,1.25559489221072,0,0,0.588231488031014,0,0.971020706062307,0.503587271902309,0.101376931219515,0.550640256485045,2.34717403304412,0.65407546914134,0.219686182734472,1.94429899074283,0.55994568650145,0,0,0,0.336093799142464,0.257259436035947,0,0.515672092277442,2.02316460859598,1.5869729378161,1.90149421051854,0.677689064138264,0,0.449949858640699,0,0.7104801149461,0.299600110518405,0.768436610643109,1.65903379693564,0.945041568321835,0.630974884054146,3.42781181284564,1.76694832761291,1.22490799214954,1.34183659425531,0,0,1.91531007127782,2.30409799884365,3.16527090552465,7.31901148819277,5.73004707612436,0.837548997004143,3.93933827022176,0.45839474333043,1.76777151284201,3.55929201997757,3.91438836233131,0.757261933331841,0.377857800533928,0,0,1.3599426674155,0,0,0,0.421333260395256,0.340860645156116,0,0,1.83096445709685,0,0,0,0.216491041011214,0.506719730950197,1.51657333504435,0.34255163915718,0.517875767294343,0.148442139064825,0.693941307064543,0.304465478312141,0.691846491768175,1.05505848386836,0.705532242814229,0.376999773989026,0.247194967734374,0.144599356919912,0,0.323533699894818,0.220841518460394,0.484875253135222,0,0.292780797011547,0.83778682725382,0,0.838705871541442,1.19980546198682,1.27070227073065,0.299581278809645,0.915001205637253,1.38219787324151,1.73824320192276,2.04572365864264,2.0778804455956,1.62241263067758,1.52759045775474,0.124406970610093,0.758168275301024,0,1.82168620147785,1.83921683546778,1.80062129805349,2.56198190320716,1.2246569847239,1.15302348256365,1.03071897015702,0,1.5089759505299,0.378212160335639,0.879755620819744,0.43839146485515,0.278047249225598,0.696504333044333,0.61734640922383,1.39323986772945,0,1.28673953557358,0.852490498186778,0.414251545071004,0.469052119962192,1.44049649168812,0.23674473558521,0.196764231747404,0.771335564436891,0.697601834251224,0.536546802799238,0.583826711835847,0,0.820837320395476,0.162137619091711,0.292399974850665,0.219550115291051,0.134206418760372,1.26173969138476,1.85228302282712,0,0,1.70630600428187,0.232236671860439,0.644337306610467,0.403367049246685,0.444756087689741,0.380451252225118,0,0.494096864172033,0.251335208800269,0.596869416123452,0.58489226135736,0,0.216138049874694,0,0.948339504765408,1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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:19053 | |||
|HGNC= | |||
|MCL_coexpression_id=60 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P62715,uniprot:Q8BN07 | |||
|association_with_transcript=261bp_to_ENSMUST00000009774,NM_017374,uc009lkd.1_5end | |||
|cluster_id=chr8:34710354..34710383,+ | |||
|description=CAGE_peak_4_at_Ppp2cb_5end | |||
|id=chr8:34710354..34710383,+ | |||
|ontology_enrichment_celltype=CL:0000117!5.62e-08!23;CL:0000337!5.62e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.16e-12,23;CL:0000337,9.16e-12,23;CL:0000540,1.56e-08,33;CL:0000047,1.56e-08,33;CL:0000031,1.56e-08,33;CL:0000404,1.56e-08,33;CL:0000221,1.36e-07,44;CL:0000133,1.36e-07,44;CL:0002319,5.18e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.34e-15!71;UBERON:0003075!1.34e-15!71;UBERON:0007284!1.34e-15!71;UBERON:0001049!2.12e-15!52;UBERON:0005068!2.12e-15!52;UBERON:0006241!2.12e-15!52;UBERON:0007135!2.12e-15!52;UBERON:0001017!1.99e-14!73;UBERON:0005743!1.99e-14!73;UBERON:0000073!2.61e-14!75;UBERON:0001016!2.61e-14!75;UBERON:0000033!1.02e-13!63;UBERON:0002616!1.41e-12!49;UBERON:0003056!1.43e-12!49;UBERON:0000955!1.46e-12!50;UBERON:0006238!1.46e-12!50;UBERON:0002020!4.93e-12!34;UBERON:0002780!8.68e-12!39;UBERON:0001890!8.68e-12!39;UBERON:0006240!8.68e-12!39;UBERON:0004121!9.04e-12!102;UBERON:0000924!9.04e-12!102;UBERON:0006601!9.04e-12!102;UBERON:0003080!2.28e-11!40;UBERON:0002791!3.10e-09!29;UBERON:0003528!3.10e-09!29;UBERON:0001893!3.10e-09!29;UBERON:0000153!3.08e-07!94;UBERON:0007811!5.06e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.77e-22,64;UBERON:0003075,1.77e-22,64;UBERON:0007284,1.77e-22,64;UBERON:0000073,5.57e-21,54;UBERON:0010371,1.38e-20,73;UBERON:0001049,3.85e-19,52;UBERON:0005068,3.85e-19,52;UBERON:0006241,3.85e-19,52;UBERON:0007135,3.85e-19,52;UBERON:0003056,1.81e-18,49;UBERON:0002020,4.48e-18,34;UBERON:0001017,1.13e-17,73;UBERON:0004121,1.25e-17,95;UBERON:0000924,1.25e-17,95;UBERON:0006601,1.25e-17,95;UBERON:0001016,7.73e-17,75;UBERON:0002780,2.47e-15,39;UBERON:0001890,2.47e-15,39;UBERON:0006240,2.47e-15,39;UBERON:0002616,3.83e-15,46;UBERON:0010314,4.83e-15,92;UBERON:0003080,9.99e-15,40;UBERON:0000955,1.30e-14,47;UBERON:0006238,1.30e-14,47;UBERON:0003528,3.02e-13,29;UBERON:0002791,3.02e-13,29;UBERON:0001893,3.02e-13,29;UBERON:0002619,1.22e-10,17;UBERON:0000956,1.42e-10,21;UBERON:0001869,1.42e-10,21;UBERON:0000203,1.42e-10,21;UBERON:0002021,4.22e-09,10;UBERON:0000411,4.22e-09,10;UBERON:0001950,4.22e-09,10 | |||
|phase1_expression=2.40223270657191,0,0.454999239389536,0.30246421130683,0,0,0.233612640595526,0.129123323441576,0.563154888606667,0.234064526321993,0.171217968225505,0.159544317990673,0.171200729931206,0.0874204024189974,0,0,0,0,0.137114433605739,0,1.9559956734746,0.893618560807968,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0.221730510655305,0.635030673459631,0,0,0,0.332469290716985,0.408338712524738,1.25559489221072,0,0,0.588231488031014,0,0.971020706062307,0.503587271902309,0.101376931219515,0.550640256485045,2.34717403304412,0.65407546914134,0.219686182734472,1.94429899074283,0.55994568650145,0,0,0,0.336093799142464,0.257259436035947,0,0.515672092277442,2.02316460859598,1.5869729378161,1.90149421051854,0.677689064138264,0,0.449949858640699,0,0.7104801149461,0.299600110518405,0.768436610643109,1.65903379693564,0.945041568321835,0.630974884054146,3.42781181284564,1.76694832761291,1.22490799214954,1.34183659425531,0,0,1.91531007127782,2.30409799884365,3.16527090552465,7.31901148819277,5.73004707612436,0.837548997004143,3.93933827022176,0.45839474333043,1.76777151284201,3.55929201997757,3.91438836233131,0.757261933331841,0.377857800533928,0,0,1.3599426674155,0,0,0,0.421333260395256,0.340860645156116,0,0,1.83096445709685,0,0,0,0.216491041011214,0.506719730950197,1.51657333504435,0.34255163915718,0.517875767294343,0.148442139064825,0.693941307064543,0.304465478312141,0.691846491768175,1.05505848386836,0.705532242814229,0.376999773989026,0.247194967734374,0.144599356919912,0,0.323533699894818,0.220841518460394,0.484875253135222,0,0.292780797011547,0.83778682725382,0,0.838705871541442,1.19980546198682,1.27070227073065,0.299581278809645,0.915001205637253,1.38219787324151,1.73824320192276,2.04572365864264,2.0778804455956,1.62241263067758,1.52759045775474,0.124406970610093,0.758168275301024,0,1.82168620147785,1.83921683546778,1.80062129805349,2.56198190320716,1.2246569847239,1.15302348256365,1.03071897015702,0,1.5089759505299,0.378212160335639,0.879755620819744,0.43839146485515,0.278047249225598,0.696504333044333,0.61734640922383,1.39323986772945,0,1.28673953557358,0.852490498186778,0.414251545071004,0.469052119962192,1.44049649168812,0.23674473558521,0.196764231747404,0.771335564436891,0.697601834251224,0.536546802799238,0.583826711835847,0,0.820837320395476,0.162137619091711,0.292399974850665,0.219550115291051,0.134206418760372,1.26173969138476,1.85228302282712,0,0,1.70630600428187,0.232236671860439,0.644337306610467,0.403367049246685,0.444756087689741,0.380451252225118,0,0.494096864172033,0.251335208800269,0.596869416123452,0.58489226135736,0,0.216138049874694,0,0.948339504765408,1.14248512609729,0,0.203651327845314,0.387904974335251,0.771494018793504,0.316182685621286,0.147610147979602,0.156998727841375,0.370191491765402,0,0.500535317148282,0.196558995113203,0,0.608580364165509,0.241177159752417,0,0.287696137450811,0.486405680325106,0.274561413188081,0,0,0,0.252578877947112,0,0,0,0.947457058852424,0.488894929326078,0.678980343100753,0.469380496577004,0.335012514883631,0.238043640886014,0.195133647857799,0.472905432318573,0.664394068946325,0.637819074629948,0.163863314715738,0.345369963731791,0.723245292907558,0,0.54390568381871,0,0,1.44495530989013,1.17211686592203,0.163934945376675,0,0.315508219416257,0.390438744296638,1.07711698866399,0.716906393857656,0.445597348164788,0,0.809621403349789,0,0.395287777946524,0.642642632843614,0.709700426041343,1.42452482933804,1.14020871547503,0,0,1.94224508923985,0,0.565815239267694,0.295301892880773,0.922305443831782,0.516856586336442,0,0.712994756769443,0,0,0,0.340439605753788,1.08036656418786,2.45781499187234,2.57204442037911,1.41872186913819,0.713475270408282,0.987294123612726,0.608929898229199,0.938686832254841,1.0591603543191,0,0.16488625294148,0.484393280087717,0.0603129249281559,0.119372344003136,0.164140899745061,0,0.927126510052548,0,0.82554747185289,0.370389054739423,0,0.136694227721025,0.457556346413045,0.849892149969277,0.559805809294632,0.967399816630967,0,0.632671987162271,0.609958401380546,0.756037385752609,1.67270636811575,0.218362563746178,0.944050424693745,0.495920734352016,0.523511883968059,0.259229946583586,0,9.01908701894705,1.19613236835183,0.992750942742586,0.583353565032143,1.54991788173277,0.844780627453891,0.58678619322877,1.0416350787516,0.734015410979976,2.65742532908607,5.76060012515731,0.632022241256357,0.608175645870493,0.410843828659309,0.389762468933385,0.358053391334963,0.79472541912506,0.240390899039938,0.443068581523732,0.100966449948148,0.0762068066549998,0.201652370273681,0.292373642219257,0.0962118416403295,0,0.226730383615211,0.887943813496259,0.538283139656854,1.34307693091263,0,0.563047426353546,0,0.214368379079066,1.00314420807073,0,1.84130094602871,2.86447756719698,1.89038500578056,2.74033007908257,3.0215755895588,2.70009000092722,1.35096360967266,2.26571204492102,2.07104124700728,1.3492355185943,0.798049746802062,1.19513524027894,0.486213434136588,1.46729213839588,0.551530525350042,0.222246727801615,0.824140228955577,0.6418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| |||
|short_description=p4@Ppp2cb | |||
}} |
Revision as of 08:27, 6 August 2015
Short description: | p4@Ppp2cb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Ppp2cb_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | 261bp_to_ENSMUST00000009774, NM_017374, uc009lkd.1_5end |
EntrezGene: | 19053 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.16e-12 | 23 |
neuroblast (sensu Vertebrata) | 9.16e-12 | 23 |
neuron | 1.56e-08 | 33 |
neuronal stem cell | 1.56e-08 | 33 |
neuroblast | 1.56e-08 | 33 |
electrically signaling cell | 1.56e-08 | 33 |
ectodermal cell | 1.36e-07 | 44 |
neurectodermal cell | 1.36e-07 | 44 |
neural cell | 5.18e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 1.77e-22 | 64 |
neural plate | 1.77e-22 | 64 |
presumptive neural plate | 1.77e-22 | 64 |
regional part of nervous system | 5.57e-21 | 54 |
ecto-epithelium | 1.38e-20 | 73 |
neural tube | 3.85e-19 | 52 |
neural rod | 3.85e-19 | 52 |
future spinal cord | 3.85e-19 | 52 |
neural keel | 3.85e-19 | 52 |
pre-chordal neural plate | 1.81e-18 | 49 |
gray matter | 4.48e-18 | 34 |
central nervous system | 1.13e-17 | 73 |
ectoderm-derived structure | 1.25e-17 | 95 |
ectoderm | 1.25e-17 | 95 |
presumptive ectoderm | 1.25e-17 | 95 |
nervous system | 7.73e-17 | 75 |
regional part of forebrain | 2.47e-15 | 39 |
forebrain | 2.47e-15 | 39 |
future forebrain | 2.47e-15 | 39 |
regional part of brain | 3.83e-15 | 46 |
structure with developmental contribution from neural crest | 4.83e-15 | 92 |
anterior neural tube | 9.99e-15 | 40 |
brain | 1.30e-14 | 47 |
future brain | 1.30e-14 | 47 |
brain grey matter | 3.02e-13 | 29 |
regional part of telencephalon | 3.02e-13 | 29 |
telencephalon | 3.02e-13 | 29 |
regional part of cerebral cortex | 1.22e-10 | 17 |
cerebral cortex | 1.42e-10 | 21 |
cerebral hemisphere | 1.42e-10 | 21 |
pallium | 1.42e-10 | 21 |
occipital lobe | 4.22e-09 | 10 |
visual cortex | 4.22e-09 | 10 |
neocortex | 4.22e-09 | 10 |