FFCP PHASE1:Mm9::chrX:54465254..54465274,+: Difference between revisions
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{{FFCP|EntrezGene=21947|HGNC=|MCL_coexpression_id=7|UniProt=P27548,Q0VEI3|association_with_transcript=-45bp_to_ENSMUST00000033466,NM_011616,uc009thb.1_5end|description=CAGE_peak_1_at_Cd40lg_5end|id=chrX:54465254..54465274,+|ontology_enrichment_celltype=CL:0000791!3.64e-15!9;CL:0000789!3.64e-15!9;CL:0002420!3.64e-15!9;CL:0002419!3.64e-15!9;CL:0000790!3.64e-15!9;CL:0000624!3.51e-14!8;CL:0000838!8.15e-13!12;CL:0000084!5.77e-12!11;CL:0000827!5.77e-12!11;CL:0002031!1.22e-11!25;CL:0000542!1.27e-11!13;CL:0000051!1.27e-11!13;CL:0000893!3.77e-11!6;CL:0002489!3.77e-11!6;CL:0000898!3.77e-11!6;CL:0000809!3.77e-11!6;CL:0000810!3.77e-11!6;CL:0000895!3.77e-11!6;CL:0000808!3.77e-11!6;CL:0000894!3.77e-11!6;CL:0000806!3.77e-11!6;CL:0000807!3.77e-11!6;CL:0000805!3.77e-11!6;CL:0002425!3.77e-11!6;CL:0002436!3.77e-11!6;CL:0002427!3.77e-11!6;CL:0002428!3.77e-11!6;CL:0002429!3.77e-11!6;CL:0002433!3.77e-11!6;CL:0002431!3.77e-11!6;CL:0002432!3.77e-11!6;CL:0000738!2.86e-08!17;CL:0002087!2.86e-08!17;CL:0000988!3.52e-08!32;CL:0002032!3.52e-08!32;CL:0000037!3.52e-08!32;CL:0000566!3.52e-08!32;CL:0000837!3.52e-08!32|ontology_enrichment_celltype_v019_2=CL:0000624,2.97e-29,8;CL:0000791,7.19e-26,9;CL:0000789,7.19e-26,9;CL:0002420,7.19e-26,9;CL:0002419,7.19e-26,9;CL:0000790,7.19e-26,9;CL:0000893,1.40e-22,6;CL:0002489,1.40e-22,6;CL:0000898,1.40e-22,6;CL:0000809,1.40e-22,6;CL:0000810,1.40e-22,6;CL:0000895,1.40e-22,6;CL:0000808,1.40e-22,6;CL:0000894,1.40e-22,6;CL:0000806,1.40e-22,6;CL:0000807,1.40e-22,6;CL:0000805,1.40e-22,6;CL:0002425,1.40e-22,6;CL:0002436,1.40e-22,6;CL:0002427,1.40e-22,6;CL:0002428,1.40e-22,6;CL:0002429,1.40e-22,6;CL:0002433,1.40e-22,6;CL:0002431,1.40e-22,6;CL:0002432,1.40e-22,6;CL:0000084,6.06e-21,11;CL:0000827,6.06e-21,11;CL:0000838,4.28e-19,12;CL:0000542,1.57e-17,13;CL:0000051,1.57e-17,13;CL:0002031,1.37e-15,25;CL:0000738,4.15e-13,17;CL:0002087,4.15e-13,17;CL:0000988,9.86e-12,32;CL:0002032,9.86e-12,32;CL:0000037,9.86e-12,32;CL:0000837,9.86e-12,32;CL:0002320,1.52e-07,46;CL:0000134,1.52e-07,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.01e-21!48;UBERON:0004177!5.60e-21!29;UBERON:0002390!1.08e-18!45;UBERON:0003061!1.08e-18!45;UBERON:0002370!4.73e-18!23;UBERON:0000974!4.73e-18!23;UBERON:0004807!4.73e-18!23;UBERON:0005058!4.73e-18!23;UBERON:0003351!4.73e-18!23;UBERON:0009113!4.73e-18!23;UBERON:0003295!4.73e-18!23;UBERON:0009722!4.73e-18!23;UBERON:0005562!4.73e-18!23;UBERON:0007690!4.73e-18!23;UBERON:0006562!4.46e-17!24;UBERON:0003408!4.46e-17!24;UBERON:0001557!4.46e-17!24;UBERON:0001042!4.46e-17!24;UBERON:0008814!4.46e-17!24;UBERON:0009145!4.46e-17!24;UBERON:0000072!1.36e-14!27;UBERON:0002405!2.88e-14!70;UBERON:0000065!1.11e-12!41;UBERON:0001004!3.11e-12!42;UBERON:0000063!1.81e-11!35;UBERON:0005057!2.95e-11!51;UBERON:0001007!1.11e-09!128;UBERON:0001555!1.11e-09!128;UBERON:0007026!1.11e-09!128;UBERON:0004119!2.28e-09!130;UBERON:0000925!2.28e-09!130;UBERON:0006595!2.28e-09!130;UBERON:0003081!7.71e-09!88;UBERON:0004921!1.17e-08!126;UBERON:0004185!1.17e-08!126;UBERON:0001041!1.63e-08!92;UBERON:0000077!2.11e-08!97|ontology_enrichment_uberon_v019_2=UBERON:0004177,2.61e-40,29;UBERON:0005057,2.61e-40,29;UBERON:0002370,7.37e-37,23;UBERON:0000974,7.37e-37,23;UBERON:0004807,7.37e-37,23;UBERON:0005058,7.37e-37,23;UBERON:0003351,7.37e-37,23;UBERON:0009113,7.37e-37,23;UBERON:0003295,7.37e-37,23;UBERON:0009722,7.37e-37,23;UBERON:0005562,7.37e-37,23;UBERON:0007690,7.37e-37,23;UBERON:0006562,3.40e-35,24;UBERON:0003408,3.40e-35,24;UBERON:0001557,3.40e-35,24;UBERON:0001042,3.40e-35,24;UBERON:0008814,3.40e-35,24;UBERON:0009145,3.40e-35,24;UBERON:0002193,1.59e-34,48;UBERON:0002405,1.59e-34,48;UBERON:0002390,1.42e-33,45;UBERON:0003061,1.42e-33,45;UBERON:0000077,8.59e-33,35;UBERON:0000072,6.12e-31,27;UBERON:0007811,2.01e-22,36;UBERON:0000065,8.37e-22,41;UBERON:0001004,3.32e-21,42;UBERON:0000153,2.93e-18,43;UBERON:0003081,1.91e-15,87;UBERON:0001041,8.91e-14,80;UBERON:0003929,1.39e-13,55;UBERON:0002368,3.46e-12,60;UBERON:0005911,1.34e-11,69;UBERON:0002530,5.25e-11,65;UBERON:0000490,8.61e-11,66;UBERON:0000926,4.56e-10,120;UBERON:0004120,4.56e-10,120;UBERON:0006603,4.56e-10,120;UBERON:0000949,1.25e-09,72;UBERON:0004921,1.62e-08,114;UBERON:0001007,2.65e-08,116;UBERON:0001555,2.65e-08,116;UBERON:0007026,2.65e-08,116;UBERON:0004119,4.27e-08,118;UBERON:0000925,4.27e-08,118;UBERON:0006595,4.27e-08,118;UBERON:0002384,1.52e-07,46|phase1_expression=0,0,0,0,0,0,0,10.7172358456508,3384.70166924822,2778.57999196838,252.204067196169,283.829341705407,73.1027116806249,68.7998567037509,0,0.809901069559304,0.699561878128147,2.83915948822414,2.87940310572051,1.27316895539409,0.0850432901510698,0,0,0.159992422793407,0.22940928106717,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,31.9159342484992,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,31.0725460376606,0.742210695324124,0,0,0,0,0,0,0,0.289198713839823,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,1.10851914099963,0,0,0,0,0,0,0,0.315270288212382,0,0,0,0.518054945597687,0.433947175744535,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0.632073515871632,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0.582961673259701,0,2.39219233116994,0,0,0.376736914009382,1.91371918809435,1.37266903923914,0,0,0,0.954670618015114,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.3764003426144,0,0,0,0.179026695667481,1.58945083825012,3.4856680360791,5.31682297828478,3.63479219813331,2.89585865288999,4.33552596088414,7.30934105548143,5.8689223400601,7.48012173962041,0,0,0,0,0.579568782096571,0,0.183151624267265,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@Cd40lg}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:21947 | |||
|HGNC= | |||
|MCL_coexpression_id=7 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P27548,uniprot:Q0VEI3 | |||
|association_with_transcript=-45bp_to_ENSMUST00000033466,NM_011616,uc009thb.1_5end | |||
|cluster_id=chrX:54465254..54465274,+ | |||
|description=CAGE_peak_1_at_Cd40lg_5end | |||
|id=chrX:54465254..54465274,+ | |||
|ontology_enrichment_celltype=CL:0000791!3.64e-15!9;CL:0000789!3.64e-15!9;CL:0002420!3.64e-15!9;CL:0002419!3.64e-15!9;CL:0000790!3.64e-15!9;CL:0000624!3.51e-14!8;CL:0000838!8.15e-13!12;CL:0000084!5.77e-12!11;CL:0000827!5.77e-12!11;CL:0002031!1.22e-11!25;CL:0000542!1.27e-11!13;CL:0000051!1.27e-11!13;CL:0000893!3.77e-11!6;CL:0002489!3.77e-11!6;CL:0000898!3.77e-11!6;CL:0000809!3.77e-11!6;CL:0000810!3.77e-11!6;CL:0000895!3.77e-11!6;CL:0000808!3.77e-11!6;CL:0000894!3.77e-11!6;CL:0000806!3.77e-11!6;CL:0000807!3.77e-11!6;CL:0000805!3.77e-11!6;CL:0002425!3.77e-11!6;CL:0002436!3.77e-11!6;CL:0002427!3.77e-11!6;CL:0002428!3.77e-11!6;CL:0002429!3.77e-11!6;CL:0002433!3.77e-11!6;CL:0002431!3.77e-11!6;CL:0002432!3.77e-11!6;CL:0000738!2.86e-08!17;CL:0002087!2.86e-08!17;CL:0000988!3.52e-08!32;CL:0002032!3.52e-08!32;CL:0000037!3.52e-08!32;CL:0000566!3.52e-08!32;CL:0000837!3.52e-08!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,2.97e-29,8;CL:0000791,7.19e-26,9;CL:0000789,7.19e-26,9;CL:0002420,7.19e-26,9;CL:0002419,7.19e-26,9;CL:0000790,7.19e-26,9;CL:0000893,1.40e-22,6;CL:0002489,1.40e-22,6;CL:0000898,1.40e-22,6;CL:0000809,1.40e-22,6;CL:0000810,1.40e-22,6;CL:0000895,1.40e-22,6;CL:0000808,1.40e-22,6;CL:0000894,1.40e-22,6;CL:0000806,1.40e-22,6;CL:0000807,1.40e-22,6;CL:0000805,1.40e-22,6;CL:0002425,1.40e-22,6;CL:0002436,1.40e-22,6;CL:0002427,1.40e-22,6;CL:0002428,1.40e-22,6;CL:0002429,1.40e-22,6;CL:0002433,1.40e-22,6;CL:0002431,1.40e-22,6;CL:0002432,1.40e-22,6;CL:0000084,6.06e-21,11;CL:0000827,6.06e-21,11;CL:0000838,4.28e-19,12;CL:0000542,1.57e-17,13;CL:0000051,1.57e-17,13;CL:0002031,1.37e-15,25;CL:0000738,4.15e-13,17;CL:0002087,4.15e-13,17;CL:0000988,9.86e-12,32;CL:0002032,9.86e-12,32;CL:0000037,9.86e-12,32;CL:0000837,9.86e-12,32;CL:0002320,1.52e-07,46;CL:0000134,1.52e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.01e-21!48;UBERON:0004177!5.60e-21!29;UBERON:0002390!1.08e-18!45;UBERON:0003061!1.08e-18!45;UBERON:0002370!4.73e-18!23;UBERON:0000974!4.73e-18!23;UBERON:0004807!4.73e-18!23;UBERON:0005058!4.73e-18!23;UBERON:0003351!4.73e-18!23;UBERON:0009113!4.73e-18!23;UBERON:0003295!4.73e-18!23;UBERON:0009722!4.73e-18!23;UBERON:0005562!4.73e-18!23;UBERON:0007690!4.73e-18!23;UBERON:0006562!4.46e-17!24;UBERON:0003408!4.46e-17!24;UBERON:0001557!4.46e-17!24;UBERON:0001042!4.46e-17!24;UBERON:0008814!4.46e-17!24;UBERON:0009145!4.46e-17!24;UBERON:0000072!1.36e-14!27;UBERON:0002405!2.88e-14!70;UBERON:0000065!1.11e-12!41;UBERON:0001004!3.11e-12!42;UBERON:0000063!1.81e-11!35;UBERON:0005057!2.95e-11!51;UBERON:0001007!1.11e-09!128;UBERON:0001555!1.11e-09!128;UBERON:0007026!1.11e-09!128;UBERON:0004119!2.28e-09!130;UBERON:0000925!2.28e-09!130;UBERON:0006595!2.28e-09!130;UBERON:0003081!7.71e-09!88;UBERON:0004921!1.17e-08!126;UBERON:0004185!1.17e-08!126;UBERON:0001041!1.63e-08!92;UBERON:0000077!2.11e-08!97 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,2.61e-40,29;UBERON:0005057,2.61e-40,29;UBERON:0002370,7.37e-37,23;UBERON:0000974,7.37e-37,23;UBERON:0004807,7.37e-37,23;UBERON:0005058,7.37e-37,23;UBERON:0003351,7.37e-37,23;UBERON:0009113,7.37e-37,23;UBERON:0003295,7.37e-37,23;UBERON:0009722,7.37e-37,23;UBERON:0005562,7.37e-37,23;UBERON:0007690,7.37e-37,23;UBERON:0006562,3.40e-35,24;UBERON:0003408,3.40e-35,24;UBERON:0001557,3.40e-35,24;UBERON:0001042,3.40e-35,24;UBERON:0008814,3.40e-35,24;UBERON:0009145,3.40e-35,24;UBERON:0002193,1.59e-34,48;UBERON:0002405,1.59e-34,48;UBERON:0002390,1.42e-33,45;UBERON:0003061,1.42e-33,45;UBERON:0000077,8.59e-33,35;UBERON:0000072,6.12e-31,27;UBERON:0007811,2.01e-22,36;UBERON:0000065,8.37e-22,41;UBERON:0001004,3.32e-21,42;UBERON:0000153,2.93e-18,43;UBERON:0003081,1.91e-15,87;UBERON:0001041,8.91e-14,80;UBERON:0003929,1.39e-13,55;UBERON:0002368,3.46e-12,60;UBERON:0005911,1.34e-11,69;UBERON:0002530,5.25e-11,65;UBERON:0000490,8.61e-11,66;UBERON:0000926,4.56e-10,120;UBERON:0004120,4.56e-10,120;UBERON:0006603,4.56e-10,120;UBERON:0000949,1.25e-09,72;UBERON:0004921,1.62e-08,114;UBERON:0001007,2.65e-08,116;UBERON:0001555,2.65e-08,116;UBERON:0007026,2.65e-08,116;UBERON:0004119,4.27e-08,118;UBERON:0000925,4.27e-08,118;UBERON:0006595,4.27e-08,118;UBERON:0002384,1.52e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,10.7172358456508,3384.70166924822,2778.57999196838,252.204067196169,283.829341705407,73.1027116806249,68.7998567037509,0,0.809901069559304,0.699561878128147,2.83915948822414,2.87940310572051,1.27316895539409,0.0850432901510698,0,0,0.159992422793407,0.22940928106717,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,31.9159342484992,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,31.0725460376606,0.742210695324124,0,0,0,0,0,0,0,0.289198713839823,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,1.10851914099963,0,0,0,0,0,0,0,0.315270288212382,0,0,0,0.518054945597687,0.433947175744535,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0.632073515871632,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0.582961673259701,0,2.39219233116994,0,0,0.376736914009382,1.91371918809435,1.37266903923914,0,0,0,0.954670618015114,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.3764003426144,0,0,0,0.179026695667481,1.58945083825012,3.4856680360791,5.31682297828478,3.63479219813331,2.89585865288999,4.33552596088414,7.30934105548143,5.8689223400601,7.48012173962041,0,0,0,0,0.579568782096571,0,0.183151624267265,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@Cd40lg | |||
}} |
Revision as of 08:28, 6 August 2015
Short description: | p1@Cd40lg |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cd40lg_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | -45bp_to_ENSMUST00000033466, NM_011616, uc009thb.1_5end |
EntrezGene: | 21947 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data