FFCP PHASE1:Hg19::chr3:147121835..147121852,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84107 | |EntrezGene=84107 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20393 | |HGNC=20393 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N9L1 | |UniProt=Q8N9L1 | ||
|association_with_transcript=218bp_to_ENST00000484399_5end | |association_with_transcript=218bp_to_ENST00000484399_5end | ||
|cluster_id=chr3:147121835..147121852,- | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_9_at_ZIC4_5end | |description=CAGE_peak_9_at_ZIC4_5end | ||
|id=chr3:147121835..147121852,- | |id=chr3:147121835..147121852,- | ||
|ontology_enrichment_celltype=CL:0002603!1.44e-21!3;CL:0000064!1.23e-20!3;CL:0005012!1.23e-20!3;CL:0000067!1.23e-20!3;CL:0002304!1.23e-20!3;CL:0002575!2.72e-15!2;CL:0002590!1.96e-10!3;CL:0000708!2.98e-10!3;CL:0000128!1.49e-09!7;CL:0000126!1.49e-09!7;CL:0000127!1.49e-09!7;CL:0002453!1.49e-09!7 | |ontology_enrichment_celltype=CL:0002603!1.44e-21!3;CL:0000064!1.23e-20!3;CL:0005012!1.23e-20!3;CL:0000067!1.23e-20!3;CL:0002304!1.23e-20!3;CL:0002575!2.72e-15!2;CL:0002590!1.96e-10!3;CL:0000708!2.98e-10!3;CL:0000128!1.49e-09!7;CL:0000126!1.49e-09!7;CL:0000127!1.49e-09!7;CL:0002453!1.49e-09!7 | ||
|ontology_enrichment_celltype_v019=CL:0000346;2.59e-12;3!CL:1000428;2.59e-12;3!CL:0002590;3.06e-12;3!CL:0002603;3.06e-12;3!CL:0002559;6.55e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,2.59e-12,3;CL:1000428,2.59e-12,3;CL:0002590,2.89e-12,3;CL:0002603,3.24e-12,3;CL:0002559,6.55e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.06e-99;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p9@ZIC4 | |short_description=p9@ZIC4 | ||
}} | }} |
Latest revision as of 18:36, 15 September 2015
Short description: | p9@ZIC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_ZIC4_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 218bp_to_ENST00000484399_5end |
EntrezGene: | ZIC4 |
HGNC: | 20393 |
UniProt: | Q8N9L1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 2.59e-12 | 3 |
stem cell of epidermis | 2.59e-12 | 3 |
smooth muscle cell of the brain vasculature | 2.89e-12 | 3 |
astrocyte of the cerebellum | 3.24e-12 | 3 |
hair follicle cell | 6.55e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.10e-87 | 6 |
rhombic lip | 1.10e-87 | 6 |
regional part of metencephalon | 8.65e-59 | 9 |
metencephalon | 8.65e-59 | 9 |
future metencephalon | 8.65e-59 | 9 |
segmental subdivision of hindbrain | 2.54e-44 | 12 |
hindbrain | 2.54e-44 | 12 |
presumptive hindbrain | 2.54e-44 | 12 |
segmental subdivision of nervous system | 5.58e-41 | 13 |
posterior neural tube | 1.25e-35 | 15 |
chordal neural plate | 1.25e-35 | 15 |
dermal papilla | 2.59e-12 | 3 |
papillary layer of dermis | 2.59e-12 | 3 |
brain | 2.95e-12 | 68 |
future brain | 2.95e-12 | 68 |
central nervous system | 2.09e-10 | 81 |
regional part of nervous system | 2.23e-10 | 53 |
regional part of brain | 2.23e-10 | 53 |
neural tube | 7.34e-10 | 56 |
neural rod | 7.34e-10 | 56 |
future spinal cord | 7.34e-10 | 56 |
neural keel | 7.34e-10 | 56 |
nervous system | 1.98e-09 | 89 |
ecto-epithelium | 2.57e-08 | 104 |
hair follicle | 6.55e-08 | 5 |
hair follicle placode | 6.55e-08 | 5 |
brain vasculature | 7.01e-08 | 5 |
ectoderm-derived structure | 3.21e-07 | 171 |
ectoderm | 3.21e-07 | 171 |
presumptive ectoderm | 3.21e-07 | 171 |
neural plate | 6.33e-07 | 82 |
presumptive neural plate | 6.33e-07 | 82 |