FFCP PHASE1:Hg19::chrX:48367338..48367424,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:48367338..48367424,+ to FFCP PHASE1:Hg19::chrX:48367338..48367424,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64840 | |EntrezGene=64840 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17652 | |HGNC=17652 | ||
|TSSclassifier=strong | |||
|UniProt=B7ZAR3,F8WEW7,F2Z360,C9JWI5,Q9H237 | |UniProt=B7ZAR3,F8WEW7,F2Z360,C9JWI5,Q9H237 | ||
|association_with_transcript=0bp_to_ENST00000355961,ENST00000359882,ENST00000367574,ENST00000472520,ENST00000485288,ENST00000486272,ENST00000489940,ENST00000491243,ENST00000528612,ENST00000537758,NM_022825,NM_203473,uc004djq.1,uc004djr.1,uc004djs.1,uc004djt.1,uc004dju.1,uc010nie.1,uc011mlx.1_5end | |||
|cluster_id=chrX:48367338..48367424,+ | |||
|description=CAGE_peak_1_at_PORCN_5end | |||
|id=chrX:48367338..48367424,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000924!3.39e-14!173;UBERON:0006601!3.39e-14!173;UBERON:0004121!3.43e-13!169;UBERON:0001049!1.15e-11!57;UBERON:0005068!1.15e-11!57;UBERON:0006241!1.15e-11!57;UBERON:0007135!1.15e-11!57;UBERON:0000955!1.56e-11!69;UBERON:0006238!1.56e-11!69;UBERON:0001017!1.91e-11!82;UBERON:0000033!2.07e-11!123;UBERON:0000153!2.62e-11!129;UBERON:0007811!2.62e-11!129;UBERON:0000073!2.70e-11!94;UBERON:0001016!2.70e-11!94;UBERON:0002616!1.74e-10!59;UBERON:0005743!2.26e-10!86;UBERON:0002780!8.46e-10!41;UBERON:0001890!8.46e-10!41;UBERON:0006240!8.46e-10!41;UBERON:0003080!9.12e-10!42;UBERON:0001893!1.03e-09!34;UBERON:0001869!2.04e-09!32;UBERON:0002791!2.73e-09!33;UBERON:0002346!5.23e-09!90;UBERON:0002020!5.29e-09!34;UBERON:0003528!5.29e-09!34;UBERON:0002619!1.45e-08!22;UBERON:0000468!2.83e-08!659;UBERON:0000480!3.78e-08!626;UBERON:0000467!4.39e-08!625;UBERON:0003075!4.66e-08!86;UBERON:0007284!4.66e-08!86;UBERON:0001950!5.14e-08!20;UBERON:0000956!2.23e-07!25;UBERON:0000203!2.23e-07!25;UBERON:0000064!3.68e-07!219;UBERON:0002050!6.66e-07!605;UBERON:0005423!6.66e-07!605;UBERON:0000923!7.58e-07!604;UBERON:0005291!7.58e-07!604;UBERON:0006598!7.58e-07!604;UBERON:0002532!7.58e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.40e-08;22!UBERON:0001893;1.42e-08;34!UBERON:0001869;1.68e-08;32!UBERON:0002791;2.94e-08;32!UBERON:0001950;4.84e-08;20!UBERON:0003528;5.80e-08;34!UBERON:0002020;5.80e-08;34!UBERON:0000956;2.16e-07;25!UBERON:0000203;2.16e-07;25!UBERON:0002780;4.03e-07;41!UBERON:0001890;4.03e-07;41!UBERON:0000073;6.52e-07;53!UBERON:0002616;6.52e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,8.91e-15,171;UBERON:0000924,8.91e-15,171;UBERON:0006601,8.91e-15,171;UBERON:0001016,2.40e-12,89;UBERON:0001049,1.10e-11,56;UBERON:0005068,1.10e-11,56;UBERON:0006241,1.10e-11,56;UBERON:0007135,1.10e-11,56;UBERON:0000073,1.22e-11,53;UBERON:0002616,1.22e-11,53;UBERON:0000955,1.56e-11,68;UBERON:0006238,1.56e-11,68;UBERON:0001017,1.97e-11,81;UBERON:0010371,6.52e-11,104;UBERON:0002780,8.45e-10,41;UBERON:0001890,8.45e-10,41;UBERON:0003080,8.45e-10,41;UBERON:0006240,8.45e-10,41;UBERON:0001893,1.03e-09,34;UBERON:0001869,2.04e-09,32;UBERON:0002346,2.42e-09,86;UBERON:0002791,4.32e-09,32;UBERON:0003528,5.28e-09,34;UBERON:0002020,5.28e-09,34;UBERON:0002619,1.45e-08,22;UBERON:0003075,2.28e-08,82;UBERON:0007284,2.28e-08,82;UBERON:0001950,5.14e-08,20;UBERON:0010314,9.33e-08,132;UBERON:0000956,2.23e-07,25;UBERON:0000203,2.23e-07,25;UBERON:0002050,2.48e-07,564 | |||
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| ||
|short_description=p1@PORCN | |||
}} | }} |
Latest revision as of 18:50, 15 September 2015
Short description: | p1@PORCN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PORCN_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000355961, ENST00000359882, ENST00000367574, ENST00000472520, ENST00000485288, ENST00000486272, ENST00000489940, ENST00000491243, ENST00000528612, ENST00000537758, NM_022825, NM_203473, uc004djq.1, uc004djr.1, uc004djs.1, uc004djt.1, uc004dju.1, uc010nie.1, uc011mlx.1_5end |
EntrezGene: | PORCN |
HGNC: | 17652 |
UniProt: | B7ZAR3F8WEW7F2Z360C9JWI5Q9H237 |
Genome view: | ZENBU |
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CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 8.91e-15 | 171 |
ectoderm | 8.91e-15 | 171 |
presumptive ectoderm | 8.91e-15 | 171 |
nervous system | 2.40e-12 | 89 |
neural tube | 1.10e-11 | 56 |
neural rod | 1.10e-11 | 56 |
future spinal cord | 1.10e-11 | 56 |
neural keel | 1.10e-11 | 56 |
regional part of nervous system | 1.22e-11 | 53 |
regional part of brain | 1.22e-11 | 53 |
brain | 1.56e-11 | 68 |
future brain | 1.56e-11 | 68 |
central nervous system | 1.97e-11 | 81 |
ecto-epithelium | 6.52e-11 | 104 |
regional part of forebrain | 8.45e-10 | 41 |
forebrain | 8.45e-10 | 41 |
anterior neural tube | 8.45e-10 | 41 |
future forebrain | 8.45e-10 | 41 |
telencephalon | 1.03e-09 | 34 |
cerebral hemisphere | 2.04e-09 | 32 |
neurectoderm | 2.42e-09 | 86 |
regional part of telencephalon | 4.32e-09 | 32 |
brain grey matter | 5.28e-09 | 34 |
gray matter | 5.28e-09 | 34 |
regional part of cerebral cortex | 1.45e-08 | 22 |
neural plate | 2.28e-08 | 82 |
presumptive neural plate | 2.28e-08 | 82 |
neocortex | 5.14e-08 | 20 |
structure with developmental contribution from neural crest | 9.33e-08 | 132 |
cerebral cortex | 2.23e-07 | 25 |
pallium | 2.23e-07 | 25 |
embryonic structure | 2.48e-07 | 564 |