FFCP PHASE1:Hg19::chr20:33759854..33759916,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:33759854..33759916,+
|short_description=p1@PROCR
|description=CAGE_peak_1_at_PROCR_5end
|association_with_transcript=80bp_to_ENST00000216968,NM_006404,uc0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10544 | |EntrezGene=10544 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9452 | |HGNC=9452 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UNN8 | |UniProt=Q9UNN8 | ||
|association_with_transcript=80bp_to_ENST00000216968,NM_006404,uc002xbt.2_5end | |||
|cluster_id=chr20:33759854..33759916,+ | |||
|coexpression_cluster_id=C4027 | |||
|description=CAGE_peak_1_at_PROCR_5end | |||
|id=chr20:33759854..33759916,+ | |||
|ontology_enrichment_celltype=CL:0000222!1.87e-27!119;CL:0000220!1.84e-23!246;CL:0002321!3.38e-23!248;CL:0000055!1.10e-17!180;CL:0002139!5.80e-15!24;CL:0002078!1.03e-14!44;CL:0000115!1.14e-14!35;CL:0000183!1.63e-14!59;CL:0000213!1.02e-13!57;CL:0000215!1.02e-13!57;CL:0000680!1.32e-13!57;CL:0000056!1.32e-13!57;CL:0000355!1.32e-13!57;CL:0000187!1.65e-13!54;CL:0000071!5.94e-13!18;CL:0002546!5.94e-13!18;CL:0000066!2.38e-11!254;CL:0000192!2.92e-11!42;CL:0000514!2.92e-11!42;CL:0000393!6.78e-11!60;CL:0000211!6.78e-11!60;CL:0000076!5.72e-10!62;CL:0000359!6.71e-09!32;CL:0000057!1.39e-08!75;CL:0002371!3.21e-08!591;CL:0000144!3.24e-08!625;CL:1000413!1.58e-07!9;CL:1000497!2.06e-07!18;CL:0002518!2.06e-07!18;CL:0000548!5.17e-07!679;CL:0000004!5.17e-07!679;CL:0000255!5.17e-07!679 | |||
|ontology_enrichment_celltype_v019=CL:0002139;5.40e-15;24!CL:0000071;5.60e-13;18!CL:0000115;1.16e-12;36!CL:0002078;3.42e-10;45!CL:0000213;3.13e-09;58!CL:0000215;3.13e-09;58!CL:0000359;1.90e-08;32!CL:0000192;6.01e-08;43!CL:1000497;6.80e-08;17!CL:0002518;6.80e-08;17!CL:0000187;7.35e-08;55!CL:1000413;1.53e-07;9!CL:1000449;5.50e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.42e-27,121;CL:0002321,2.60e-23,250;CL:0002078,4.71e-15,45;CL:0000115,5.28e-15,36;CL:0002139,5.41e-15,24;CL:0000213,4.69e-14,58;CL:0000215,4.69e-14,58;CL:0000680,2.40e-13,58;CL:0000056,2.40e-13,58;CL:0000355,2.40e-13,58;CL:0000187,3.10e-13,55;CL:0000071,5.59e-13,18;CL:0002546,5.59e-13,18;CL:0000066,2.20e-11,253;CL:0000192,5.69e-11,43;CL:0000514,5.69e-11,43;CL:0000393,1.27e-10,61;CL:0000211,1.27e-10,61;CL:0000076,5.39e-10,63;CL:0000359,6.45e-09,32;CL:0000057,6.47e-09,76;CL:1000497,6.86e-08,17;CL:0002518,6.86e-08,17;CL:1000413,1.53e-07,9;CL:1000449,5.56e-07,15 | |||
|ontology_enrichment_development_v019=CL:0002546;5.60e-13;18!CL:0000222;6.16e-09;121!CL:0000514;6.01e-08;43!CL:0000355;1.36e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!5.21e-25!69;UBERON:0002049!5.98e-25!79;UBERON:0007798!5.98e-25!79;UBERON:0004872!8.76e-23!84;UBERON:0001981!1.31e-22!60;UBERON:0007500!1.31e-22!60;UBERON:0004537!1.31e-22!60;UBERON:0006965!1.31e-22!60;UBERON:0003914!5.23e-22!118;UBERON:0002100!1.75e-18!216;UBERON:0000486!7.02e-17!82;UBERON:0000490!3.23e-16!138;UBERON:0004535!5.61e-16!110;UBERON:0001009!1.45e-15!113;UBERON:0000468!1.59e-15!659;UBERON:0001637!2.48e-15!42;UBERON:0003509!2.48e-15!42;UBERON:0004572!2.48e-15!42;UBERON:0000914!1.25e-14!83;UBERON:0002329!1.25e-14!83;UBERON:0003077!1.25e-14!83;UBERON:0003059!1.25e-14!83;UBERON:0007282!1.25e-14!83;UBERON:0009618!1.25e-14!83;UBERON:0007285!1.25e-14!83;UBERON:0004290!1.68e-14!70;UBERON:0005256!2.86e-14!143;UBERON:0000119!7.77e-14!312;UBERON:0000467!8.75e-14!625;UBERON:0001134!9.15e-14!61;UBERON:0002036!9.15e-14!61;UBERON:0003082!9.15e-14!61;UBERON:0003104!1.16e-13!238;UBERON:0009142!1.16e-13!238;UBERON:0000483!1.42e-13!309;UBERON:0002385!1.59e-13!63;UBERON:0001015!1.59e-13!63;UBERON:0000383!1.59e-13!63;UBERON:0006914!1.69e-13!25;UBERON:0000480!1.86e-13!626;UBERON:0000926!2.68e-13!448;UBERON:0004120!2.68e-13!448;UBERON:0006603!2.68e-13!448;UBERON:0000487!3.38e-13!22;UBERON:0001986!5.94e-13!18;UBERON:0004638!5.94e-13!18;UBERON:0004852!5.94e-13!18;UBERON:0004573!1.41e-12!33;UBERON:0004571!1.41e-12!33;UBERON:0000475!8.98e-11!365;UBERON:0000922!1.01e-10!612;UBERON:0002050!1.67e-10!605;UBERON:0005423!1.67e-10!605;UBERON:0000923!2.17e-10!604;UBERON:0005291!2.17e-10!604;UBERON:0006598!2.17e-10!604;UBERON:0002532!2.17e-10!604;UBERON:0000481!3.10e-10!347;UBERON:0003103!1.08e-09!69;UBERON:0000464!1.74e-09!104;UBERON:0003886!2.46e-09!63;UBERON:0000947!2.89e-09!21;UBERON:0010191!2.89e-09!21;UBERON:0004111!3.68e-09!241;UBERON:0000477!3.30e-08!286;UBERON:0002553!4.54e-08!70;UBERON:0003915!1.58e-07!9;UBERON:0004700!1.58e-07!9;UBERON:0001917!1.58e-07!9;UBERON:0006554!2.60e-07!44;UBERON:0001008!3.23e-07!45;UBERON:0009569!3.94e-07!113;UBERON:0000466!5.84e-07!126;UBERON:0006555!9.32e-07!17;UBERON:0005103!9.32e-07!17;UBERON:0000083!9.32e-07!17;UBERON:0009201!9.32e-07!17;UBERON:0004819!9.32e-07!17;UBERON:0006553!9.32e-07!17;UBERON:0003074!9.32e-07!17;UBERON:0003060!9.32e-07!17 | |||
|ontology_enrichment_uberon_v019=UBERON:0006914;1.63e-13;25!UBERON:0000487;3.23e-13;22!UBERON:0004638;5.60e-13;18!UBERON:0001986;5.60e-13;18!UBERON:0004852;5.60e-13;18!UBERON:0003914;8.04e-13;74!UBERON:0007500;8.83e-13;56!UBERON:0001981;8.83e-13;56!UBERON:0004537;8.83e-13;56!UBERON:0000055;9.42e-13;65!UBERON:0001637;6.41e-12;42!UBERON:0003509;6.41e-12;42!UBERON:0004572;6.41e-12;42!UBERON:0004573;1.08e-11;33!UBERON:0004571;1.08e-11;33!UBERON:0000490;1.32e-11;33!UBERON:0002049;4.07e-10;75!UBERON:0007798;4.07e-10;75!UBERON:0000947;2.72e-09;21!UBERON:0010191;2.72e-09;21!UBERON:0000025;6.72e-09;93!UBERON:0003915;1.53e-07;9!UBERON:0004700;1.53e-07;9!UBERON:0001917;1.53e-07;9!UBERON:0006555;5.50e-07;15!UBERON:0004819;5.50e-07;15!UBERON:0001285;5.50e-07;15!UBERON:0007684;5.50e-07;15!UBERON:0006554;6.07e-07;30!UBERON:0001008;6.07e-07;30 | |||
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| ||
|short_description=p1@PROCR | |||
}} | }} |
Latest revision as of 19:25, 15 September 2015
Short description: | p1@PROCR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PROCR_5end |
Coexpression cluster: | C4027_Wilms_Endothelial_mesothelioma_Renal_mesenchymal_leiomyoma_Fibroblast |
Association with transcript: | 80bp_to_ENST00000216968, NM_006404, uc002xbt.2_5end |
EntrezGene: | PROCR |
HGNC: | 9452 |
UniProt: | Q9UNN8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.42e-27 | 121 |
embryonic cell | 2.60e-23 | 250 |
meso-epithelial cell | 4.71e-15 | 45 |
endothelial cell | 5.28e-15 | 36 |
endothelial cell of vascular tree | 5.41e-15 | 24 |
lining cell | 4.69e-14 | 58 |
barrier cell | 4.69e-14 | 58 |
muscle precursor cell | 2.40e-13 | 58 |
myoblast | 2.40e-13 | 58 |
multi-potent skeletal muscle stem cell | 2.40e-13 | 58 |
muscle cell | 3.10e-13 | 55 |
blood vessel endothelial cell | 5.59e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.59e-13 | 18 |
epithelial cell | 2.20e-11 | 253 |
smooth muscle cell | 5.69e-11 | 43 |
smooth muscle myoblast | 5.69e-11 | 43 |
electrically responsive cell | 1.27e-10 | 61 |
electrically active cell | 1.27e-10 | 61 |
squamous epithelial cell | 5.39e-10 | 63 |
vascular associated smooth muscle cell | 6.45e-09 | 32 |
fibroblast | 6.47e-09 | 76 |
kidney cell | 6.86e-08 | 17 |
kidney epithelial cell | 6.86e-08 | 17 |
endothelial cell of artery | 1.53e-07 | 9 |
epithelial cell of nephron | 5.56e-07 | 15 |