FFCP PHASE1:Hg19::chr4:142053952..142053977,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57484 | |EntrezGene=57484 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23138 | |HGNC=23138 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=18bp_to_ENST00000515673_5end | |association_with_transcript=18bp_to_ENST00000515673_5end | ||
|cluster_id=chr4:142053952..142053977,- | |||
|coexpression_cluster_id=C1935 | |||
|description=CAGE_peak_2_at_RNF150_5end | |description=CAGE_peak_2_at_RNF150_5end | ||
|id=chr4:142053952..142053977,- | |id=chr4:142053952..142053977,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.30e-07;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.46e-33!115;UBERON:0005743!7.44e-21!86;UBERON:0000073!1.55e-19!94;UBERON:0001016!1.55e-19!94;UBERON:0001017!1.95e-19!82;UBERON:0000955!2.46e-19!69;UBERON:0006238!2.46e-19!69;UBERON:0001049!4.84e-19!57;UBERON:0005068!4.84e-19!57;UBERON:0006241!4.84e-19!57;UBERON:0007135!4.84e-19!57;UBERON:0002346!1.79e-18!90;UBERON:0003075!2.64e-18!86;UBERON:0007284!2.64e-18!86;UBERON:0002616!1.04e-17!59;UBERON:0000153!5.38e-17!129;UBERON:0007811!5.38e-17!129;UBERON:0000033!1.32e-16!123;UBERON:0003080!4.69e-16!42;UBERON:0002780!1.35e-15!41;UBERON:0001890!1.35e-15!41;UBERON:0006240!1.35e-15!41;UBERON:0000924!3.35e-15!173;UBERON:0006601!3.35e-15!173;UBERON:0004121!7.19e-15!169;UBERON:0003056!6.47e-14!61;UBERON:0000481!5.80e-13!347;UBERON:0000475!2.16e-12!365;UBERON:0002020!4.60e-12!34;UBERON:0003528!4.60e-12!34;UBERON:0001893!5.14e-12!34;UBERON:0001869!8.97e-12!32;UBERON:0002791!1.14e-11!33;UBERON:0000062!7.00e-11!511;UBERON:0000468!1.58e-10!659;UBERON:0000956!8.71e-09!25;UBERON:0000203!8.71e-09!25;UBERON:0002619!2.90e-08!22;UBERON:0000477!5.75e-08!286;UBERON:0001950!2.33e-07!20;UBERON:0000467!5.21e-07!625;UBERON:0000480!6.98e-07!626 | |ontology_enrichment_uberon=UBERON:0007023!8.46e-33!115;UBERON:0005743!7.44e-21!86;UBERON:0000073!1.55e-19!94;UBERON:0001016!1.55e-19!94;UBERON:0001017!1.95e-19!82;UBERON:0000955!2.46e-19!69;UBERON:0006238!2.46e-19!69;UBERON:0001049!4.84e-19!57;UBERON:0005068!4.84e-19!57;UBERON:0006241!4.84e-19!57;UBERON:0007135!4.84e-19!57;UBERON:0002346!1.79e-18!90;UBERON:0003075!2.64e-18!86;UBERON:0007284!2.64e-18!86;UBERON:0002616!1.04e-17!59;UBERON:0000153!5.38e-17!129;UBERON:0007811!5.38e-17!129;UBERON:0000033!1.32e-16!123;UBERON:0003080!4.69e-16!42;UBERON:0002780!1.35e-15!41;UBERON:0001890!1.35e-15!41;UBERON:0006240!1.35e-15!41;UBERON:0000924!3.35e-15!173;UBERON:0006601!3.35e-15!173;UBERON:0004121!7.19e-15!169;UBERON:0003056!6.47e-14!61;UBERON:0000481!5.80e-13!347;UBERON:0000475!2.16e-12!365;UBERON:0002020!4.60e-12!34;UBERON:0003528!4.60e-12!34;UBERON:0001893!5.14e-12!34;UBERON:0001869!8.97e-12!32;UBERON:0002791!1.14e-11!33;UBERON:0000062!7.00e-11!511;UBERON:0000468!1.58e-10!659;UBERON:0000956!8.71e-09!25;UBERON:0000203!8.71e-09!25;UBERON:0002619!2.90e-08!22;UBERON:0000477!5.75e-08!286;UBERON:0001950!2.33e-07!20;UBERON:0000467!5.21e-07!625;UBERON:0000480!6.98e-07!626 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.11e-11;41!UBERON:0001890;2.11e-11;41!UBERON:0001869;4.35e-11;32!UBERON:0003528;1.55e-10;34!UBERON:0002020;1.55e-10;34!UBERON:0002791;2.42e-10;32!UBERON:0001893;2.94e-10;34!UBERON:0007023;7.31e-10;114!UBERON:0002619;1.30e-08;22!UBERON:0000073;2.47e-08;53!UBERON:0002616;2.47e-08;53!UBERON:0000956;6.19e-08;25!UBERON:0000203;6.19e-08;25!UBERON:0001017;1.51e-07;75!UBERON:0001950;2.11e-07;20!UBERON:0001737;2.43e-07;9!UBERON:0001557;2.43e-07;9!UBERON:0000922;9.07e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.21e-37,114;UBERON:0011216,4.71e-18,223;UBERON:0003075,5.06e-16,82;UBERON:0007284,5.06e-16,82;UBERON:0001049,9.35e-16,56;UBERON:0005068,9.35e-16,56;UBERON:0006241,9.35e-16,56;UBERON:0007135,9.35e-16,56;UBERON:0002780,1.21e-15,41;UBERON:0001890,1.21e-15,41;UBERON:0003080,1.21e-15,41;UBERON:0006240,1.21e-15,41;UBERON:0002346,2.30e-15,86;UBERON:0010314,7.32e-15,132;UBERON:0000073,2.68e-14,53;UBERON:0002616,2.68e-14,53;UBERON:0001017,2.79e-14,81;UBERON:0000955,3.91e-14,68;UBERON:0006238,3.91e-14,68;UBERON:0003056,1.66e-13,61;UBERON:0004121,2.02e-13,171;UBERON:0000924,2.02e-13,171;UBERON:0006601,2.02e-13,171;UBERON:0001016,3.73e-13,89;UBERON:0001869,5.39e-12,32;UBERON:0003528,7.85e-12,34;UBERON:0002020,7.85e-12,34;UBERON:0001893,8.96e-12,34;UBERON:0010371,1.56e-11,104;UBERON:0002791,6.09e-11,32;UBERON:0002619,8.14e-09,22;UBERON:0000956,4.67e-08,25;UBERON:0000203,4.67e-08,25;UBERON:0001737,1.16e-07,9;UBERON:0001950,1.33e-07,20 | |||
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| ||
|short_description=p2@RNF150 | |short_description=p2@RNF150 | ||
}} | }} |
Latest revision as of 20:16, 15 September 2015
Short description: | p2@RNF150 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RNF150_5end |
Coexpression cluster: | C1935_heart_pineal_mature_neuroblastoma_putamen_neuroectodermal_occipital |
Association with transcript: | 18bp_to_ENST00000515673_5end |
EntrezGene: | RNF150 |
HGNC: | 23138 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data