FFCP PHASE1:Hg19::chr4:144434584..144434709,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8467 | |EntrezGene=8467 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11101 | |HGNC=11101 | ||
|TSSclassifier=strong | |||
|UniProt=O60264,F5GZI1 | |UniProt=O60264,F5GZI1 | ||
|association_with_transcript=0bp_to_ENST00000283131,ENST00000535006,ENST00000536484,NM_003601,uc003ijg.2_5end | |association_with_transcript=0bp_to_ENST00000283131,ENST00000535006,ENST00000536484,NM_003601,uc003ijg.2_5end | ||
|cluster_id=chr4:144434584..144434709,+ | |||
|description=CAGE_peak_2_at_SMARCA5_5end | |description=CAGE_peak_2_at_SMARCA5_5end | ||
|id=chr4:144434584..144434709,+ | |id=chr4:144434584..144434709,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.93e-08;33!CL:0002057;2.93e-08;33 | |ontology_enrichment_celltype_v019=CL:0000860;2.93e-08;33!CL:0002057;2.93e-08;33 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.25e-23!94;UBERON:0001016!6.25e-23!94;UBERON:0005743!7.38e-23!86;UBERON:0001017!2.77e-22!82;UBERON:0001049!1.36e-18!57;UBERON:0005068!1.36e-18!57;UBERON:0006241!1.36e-18!57;UBERON:0007135!1.36e-18!57;UBERON:0000955!1.32e-17!69;UBERON:0006238!1.32e-17!69;UBERON:0002616!2.55e-17!59;UBERON:0002780!3.35e-16!41;UBERON:0001890!3.35e-16!41;UBERON:0006240!3.35e-16!41;UBERON:0003080!1.19e-15!42;UBERON:0002346!1.64e-14!90;UBERON:0003075!3.02e-14!86;UBERON:0007284!3.02e-14!86;UBERON:0003056!3.30e-13!61;UBERON:0000924!5.47e-13!173;UBERON:0006601!5.47e-13!173;UBERON:0002020!1.17e-12!34;UBERON:0003528!1.17e-12!34;UBERON:0004121!1.23e-12!169;UBERON:0001893!1.94e-12!34;UBERON:0002791!4.35e-12!33;UBERON:0000153!4.55e-12!129;UBERON:0007811!4.55e-12!129;UBERON:0000033!6.21e-12!123;UBERON:0001869!1.41e-11!32;UBERON:0000956!4.67e-09!25;UBERON:0000203!4.67e-09!25;UBERON:0007023!2.85e-08!115;UBERON:0002619!1.06e-07!22;UBERON:0001950!4.25e-07!20 | |ontology_enrichment_uberon=UBERON:0000073!6.25e-23!94;UBERON:0001016!6.25e-23!94;UBERON:0005743!7.38e-23!86;UBERON:0001017!2.77e-22!82;UBERON:0001049!1.36e-18!57;UBERON:0005068!1.36e-18!57;UBERON:0006241!1.36e-18!57;UBERON:0007135!1.36e-18!57;UBERON:0000955!1.32e-17!69;UBERON:0006238!1.32e-17!69;UBERON:0002616!2.55e-17!59;UBERON:0002780!3.35e-16!41;UBERON:0001890!3.35e-16!41;UBERON:0006240!3.35e-16!41;UBERON:0003080!1.19e-15!42;UBERON:0002346!1.64e-14!90;UBERON:0003075!3.02e-14!86;UBERON:0007284!3.02e-14!86;UBERON:0003056!3.30e-13!61;UBERON:0000924!5.47e-13!173;UBERON:0006601!5.47e-13!173;UBERON:0002020!1.17e-12!34;UBERON:0003528!1.17e-12!34;UBERON:0004121!1.23e-12!169;UBERON:0001893!1.94e-12!34;UBERON:0002791!4.35e-12!33;UBERON:0000153!4.55e-12!129;UBERON:0007811!4.55e-12!129;UBERON:0000033!6.21e-12!123;UBERON:0001869!1.41e-11!32;UBERON:0000956!4.67e-09!25;UBERON:0000203!4.67e-09!25;UBERON:0007023!2.85e-08!115;UBERON:0002619!1.06e-07!22;UBERON:0001950!4.25e-07!20 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;7.01e-12;41!UBERON:0001890;7.01e-12;41!UBERON:0001893;4.40e-11;34!UBERON:0000073;5.01e-11;53!UBERON:0002616;5.01e-11;53!UBERON:0003528;6.59e-11;34!UBERON:0002020;6.59e-11;34!UBERON:0002791;1.18e-10;32!UBERON:0001869;1.49e-10;32!UBERON:0000956;4.37e-09;25!UBERON:0000203;4.37e-09;25!UBERON:0001017;4.69e-09;75!UBERON:0000955;2.93e-08;68!UBERON:0001016;4.35e-08;83!UBERON:0002619;9.96e-08;22!UBERON:0001950;3.93e-07;20 | |ontology_enrichment_uberon_v019=UBERON:0002780;7.01e-12;41!UBERON:0001890;7.01e-12;41!UBERON:0001893;4.40e-11;34!UBERON:0000073;5.01e-11;53!UBERON:0002616;5.01e-11;53!UBERON:0003528;6.59e-11;34!UBERON:0002020;6.59e-11;34!UBERON:0002791;1.18e-10;32!UBERON:0001869;1.49e-10;32!UBERON:0000956;4.37e-09;25!UBERON:0000203;4.37e-09;25!UBERON:0001017;4.69e-09;75!UBERON:0000955;2.93e-08;68!UBERON:0001016;4.35e-08;83!UBERON:0002619;9.96e-08;22!UBERON:0001950;3.93e-07;20 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.01e-22,89;UBERON:0001017,1.04e-22,81;UBERON:0001049,4.34e-19,56;UBERON:0005068,4.34e-19,56;UBERON:0006241,4.34e-19,56;UBERON:0007135,4.34e-19,56;UBERON:0000955,5.24e-18,68;UBERON:0006238,5.24e-18,68;UBERON:0000073,1.19e-17,53;UBERON:0002616,1.19e-17,53;UBERON:0002346,2.74e-16,86;UBERON:0002780,3.35e-16,41;UBERON:0001890,3.35e-16,41;UBERON:0003080,3.35e-16,41;UBERON:0006240,3.35e-16,41;UBERON:0003075,4.66e-16,82;UBERON:0007284,4.66e-16,82;UBERON:0003056,7.11e-14,61;UBERON:0004121,1.41e-13,171;UBERON:0000924,1.41e-13,171;UBERON:0006601,1.41e-13,171;UBERON:0003528,1.17e-12,34;UBERON:0002020,1.17e-12,34;UBERON:0001893,1.94e-12,34;UBERON:0010371,4.01e-12,104;UBERON:0002791,1.21e-11,32;UBERON:0001869,1.41e-11,32;UBERON:0011216,2.91e-10,223;UBERON:0000956,4.67e-09,25;UBERON:0000203,4.67e-09,25;UBERON:0010314,6.13e-09,132;UBERON:0007023,5.99e-08,114;UBERON:0002619,1.06e-07,22;UBERON:0001950,4.25e-07,20 | |||
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| ||
|short_description=p2@SMARCA5 | |short_description=p2@SMARCA5 | ||
}} | }} |
Latest revision as of 21:53, 15 September 2015
Short description: | p2@SMARCA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SMARCA5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000283131, ENST00000535006, ENST00000536484, NM_003601, uc003ijg.2_5end |
EntrezGene: | SMARCA5 |
HGNC: | 11101 |
UniProt: | O60264F5GZI1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data