FFCP PHASE1:Hg19::chr11:117695449..117695466,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:117695449..117695466,-
|short_description=p1@FXYD2
|description=CAGE_peak_1_at_FXYD2_5end
|association_with_transcript=0bp_to_ENST00000292079,ENST00000317...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=486 | |EntrezGene=486 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4026 | |HGNC=4026 | ||
|UniProt=P54710, | |TSSclassifier=strong | ||
|UniProt=P54710,Q8N8W8 | |||
|association_with_transcript=0bp_to_ENST00000292079,ENST00000317594,ENST00000533281,ENST00000534383,NM_001680,uc001prj.2,uc001prl.2_5end | |||
|cluster_id=chr11:117695449..117695466,- | |||
|coexpression_cluster_id=C51 | |||
|description=CAGE_peak_1_at_FXYD2_5end | |||
|id=chr11:117695449..117695466,- | |||
|ontology_enrichment_celltype=CL:1000497!6.90e-27!18;CL:0002518!6.90e-27!18;CL:1000449!3.01e-22!16;CL:1000507!1.23e-21!12;CL:1000494!1.23e-21!12;CL:0002681!1.97e-15!13;CL:0002584!1.97e-15!13;CL:0000181!1.14e-09!12;CL:0000417!1.14e-09!12;CL:0000668!1.14e-09!12;CL:0000414!1.14e-09!12;CL:0000412!1.14e-09!12;CL:0000182!1.14e-09!12;CL:0000239!2.27e-09!3;CL:1000615!2.27e-09!3;CL:0002306!2.27e-09!3;CL:0002541!6.11e-08!3;CL:0000223!6.51e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:1000507;5.89e-37;10!CL:1000494;5.89e-37;10!CL:1000497;1.95e-35;17!CL:0002518;1.95e-35;17!CL:1000449;7.65e-29;15!CL:0002681;3.41e-19;12!CL:0002584;3.41e-19;12!CL:0000239;1.20e-12;3!CL:1000615;1.20e-12;3!CL:0002306;1.20e-12;3!CL:0000182;2.88e-10;12!CL:0000650;1.43e-08;2!CL:1000500;1.43e-08;2!CL:1000618;1.43e-08;2!CL:1001318;1.43e-08;2!CL:0002173;1.43e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,5.90e-37,10;CL:1000494,5.90e-37,10;CL:1000497,1.98e-35,17;CL:0002518,1.98e-35,17;CL:1000449,7.76e-29,15;CL:0002681,3.46e-19,12;CL:0002584,3.46e-19,12;CL:0000239,1.20e-12,3;CL:1000615,1.20e-12,3;CL:0002306,1.20e-12,3;CL:0000182,2.96e-10,12;CL:0000650,1.43e-08,2;CL:1000500,1.43e-08,2;CL:1000618,1.43e-08,2;CL:1001318,1.43e-08,2;CL:0002173,1.43e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.32e-16;11!UBERON:0009497;2.21e-13;13!UBERON:0003104;1.43e-12;31 | |||
|ontology_enrichment_disease=DOID:299!3.21e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:4468;8.42e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,8.42e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0005172!1.32e-33!55;UBERON:0005173!1.32e-33!55;UBERON:0002417!1.87e-29!61;UBERON:0000916!1.87e-29!61;UBERON:0002113!1.64e-25!27;UBERON:0003918!1.64e-25!27;UBERON:0005095!1.64e-25!27;UBERON:0007687!1.64e-25!27;UBERON:0006555!1.84e-24!17;UBERON:0005103!1.84e-24!17;UBERON:0000083!1.84e-24!17;UBERON:0009201!1.84e-24!17;UBERON:0004819!1.84e-24!17;UBERON:0006553!1.84e-24!17;UBERON:0003074!1.84e-24!17;UBERON:0003060!1.84e-24!17;UBERON:0000080!6.55e-23!18;UBERON:0002120!6.55e-23!18;UBERON:0004875!6.55e-23!18;UBERON:0005721!6.55e-23!18;UBERON:0005754!6.55e-23!18;UBERON:0007297!6.55e-23!18;UBERON:0004211!3.01e-22!16;UBERON:0001285!3.01e-22!16;UBERON:0007684!3.01e-22!16;UBERON:0003220!3.01e-22!16;UBERON:0004208!3.01e-22!16;UBERON:0003887!3.93e-22!21;UBERON:0009773!1.23e-21!12;UBERON:0001231!1.23e-21!12;UBERON:0004810!1.23e-21!12;UBERON:0000489!9.14e-21!32;UBERON:0004876!2.84e-20!20;UBERON:0005177!1.28e-19!107;UBERON:0006554!1.44e-15!44;UBERON:0009569!1.67e-15!113;UBERON:0001225!1.97e-15!13;UBERON:0008987!1.97e-15!13;UBERON:0001008!4.11e-15!45;UBERON:0000058!8.22e-15!26;UBERON:0000466!1.07e-13!126;UBERON:0001851!3.56e-12!16;UBERON:0002107!8.05e-12!19;UBERON:0006925!8.05e-12!19;UBERON:0008836!8.05e-12!19;UBERON:0003886!1.34e-11!63;UBERON:0005057!1.49e-11!26;UBERON:0000353!2.40e-11!17;UBERON:0003064!5.37e-11!37;UBERON:0009497!1.81e-10!25;UBERON:0000015!1.81e-10!25;UBERON:0002423!1.81e-10!25;UBERON:0006235!1.81e-10!25;UBERON:0004161!1.81e-10!25;UBERON:0007499!3.41e-10!25;UBERON:0002553!6.27e-10!70;UBERON:0008835!6.49e-10!22;UBERON:0003894!6.49e-10!22;UBERON:0009856!1.04e-09!26;UBERON:0009854!2.17e-09!23;UBERON:0006853!2.27e-09!3;UBERON:0007685!2.27e-09!3;UBERON:0004134!2.27e-09!3;UBERON:0003914!2.95e-08!118;UBERON:0003103!3.58e-08!69;UBERON:0000476!6.11e-08!3;UBERON:0000920!6.11e-08!3;UBERON:0000464!2.44e-07!104;UBERON:0003104!3.14e-07!238;UBERON:0009142!3.14e-07!238;UBERON:0002100!4.16e-07!216;UBERON:0003929!4.19e-07!54;UBERON:0000949!9.71e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;5.89e-37;10!UBERON:0009773;5.89e-37;10!UBERON:0001231;5.89e-37;10!UBERON:0004810;5.89e-37;10!UBERON:0002113;6.08e-33;24!UBERON:0011143;6.08e-33;24!UBERON:0006555;7.65e-29;15!UBERON:0004819;7.65e-29;15!UBERON:0001285;7.65e-29;15!UBERON:0007684;7.65e-29;15!UBERON:0000489;1.30e-26;29!UBERON:0005172;7.10e-26;52!UBERON:0005173;7.10e-26;52!UBERON:0006554;1.34e-25;30!UBERON:0001008;1.34e-25;30!UBERON:0001225;3.41e-19;12!UBERON:0008987;3.41e-19;12!UBERON:0002417;3.69e-17;58!UBERON:0000916;3.69e-17;58!UBERON:0001851;4.46e-15;15!UBERON:0000353;4.46e-15;15!UBERON:0002107;6.05e-14;19!UBERON:0006925;6.05e-14;19!UBERON:0002423;8.35e-13;25!UBERON:0006853;1.20e-12;3!UBERON:0007685;1.20e-12;3!UBERON:0004134;1.20e-12;3!UBERON:0003567;1.43e-08;2!UBERON:0003838;1.43e-08;2!UBERON:0003586;1.43e-08;2!UBERON:0005169;1.43e-08;2!UBERON:0002321;1.43e-08;2!UBERON:0005215;1.43e-08;2!UBERON:0002303;1.43e-08;2!UBERON:0002319;1.43e-08;2!UBERON:0005177;3.19e-08;99!UBERON:0005406;5.43e-08;2!UBERON:0002365;1.04e-07;31!UBERON:0002330;1.04e-07;31!UBERON:0002368;9.24e-07;33 | |||
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| ||
|short_description=p1@FXYD2 | |||
}} | }} |
Latest revision as of 22:08, 15 September 2015
Short description: | p1@FXYD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FXYD2_5end |
Coexpression cluster: | C51_kidney_mesothelioma_renal_signet_gall_lung_pancreas |
Association with transcript: | 0bp_to_ENST00000292079, ENST00000317594, ENST00000533281, ENST00000534383, NM_001680, uc001prj.2, uc001prl.2_5end |
EntrezGene: | FXYD2 |
HGNC: | 4026 |
UniProt: | P54710Q8N8W8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 5.90e-37 | 10 |
nephron tubule epithelial cell | 5.90e-37 | 10 |
kidney cell | 1.98e-35 | 17 |
kidney epithelial cell | 1.98e-35 | 17 |
epithelial cell of nephron | 7.76e-29 | 15 |
kidney cortical cell | 3.46e-19 | 12 |
renal cortical epithelial cell | 3.46e-19 | 12 |
brush border epithelial cell | 1.20e-12 | 3 |
kidney cortex tubule cell | 1.20e-12 | 3 |
epithelial cell of proximal tubule | 1.20e-12 | 3 |
hepatocyte | 2.96e-10 | 12 |
mesangial cell | 1.43e-08 | 2 |
kidney interstitial cell | 1.43e-08 | 2 |
juxtaglomerular complex cell | 1.43e-08 | 2 |
renal interstitial pericyte | 1.43e-08 | 2 |
extraglomerular mesangial cell | 1.43e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 8.42e-09 | 2 |