FFCP PHASE1:Hg19::chr2:102091144..102091183,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=731220 | |EntrezGene=731220 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=37253 | |HGNC=37253 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZV50,E9PDA6,D6RAX4 | |UniProt=Q6ZV50,E9PDA6,D6RAX4 | ||
|association_with_transcript=0bp_to_ENST00000428343,ENST00000481179,ENST00000484091,ENST00000540519,NM_001145664,uc002tbb.1,uc010yvx.1_5end | |association_with_transcript=0bp_to_ENST00000428343,ENST00000481179,ENST00000484091,ENST00000540519,NM_001145664,uc002tbb.1,uc010yvx.1_5end | ||
|cluster_id=chr2:102091144..102091183,- | |||
|description=CAGE_peak_2_at_RFX8_5end | |description=CAGE_peak_2_at_RFX8_5end | ||
|id=chr2:102091144..102091183,- | |id=chr2:102091144..102091183,- | ||
|ontology_enrichment_celltype=CL:0000055!5.38e-36!180;CL:0000057!9.57e-24!75;CL:0000680!9.44e-17!57;CL:0000056!9.44e-17!57;CL:0000355!9.44e-17!57;CL:0000048!2.75e-15!430;CL:0000187!3.68e-15!54;CL:0000723!3.41e-14!436;CL:0000034!3.76e-14!444;CL:0002620!1.13e-13!23;CL:0000183!6.20e-13!59;CL:0000393!1.56e-12!60;CL:0000211!1.56e-12!60;CL:0000192!5.63e-12!42;CL:0000514!5.63e-12!42;CL:0000359!4.25e-10!32;CL:0002539!2.04e-07!10 | |ontology_enrichment_celltype=CL:0000055!5.38e-36!180;CL:0000057!9.57e-24!75;CL:0000680!9.44e-17!57;CL:0000056!9.44e-17!57;CL:0000355!9.44e-17!57;CL:0000048!2.75e-15!430;CL:0000187!3.68e-15!54;CL:0000723!3.41e-14!436;CL:0000034!3.76e-14!444;CL:0002620!1.13e-13!23;CL:0000183!6.20e-13!59;CL:0000393!1.56e-12!60;CL:0000211!1.56e-12!60;CL:0000192!5.63e-12!42;CL:0000514!5.63e-12!42;CL:0000359!4.25e-10!32;CL:0002539!2.04e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0002620;8.46e-21;23!CL:0000359;4.46e-12;32!CL:0000057;5.59e-12;73!CL:0002539;1.06e-09;10!CL:0000192;1.26e-08;43!CL:0002570;4.35e-08;8!CL:0000187;7.05e-08;55!CL:0002556;1.34e-07;6!CL:0002320;5.02e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.97e-33,76;CL:0000048,1.42e-25,427;CL:0000723,1.11e-24,433;CL:0000034,1.58e-23,441;CL:0002620,1.34e-20,23;CL:0000680,4.04e-17,58;CL:0000056,4.04e-17,58;CL:0000355,4.04e-17,58;CL:0000187,7.56e-15,55;CL:0000393,1.95e-12,61;CL:0000211,1.95e-12,61;CL:0000359,2.58e-12,32;CL:0000134,2.75e-12,354;CL:0002320,4.74e-12,361;CL:0000192,1.07e-11,43;CL:0000514,1.07e-11,43;CL:0000219,6.03e-11,386;CL:0002539,8.09e-10,10;CL:0002570,3.89e-08,8;CL:0002556,9.30e-08,6;CL:0002552,9.42e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000355;2.76e-09;58!CL:0000514;1.26e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;7.47e-07;5!DOID:450;7.47e-07;5!DOID:66;7.47e-07;5!DOID:423;7.47e-07;5!DOID:0080000;7.47e-07;5!DOID:11722;7.47e-07;5 | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!5.84e-20!83;UBERON:0002329!5.84e-20!83;UBERON:0003077!5.84e-20!83;UBERON:0003059!5.84e-20!83;UBERON:0007282!5.84e-20!83;UBERON:0009618!5.84e-20!83;UBERON:0007285!5.84e-20!83;UBERON:0004290!1.80e-17!70;UBERON:0001134!6.39e-15!61;UBERON:0002036!6.39e-15!61;UBERON:0003082!6.39e-15!61;UBERON:0000486!1.05e-14!82;UBERON:0002385!1.87e-14!63;UBERON:0001015!1.87e-14!63;UBERON:0000383!1.87e-14!63;UBERON:0005256!4.22e-11!143;UBERON:0001637!6.44e-09!42;UBERON:0003509!6.44e-09!42;UBERON:0004572!6.44e-09!42;UBERON:0002199!7.33e-08!45;UBERON:0002416!7.33e-08!45;UBERON:0002204!1.62e-07!167;UBERON:0004237!2.04e-07!10;UBERON:0004695!2.04e-07!10;UBERON:0002111!2.04e-07!10;UBERON:0004178!2.04e-07!10;UBERON:0002097!2.26e-07!40;UBERON:0004573!3.04e-07!33;UBERON:0004571!3.04e-07!33 | |ontology_enrichment_uberon=UBERON:0000914!5.84e-20!83;UBERON:0002329!5.84e-20!83;UBERON:0003077!5.84e-20!83;UBERON:0003059!5.84e-20!83;UBERON:0007282!5.84e-20!83;UBERON:0009618!5.84e-20!83;UBERON:0007285!5.84e-20!83;UBERON:0004290!1.80e-17!70;UBERON:0001134!6.39e-15!61;UBERON:0002036!6.39e-15!61;UBERON:0003082!6.39e-15!61;UBERON:0000486!1.05e-14!82;UBERON:0002385!1.87e-14!63;UBERON:0001015!1.87e-14!63;UBERON:0000383!1.87e-14!63;UBERON:0005256!4.22e-11!143;UBERON:0001637!6.44e-09!42;UBERON:0003509!6.44e-09!42;UBERON:0004572!6.44e-09!42;UBERON:0002199!7.33e-08!45;UBERON:0002416!7.33e-08!45;UBERON:0002204!1.62e-07!167;UBERON:0004237!2.04e-07!10;UBERON:0004695!2.04e-07!10;UBERON:0002111!2.04e-07!10;UBERON:0004178!2.04e-07!10;UBERON:0002097!2.26e-07!40;UBERON:0004573!3.04e-07!33;UBERON:0004571!3.04e-07!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0002385;5.27e-10;31!UBERON:0001015;5.27e-10;31!UBERON:0000383;5.27e-10;31!UBERON:0004237;1.06e-09;10!UBERON:0004695;1.06e-09;10!UBERON:0002111;1.06e-09;10!UBERON:0004178;1.06e-09;10!UBERON:0002204;1.54e-09;70!UBERON:0004573;3.25e-09;33!UBERON:0004571;3.25e-09;33!UBERON:0000947;6.84e-08;21!UBERON:0010191;6.84e-08;21!UBERON:0001637;1.06e-07;42!UBERON:0003509;1.06e-07;42!UBERON:0004572;1.06e-07;42!UBERON:0001758;1.34e-07;6!UBERON:0003672;1.34e-07;6!UBERON:0002097;1.79e-07;41!UBERON:0002199;3.12e-07;46!UBERON:0002416;3.12e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,8.33e-19,71;UBERON:0003059,8.33e-19,71;UBERON:0007282,8.33e-19,71;UBERON:0004290,8.33e-19,71;UBERON:0009618,8.33e-19,71;UBERON:0003077,2.30e-18,72;UBERON:0007285,2.30e-18,72;UBERON:0007524,6.18e-18,73;UBERON:0007503,7.48e-17,78;UBERON:0000486,5.58e-16,83;UBERON:0001134,2.59e-15,62;UBERON:0002036,2.59e-15,62;UBERON:0003082,2.59e-15,62;UBERON:0002385,1.68e-14,64;UBERON:0001015,1.68e-14,64;UBERON:0000383,1.68e-14,64;UBERON:0002384,2.32e-12,371;UBERON:0001637,3.01e-12,42;UBERON:0003509,3.01e-12,42;UBERON:0004572,3.01e-12,42;UBERON:0002199,2.54e-11,46;UBERON:0002416,2.54e-11,46;UBERON:0002097,8.07e-11,41;UBERON:0002204,3.66e-10,167;UBERON:0004237,8.09e-10,10;UBERON:0004695,8.09e-10,10;UBERON:0002111,8.09e-10,10;UBERON:0004178,8.09e-10,10;UBERON:0005256,1.09e-09,122;UBERON:0003102,1.35e-09,99;UBERON:0004573,1.61e-09,33;UBERON:0004571,1.61e-09,33;UBERON:0007500,3.66e-08,59;UBERON:0001981,3.66e-08,59;UBERON:0004537,3.66e-08,59;UBERON:0006965,3.66e-08,59;UBERON:0000947,6.49e-08,21;UBERON:0010191,6.49e-08,21;UBERON:0001758,9.30e-08,6;UBERON:0003672,9.30e-08,6;UBERON:0004872,1.66e-07,83;UBERON:0000055,8.35e-07,68 | |||
|phase1_expression=0.54503513781167,0.428201047781966,0,0,0,0,0,0.631719873426831,0,0.737201809504527,0,0,0,0.990130823680373,0,4.70627602516243,4.82155622419182,5.84248072309899,3.90346239032406,0.492484232307152,0.612002073732759,0.313454721478088,0,0.410623275218653,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0.223915474239924,0,0,0,0,0,0,0.411167888021826,0.619412741790207,0,0,0,0,0,0,0.188242339542605,0.272906150057846,0.674170453335254,0,0,0.639337125799041,0,0,0,0,0,0.622822248995575,0,0.521482918420201,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0.560508562981536,0.263384084775077,0,0.393010762749165,0.205601498999509,0.167186495390678,0,0.473447805734733,0,0.891283655081389,0.589211814949674,1.55073726208535,0.270803863765016,0.25618263945135,0.520237390239513,0.328875809207352,0.552700035571697,0.289803085735052,0,0,0,1.24640276967323,0.383220493601921,0.68725489096526,0,0,0,0,0,0,0,0.473554504088034,0,0,0,0.144824403882799,0,0.670700859703636,0,3.2529523714611,0.50133791063589,1.59331170856906,0.795285947051099,1.94653948121054,0.189069634328136,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0.258416759169329,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,1.2663051166458,2.25095607382472,7.45775213946916,4.61068896857864,0,0,0,1.24484414159907,0.942974704487816,3.92308567472301,0,0,0.468642863667593,4.99456122928513,3.4228309292667,0.896692083310806,6.22402842811954,3.23745888736263,3.23036855415172,10.4118627339996,4.29920110591188,2.89312187292143,2.37600571456411,1.97813543422845,1.82032272387605,0.718618141816238,6.56510844420858,3.503318556415,7.20366700258876,3.95079858792754,1.5324389789951,1.50238058906597,1.47461838108027,7.35497506324334,2.13557388818567,1.05965950579781,9.90300617078528,3.29768093563004,2.06112432036503,2.23340227597908,14.1772119082664,3.31285817548075,6.05841058185875,1.56484827691909,1.45481451136931,6.39017266529906,3.32481924151213,1.3564847384839,0,0,0,0,0.397589304964456,0,0.207322110030741,0,0,0,1.92972281457866,0,3.25057549622385,0,0,0,0,0,0,0,0,0,0,0.738155454624648,1.40241773803446,0.4115740113314,0,0,0,0,5.29755719297581,0,0.343135620597051,0,0,0,0,0,3.11980435583874,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0.16798212819886,0,0.0895585227028483,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.66004457238855,0.387815147273333,0,2.535908257668,0,0,0.257207374262142,1.41849132023278,1.8649552531127,0,0,0,5.5375151329935,0.355391948742546,0,0.602878754119172,0.871533458600294,0.299918973546171,0,0,0,0,0,7.13184525203592,4.63300181336253,1.43833425785268,3.22309733831812,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0.36807447515742,0.500170521059677,2.98391526069709,0.207970861530807,1.78428988797162,0.157702415033935,0.937131319941706,0.601892199455438,0,3.10419213877515,5.31380478828349,1.47495334833363,3.99664626553181,0,0,0,0.215714200818617,0,0,0,0,0.744323423456331,0.61384789315225,0,0.128139149255701,0,0.160853921143607,1.48418066444991,6.16838775210622,10.6537035187876,20.4496618474385,10.3850885836724,7.66988497835731,0,0,0,1.14814448164607,0,0.917870904715969,0,0,0,0,0.105551628892876,1.13733384070897,0.170093705276516,0.215915916102139,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0.650060246036521,0,7.15363315361703,2.46477787383431,2.6095624703442,2.89456802217514,3.00776685631166,0.290033387828457,0.426133137080504,1.78064071293475,0,0,0.127612712494584,0,1.39453664789186,3.1481234683064,4.8792608911242,3.69640296211307,0.532306030317022,2.60979897622522,0.18532421910392,0,0,0,0.190630193923825,1.535386747868,0.855877976067841,3.18203247925937,3.13979456079692,0.539617372749944,0.274537029736055,0.117812402345686,0.808729926293264,0,2.94880919367287,0,15.1102363571396,2.11300293513511,0.682499557039929,0.141405431953713,2.26016233240486,0.551365343546124,0,1.31535265576129,2.31510213706675,1.9676842561399,1.21746226177622,4.3375289733965,4.7888252430481,2.29458163526482,0.0982490410131212,1.426684205925,4.25713276884717,1.05553817648832,1.64647446479951,0.379473173765715,0,0,0.670302275535787,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0.0711418433484141,4.3045093636782,1.59663497146253,0.383010740264733,0.211673582723883,0,0.280797178113459,1.59764275323235,0.156679895773023,0,0,2.72999727676289,2.01799707191048,1.27753871307098,1.03051603426729,2.15068535015921,1.78940886313933,1.33479313369527,2.73543333562856,0,0,0,0,0,0,0.439524537815682,0,0,4.83031449570902,0,0,0,0.994147647766298,0,1.78093928036649,1.6480387422676,0,0.398495976502139,0.276283915531148,0,2.45444838005172,0,0.311039587661807,1.43789361835723,0,0,0,0,1.11136990144637,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658156191461918,0,0,0.384751292518985,0.455768223388005,0,0,0,0,0.0915975934018623,0,1.02193298195737,0.627921025580099,0,0,0,0,0,0.158936578980379,0,0,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,0.234264445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| ||
|short_description=p2@RFX8 | |short_description=p2@RFX8 | ||
}} | }} |
Latest revision as of 00:07, 16 September 2015
Short description: | p2@RFX8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RFX8_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000428343, ENST00000481179, ENST00000484091, ENST00000540519, NM_001145664, uc002tbb.1, uc010yvx.1_5end |
EntrezGene: | RFX8 |
HGNC: | 37253 |
UniProt: | Q6ZV50E9PDA6D6RAX4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.97e-33 | 76 |
multi fate stem cell | 1.42e-25 | 427 |
somatic stem cell | 1.11e-24 | 433 |
stem cell | 1.58e-23 | 441 |
skin fibroblast | 1.34e-20 | 23 |
muscle precursor cell | 4.04e-17 | 58 |
myoblast | 4.04e-17 | 58 |
multi-potent skeletal muscle stem cell | 4.04e-17 | 58 |
muscle cell | 7.56e-15 | 55 |
electrically responsive cell | 1.95e-12 | 61 |
electrically active cell | 1.95e-12 | 61 |
vascular associated smooth muscle cell | 2.58e-12 | 32 |
mesenchymal cell | 2.75e-12 | 354 |
connective tissue cell | 4.74e-12 | 361 |
smooth muscle cell | 1.07e-11 | 43 |
smooth muscle myoblast | 1.07e-11 | 43 |
motile cell | 6.03e-11 | 386 |
aortic smooth muscle cell | 8.09e-10 | 10 |
mesenchymal stem cell of adipose | 3.89e-08 | 8 |
fibroblast of periodontium | 9.30e-08 | 6 |
fibroblast of gingiva | 9.42e-07 | 5 |