FFCP PHASE1:Hg19::chr2:102608415..102608430,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7850 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5994 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000464994,ENST00000493749_5end | |||
|cluster_id=chr2:102608415..102608430,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_IL1R2_5end | |||
|id=chr2:102608415..102608430,+ | |||
|ontology_enrichment_celltype=CL:0000766!8.52e-28!76;CL:0002057!2.49e-26!42;CL:0002009!6.50e-24!65;CL:0000860!2.18e-23!45;CL:0000557!6.06e-23!71;CL:0000738!2.23e-22!140;CL:0002194!2.40e-22!63;CL:0000576!2.40e-22!63;CL:0000040!2.40e-22!63;CL:0000559!2.40e-22!63;CL:0000839!7.94e-21!70;CL:0002087!3.53e-16!119;CL:0002031!5.84e-16!124;CL:0000763!1.02e-14!112;CL:0000049!1.02e-14!112;CL:0000037!3.83e-13!172;CL:0000566!3.83e-13!172;CL:0002032!4.40e-12!165;CL:0000837!4.40e-12!165;CL:0000988!5.78e-11!182;CL:0000094!9.52e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.29e-32;33!CL:0002057;2.29e-32;33!CL:0000473;2.42e-27;39!CL:0000234;2.42e-27;39!CL:0000576;7.89e-20;48!CL:0000766;2.67e-15;69!CL:0000094;1.27e-09;8!CL:0000763;4.65e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.57e-37,72;CL:0000473,6.49e-34,48;CL:0000234,6.49e-34,48;CL:0000860,2.49e-33,42;CL:0002057,2.49e-33,42;CL:0002009,3.23e-33,61;CL:0000557,3.85e-31,67;CL:0002194,4.35e-31,59;CL:0000576,4.35e-31,59;CL:0000040,4.35e-31,59;CL:0000559,4.35e-31,59;CL:0000839,2.15e-28,66;CL:0000738,1.25e-23,136;CL:0000763,9.72e-21,108;CL:0000049,9.72e-21,108;CL:0002087,6.61e-18,115;CL:0002031,2.27e-17,120;CL:0000037,7.36e-15,168;CL:0002032,7.79e-14,161;CL:0000837,7.79e-14,161;CL:0000988,4.80e-13,177;CL:0000094,1.23e-09,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.26e-24;42!UBERON:0004872;1.03e-07;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.58e-41!115;UBERON:0002390!4.36e-26!102;UBERON:0003061!4.36e-26!102;UBERON:0002193!1.57e-23!112;UBERON:0002371!5.67e-18!80;UBERON:0002405!4.72e-16!115;UBERON:0001474!2.60e-15!86;UBERON:0004765!6.36e-12!101;UBERON:0001434!6.36e-12!101;UBERON:0000062!6.77e-11!511;UBERON:0001049!1.56e-09!57;UBERON:0005068!1.56e-09!57;UBERON:0006241!1.56e-09!57;UBERON:0007135!1.56e-09!57;UBERON:0000479!2.43e-08!787;UBERON:0003080!5.89e-08!42;UBERON:0003081!1.02e-07!216;UBERON:0002780!1.05e-07!41;UBERON:0001890!1.05e-07!41;UBERON:0006240!1.05e-07!41;UBERON:0002616!1.73e-07!59;UBERON:0000178!1.85e-07!15;UBERON:0000179!1.85e-07!15;UBERON:0000463!1.85e-07!15;UBERON:0002050!1.97e-07!605;UBERON:0005423!1.97e-07!605;UBERON:0000922!2.47e-07!612;UBERON:0000923!3.71e-07!604;UBERON:0005291!3.71e-07!604;UBERON:0006598!3.71e-07!604;UBERON:0002532!3.71e-07!604;UBERON:0000467!8.49e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.49e-10;15!UBERON:0000179;9.49e-10;15!UBERON:0000463;9.49e-10;15!UBERON:0007023;3.96e-08;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.14e-37,98;UBERON:0003061,6.14e-37,98;UBERON:0007023,5.76e-35,114;UBERON:0002193,2.94e-34,108;UBERON:0002405,8.54e-26,93;UBERON:0002371,2.44e-25,76;UBERON:0001474,3.26e-22,82;UBERON:0004765,1.27e-19,90;UBERON:0001434,5.39e-16,100;UBERON:0003081,2.39e-14,203;UBERON:0000178,8.69e-10,15;UBERON:0000179,8.69e-10,15;UBERON:0000463,8.69e-10,15;UBERON:0002050,1.09e-08,564;UBERON:0005423,1.89e-08,581;UBERON:0000923,2.95e-08,560;UBERON:0010316,2.95e-08,560;UBERON:0005291,2.95e-08,560;UBERON:0006598,2.95e-08,560;UBERON:0010317,2.95e-08,560;UBERON:0002532,2.95e-08,560;UBERON:0000479,3.38e-08,773;UBERON:0000922,6.74e-08,592 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.164201178899891,0,1.57345710739562,4.60595277716655,5.10893206943051,0.919421224478927,0,0.369754010166788,0,8.24581548427045,0,12.1878989877013,5.61524452916397,3.90619567288533,0.447830948479849,2.59114932815184,1.28787783817093,18.7563728025638,10.9584023669755,8.49044214157357,63.2206980383462,44.4061319063572,66.8965761133424,59.264632818363,25.1037492398519,51.316643885823,140.65623774054,109.73239620925,90.735746018209,63.4376684258578,30.8383949565366,33.0343522134274,118.454466347539,60.3346570903056,61.376364076708,6.26717470354761,3.59034583718937,5.11469700639233,35.1153178740587,27.8018760098659,31.1411124497787,38.4410457842817,16.6874533894464,40.6143139598568,33.2969726448353,35.3546530548062,35.7602497808199,1.05627643155971,0.212604299965044,1.04829322754188,4.38081661471331,3.00353785683013,5.46466994770072,0,0,0,0,1.63841583378639,0,1.28019066769952,0,1.72425731986345,2.64417949113945,0.954053754535364,0.569212969109448,0,0,2.64342657158052,2.24203425192614,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59282707162048,0.651083453856419,0,1.50575119077773,0.127986611154418,1.24930726552346,4.02521328474829,4.92676798152628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,2.18577172975525,0.741568885568859,4.54366351116557,3.83085422058388,31.1121627614144,0.238490624305342,1.71598473234038,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1461.44482936594,1737.2555833845,0.436094052142534,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.8810856935739,4.63668405004419,22.6575630357313,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,2.53510069643662,0.982827216677626,4.13552934676983,0,0,0,0.219500570817251,19.1082980537953,42.6242843025315,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,2.21595305478658,4.44608103764552,6.09387765383786,1.87467667973554,0.503946384596579,0.708875486211932,0.0895585227028483,0.871901815541886,7.28427090413901,0,0,2.07328115540772,1.29707958075265,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57191197463259,13.0229185293946,0.823240336780769,0,0.355391948742546,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0,0.591092280605782,0.215627574859517,0.385029108839245,0,0,0,0,0,868.848147778732,655.163595656815,1416.88664043781,0,0.500170521059677,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,1.44737618286021,23.5128478892292,2.881644060693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,1.78413391131527,0.831076008928724,0,0,0,0,0,0,47.5019063696,0,0,2.87132768998086,7.15066270640173,0,0,0,0,0,0.214840489736547,0,0,0,0.330569830721956,1.53752053892085,0.893288987462089,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.239293992399,0,0,0.196498082026242,0,0,0,0,0,0,0.288666338176536,0.670302275535787,0,53.285391239657,0,0,0,0,45.6702848308952,19.8805673857018,50.6985996585005,35.4965345432106,41.1362273086194,60.3080179409227,44.2825778535254,37.2768832858307,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.42080263306008,0,0,0,3.34242278632766,0.593929361665277,0,0.994147647766298,1.82870241333667,0,0,0.211125408127993,2.59022384726391,3.86797481743607,0,0,1.10776324914963,0,0.359473404589307,0,0,1.67693789582787,16.7638164642858,0,0,1.20598527610407,0,0,0,0.724999575434793,0.1137934482855,0,0,0,0,0,2.65722415744152,1.20596438625408,1.52581736317083,1.99042667876204,0,0.219385397153973,0,0,11.2347377415544,0,0,0,0,34.4521252510473,3.84709892287822,22.3874605927827,0,0,0,0,0,0,0,0,0,0,0,0,10.9478812418636,3.09601475761687,12.2206028986725,0,0,0,0.471807930864739,0,0,0,0,0,0,2.41981432097328,0,26.2224305458225,0,0,0,0,0,0,1.70765727617876,0,26.554639965275,0.293977192243133,0,0.873633341210151,0,0,0,0,20.4646824790565,0,0.90392296312213,0,0,0.0633107959558787,0.391102765469606,0.160317640503067,3.84215390530835,0,1.15272333723285,0,0,0,0,0,0,0,0,0,2.40168115483916,3.42263447229983,0,0,0,1.39641200636127,0,7.17873024576814,10.1836290254485,9.44297305900456,27.2269178079084,11.0852729603098,0,0,0,0,0,0,0,1.59045937961861,1.90684768556206,0,0,0,132.959569906937,33.2734840459918,0.121499113316049,0,5.91042804743986,4.40618540333984,0,0,0,1.42939065274673,23.1732189627901,0,0,0,0,0,0,0,0,3.95691030930823,10.6005511129777,2.71494208359256,1.85125642439766,0,0,54.9955174723628,9.58946261107962,3.31391244277756,121.064509322116,0,0,0,0,0.2506898940227,2.45076461410769,0.655745261419609,0,1.77213635993397,0.610131324509816,2.8793914062495,1.14681839138014,4.10437490686353,3.04272374412779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07387654227596,0.194860308839388,0,0.163565394255844,0,0,9.72035767449684,0,0.213383459388282,0,0,0,0.419638523158333,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,1.41696576325585,2.71377560397157,0,0,0.207471757392654,0,0,0.0981477185010256,0,0,0,0,0,0,3.83572674581212,0,1.56302802246618,0,0,0.147856086217045,0.270150338473579,0,2.68692835451539,0.19024743058172,0,0.548257766857182,7.44316767583941,0,0,2.14280734351315,1.3451348888753,1.21393120847326,3.87025725297206,26.9655205294422,0,0,0.543757863814654,0.263091094251396,0,0,0.78493092850514,1.25692471932802,0,1.82631744101899,0,0,3.14496794377288,0,0,0,0,0.414432328326074,0,0,0.860454717640555,0,0,0.846774100381858,1.8328549483524,0,0,0.111855431797792,0.098150233615243,0.121917924982269,4.53200186031526,2.56657017140618,0,7.28566489588709,0,0,0,0.22589216407792,0,0,3.24131464053368,0,0,1.47088993052343,0,0.785233868459781,8.91139200981258,0,0,75.8450218097418,48.3434159801829,7.39564553844474,0.178553938605658,0,0,8.76403665895821,0,16.0540333129625,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,3.48582011803901,0,2.48750831837634,1.65492793379032,13.6469748416628,1.66645102024618,1.35636710655613,19.1810867174201,0.112131862580613,2.67318064768293,0.404234377916439,12.6275713780238,4.79126621519393,37.3130373700815,13.5554968192158,3.65926392200615,0.488419611665847,0,0,0,14.0784565442073,1.4668973301944,5.69654649642034,14.6466490320813,2.21401172950129,0.961705476909699 | |||
|short_description=p1@IL1R2 | |||
}} |
Latest revision as of 00:55, 16 September 2015
Short description: | p1@IL1R2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IL1R2_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000464994, ENST00000493749_5end |
EntrezGene: | IL1R2 |
HGNC: | 5994 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.57e-37 | 72 |
defensive cell | 6.49e-34 | 48 |
phagocyte | 6.49e-34 | 48 |
classical monocyte | 2.49e-33 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.49e-33 | 42 |
macrophage dendritic cell progenitor | 3.23e-33 | 61 |
granulocyte monocyte progenitor cell | 3.85e-31 | 67 |
monopoietic cell | 4.35e-31 | 59 |
monocyte | 4.35e-31 | 59 |
monoblast | 4.35e-31 | 59 |
promonocyte | 4.35e-31 | 59 |
myeloid lineage restricted progenitor cell | 2.15e-28 | 66 |
leukocyte | 1.25e-23 | 136 |
myeloid cell | 9.72e-21 | 108 |
common myeloid progenitor | 9.72e-21 | 108 |
nongranular leukocyte | 6.61e-18 | 115 |
hematopoietic lineage restricted progenitor cell | 2.27e-17 | 120 |
hematopoietic stem cell | 7.36e-15 | 168 |
hematopoietic oligopotent progenitor cell | 7.79e-14 | 161 |
hematopoietic multipotent progenitor cell | 7.79e-14 | 161 |
hematopoietic cell | 4.80e-13 | 177 |
granulocyte | 1.23e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.14e-37 | 98 |
blood island | 6.14e-37 | 98 |
adult organism | 5.76e-35 | 114 |
hemolymphoid system | 2.94e-34 | 108 |
immune system | 8.54e-26 | 93 |
bone marrow | 2.44e-25 | 76 |
bone element | 3.26e-22 | 82 |
skeletal element | 1.27e-19 | 90 |
skeletal system | 5.39e-16 | 100 |
lateral plate mesoderm | 2.39e-14 | 203 |
blood | 8.69e-10 | 15 |
haemolymphatic fluid | 8.69e-10 | 15 |
organism substance | 8.69e-10 | 15 |
embryonic structure | 1.09e-08 | 564 |
developing anatomical structure | 1.89e-08 | 581 |
germ layer | 2.95e-08 | 560 |
germ layer / neural crest | 2.95e-08 | 560 |
embryonic tissue | 2.95e-08 | 560 |
presumptive structure | 2.95e-08 | 560 |
germ layer / neural crest derived structure | 2.95e-08 | 560 |
epiblast (generic) | 2.95e-08 | 560 |
tissue | 3.38e-08 | 773 |
embryo | 6.74e-08 | 592 |