FFCP PHASE1:Hg19::chr12:94542382..94542399,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:94542382..94542399,+ to FFCP PHASE1:Hg19::chr12:94542382..94542399,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10154 | |EntrezGene=10154 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9106 | |HGNC=9106 | ||
|TSSclassifier=strong | |||
|UniProt=O60486 | |UniProt=O60486 | ||
|association_with_transcript=-99bp_to_ENST00000258526,NM_005761,uc001tdc.2_5end | |||
|cluster_id=chr12:94542382..94542399,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_6_at_PLXNC1_5end | |||
|id=chr12:94542382..94542399,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.05e-47!140;CL:0000037!8.13e-42!172;CL:0000566!8.13e-42!172;CL:0000988!4.23e-39!182;CL:0002032!8.49e-39!165;CL:0000837!8.49e-39!165;CL:0002087!4.83e-38!119;CL:0002031!3.39e-35!124;CL:0000766!6.94e-35!76;CL:0002009!4.04e-32!65;CL:0002194!1.46e-30!63;CL:0000576!1.46e-30!63;CL:0000040!1.46e-30!63;CL:0000559!1.46e-30!63;CL:0000763!2.28e-30!112;CL:0000049!2.28e-30!112;CL:0000557!2.86e-30!71;CL:0002057!5.10e-30!42;CL:0000860!7.68e-27!45;CL:0000839!1.25e-26!70;CL:0000945!1.12e-09!24;CL:0000826!1.12e-09!24;CL:0002393!2.30e-09!9;CL:0002397!2.30e-09!9;CL:0000094!1.09e-08!8;CL:0000838!2.29e-08!52;CL:0000542!4.99e-08!53;CL:0000051!4.99e-08!53;CL:0000219!2.09e-07!390;CL:0000134!5.41e-07!358;CL:0000451!9.60e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.79e-33;39!CL:0000234;1.79e-33;39!CL:0000576;4.87e-31;48!CL:0000766;1.24e-29;69!CL:0000860;1.84e-28;33!CL:0002057;1.84e-28;33!CL:0000763;3.09e-15;100!CL:0002087;4.64e-14;104!CL:0000235;6.77e-14;6!CL:0000094;1.12e-13;8!CL:0002393;4.95e-13;6!CL:0002397;4.95e-13;6!CL:0000738;3.35e-12;136!CL:0000081;1.40e-09;11!CL:0000775;2.23e-08;3!CL:0002619;3.66e-08;3!CL:0000148;1.95e-07;10!CL:0000988;4.62e-07;177!CL:0000875;7.72e-07;3!CL:0002396;7.72e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,8.54e-63,72;CL:0000473,1.42e-58,48;CL:0000234,1.42e-58,48;CL:0002009,8.77e-57,61;CL:0002194,5.39e-56,59;CL:0000576,5.39e-56,59;CL:0000040,5.39e-56,59;CL:0000559,5.39e-56,59;CL:0000557,5.02e-53,67;CL:0000738,1.71e-51,136;CL:0000763,1.47e-50,108;CL:0000049,1.47e-50,108;CL:0000839,9.48e-49,66;CL:0000860,1.16e-46,42;CL:0002057,1.16e-46,42;CL:0000037,1.82e-44,168;CL:0002032,5.62e-44,161;CL:0000837,5.62e-44,161;CL:0002087,2.94e-42,115;CL:0000988,2.94e-41,177;CL:0002031,2.29e-38,120;CL:0002393,1.34e-18,9;CL:0002397,1.34e-18,9;CL:0000235,8.09e-14,6;CL:0000094,8.87e-14,8;CL:0000219,1.70e-13,386;CL:0000134,3.19e-12,354;CL:0002320,1.19e-11,361;CL:0000081,1.19e-09,11;CL:0000775,2.24e-08,3;CL:0002619,3.82e-08,3;CL:0000148,2.62e-07,10;CL:0000541,2.62e-07,10;CL:0000048,2.79e-07,427;CL:0000875,5.28e-07,3;CL:0002396,5.28e-07,3;CL:0000034,5.47e-07,441;CL:0000723,5.83e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;3.03e-33;42!CL:0000049;1.10e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.88e-39!102;UBERON:0003061!3.88e-39!102;UBERON:0002193!2.24e-35!112;UBERON:0002371!1.63e-26!80;UBERON:0001474!4.55e-23!86;UBERON:0002405!7.19e-21!115;UBERON:0004765!4.42e-17!101;UBERON:0001434!4.42e-17!101;UBERON:0000178!9.00e-11!15;UBERON:0000179!9.00e-11!15;UBERON:0000463!9.00e-11!15;UBERON:0007023!2.94e-10!115;UBERON:0003081!6.11e-08!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.73e-14;15!UBERON:0000179;1.73e-14;15!UBERON:0000463;1.73e-14;15!UBERON:0002390;3.49e-10;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.44e-61,98;UBERON:0003061,4.44e-61,98;UBERON:0002193,3.19e-56,108;UBERON:0002371,3.26e-45,76;UBERON:0002405,2.09e-42,93;UBERON:0001474,5.90e-41,82;UBERON:0004765,3.67e-36,90;UBERON:0001434,2.98e-31,100;UBERON:0003081,5.21e-22,203;UBERON:0000178,9.51e-15,15;UBERON:0000179,9.51e-15,15;UBERON:0000463,9.51e-15,15;UBERON:0002204,9.83e-14,167;UBERON:0002384,7.10e-11,371;UBERON:0000926,2.63e-09,315;UBERON:0004120,2.63e-09,315;UBERON:0006603,2.63e-09,315;UBERON:0002106,7.22e-07,3;UBERON:0004854,7.22e-07,3;UBERON:0009034,7.22e-07,3;UBERON:0002095,7.22e-07,3;UBERON:0004782,7.22e-07,3;UBERON:0003281,7.22e-07,3;UBERON:0009664,7.22e-07,3;UBERON:0002296,7.22e-07,3;UBERON:0005602,7.22e-07,3;UBERON:0001179,7.22e-07,3;UBERON:0006293,7.22e-07,3 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,1.29902789771517,0.903106483949403,0.944529375764151,1.96682138424452,0.767658796194425,1.23852898652861,0,0,0,0.154934401160603,0,0.293600439334847,7.75593571944628,8.82395568868623,6.72733699219141,6.71746422719773,7.12566065241755,7.7272670290256,2.32637182047304,1.13362783106643,1.69808842831471,2.09186133215116,2.05583944010913,1.23882548358041,2.01384674625505,0.256160706529101,0.709446689665756,5.5159308917859,3.22742341791913,1.35426486594342,2.07066573496865,0.818718450173537,0.674170453335254,5.81559395504715,4.17207735198922,3.19668562899521,0.329851300186716,0.398927315243264,0,3.19230162491442,6.24123747160254,6.85104473895132,0.502497330513487,1.0429658368404,0,3.63239701580021,2.20966581592539,1.58231193720442,1.90129757680748,1.70083439972035,2.30624510059213,1.46027220490444,1.35159203557356,2.73233497385036,2.56511469367124,2.38700012638908,1.82664153764634,0,1.09227722252426,0.889509253863555,0.426730222566507,0.400395987036012,1.14950487990897,0.661044872784862,1.90810750907073,1.1384259382189,1.17447437874188,1.91136614062614,0,1.68152568894461,0.263384084775077,0,0,0,0.167186495390678,0,0,0,0.445641827540694,0,0.221533894583621,0.270803863765016,0,0,0.328875809207352,0.276350017785848,0.289803085735052,0,0,0,0,0,0.68725489096526,0.506039384039006,0,0,0,0.150575119077773,0.127986611154418,1.24930726552346,1.18388626022008,0,0.403213486449465,0.534880391567015,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0.348259474598534,0.531831842075461,1.66943437013739,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.7670626154095,38.7780264148325,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0.741800787835671,0,0,0,0,0,0,0,0,0.113432183160021,0.538168907066586,0.213557388818567,0,0,0,0,0.18611685633159,0,0,0,0.276149695926898,0,0.710019185033229,0,0,0,0,0,0.121973706129595,0,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.66299114001014,6.31811515875942,3.56714789492948,0,0,0,0,0,0,0,0,0,0.720599767084807,0,4.19086102328316,1.14596527667483,3.51652341630141,0,1.13110241973656,6.9078903304101,6.85983438313388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64871341923571,3.01354254859276,6.32501818449095,0,0,0,0,0,0,0.112085143993527,0,0,0.128343036279748,0.254094624222463,0,0,0.167516265334349,0,26.9642528620986,44.8742188806037,31.0811635077027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,1.94142780736755,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767693373934002,0.42793898803392,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,3.04468565539302,2.29391162142713,3.98753031021914,1.19115887728894,1.64544909234478,1.94541993357815,2.70015718619057,3.96562588147135,0,0,0,0,0.432807638929335,0.213425530045242,0.318852545457645,0,0.191505370132367,0.211673582723883,0,0.280797178113459,0,0,0,0,0.321176150207399,0,0,2.06103206853459,0,0,0,0.19538809540204,0,0,0,0,1.4098700508785,0,0.293016358543788,0,0.557216921387392,0,0,0,0,0.994147647766298,0,0,0,0.422250816255987,0.19924798825107,0.276283915531148,0.251932747854276,0,1.96935688737711,0.311039587661807,0,0,0,0.0986434056369336,2.3948309234694,0,0,0,3.99227596002388,0,0,0,0,0,0,0,0,0.173624994933292,0,0.120596438625408,0,0.110579259931225,0,0.219385397153973,0,0,0.384751292518985,0.227884111694002,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0.794682894901893,0,0,0,0,0,0.619202951523374,0.611030144933625,0,0.617819694732514,0.417687798021821,0,0,0,0.182454789215666,0,0,0,0,0,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.290967049465258,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0.514784993585894,0,0,0,0,0,0.101998217636322,0,0,0.136905378891993,1.27746588066972,0,1.05154941711726,0,0,0,0,0,0,0.134366944973453,0,0,0.0787831823072236,0.0824158583811665,0,0,0.592713324460491,0,0.136203406111576,0.160753148465019,0,0,0.899895566206002,5.41661368190565,0.182248669974074,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0,0,0,0,2.9553307469762,0,0,0.293104467356165,0,0.129282956361551,0.39669780522807,0,0,0.961086713109252,1.25763444079733,0.414239055347196,3.96932817449561,2.17372795087739,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,1.55888247071511,0.797189041880179,2.28991551958182,0,0,0,0.59996218756479,0,0.861074898304078,0,0,0,0,0.127894371303652,0,0,0.109209638192014,0,0,0,0,0.318004350653419,1.89268188003008,0,0,0.3062454773532,0.0642292250964595,0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| ||
|short_description=p6@PLXNC1 | |||
}} | }} |
Latest revision as of 00:55, 16 September 2015
Short description: | p6@PLXNC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PLXNC1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -99bp_to_ENST00000258526, NM_005761, uc001tdc.2_5end |
EntrezGene: | PLXNC1 |
HGNC: | 9106 |
UniProt: | O60486 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.44e-61 | 98 |
blood island | 4.44e-61 | 98 |
hemolymphoid system | 3.19e-56 | 108 |
bone marrow | 3.26e-45 | 76 |
immune system | 2.09e-42 | 93 |
bone element | 5.90e-41 | 82 |
skeletal element | 3.67e-36 | 90 |
skeletal system | 2.98e-31 | 100 |
lateral plate mesoderm | 5.21e-22 | 203 |
blood | 9.51e-15 | 15 |
haemolymphatic fluid | 9.51e-15 | 15 |
organism substance | 9.51e-15 | 15 |
musculoskeletal system | 9.83e-14 | 167 |
connective tissue | 7.10e-11 | 371 |
mesoderm | 2.63e-09 | 315 |
mesoderm-derived structure | 2.63e-09 | 315 |
presumptive mesoderm | 2.63e-09 | 315 |
spleen | 7.22e-07 | 3 |
gastrointestinal system mesentery | 7.22e-07 | 3 |
stomach region | 7.22e-07 | 3 |
mesentery | 7.22e-07 | 3 |
gastrointestinal system serosa | 7.22e-07 | 3 |
mesentery of stomach | 7.22e-07 | 3 |
gut mesentery | 7.22e-07 | 3 |
dorsal mesentery | 7.22e-07 | 3 |
dorsal mesogastrium | 7.22e-07 | 3 |
peritoneal cavity | 7.22e-07 | 3 |
spleen primordium | 7.22e-07 | 3 |