FFCP PHASE1:Hg19::chr16:28857588..28857609,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7284 | |EntrezGene=7284 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12420 | |HGNC=12420 | ||
|TSSclassifier=strong | |||
|UniProt=P49411 | |UniProt=P49411 | ||
|association_with_transcript=119bp_to_ENST00000313511,NM_003321,uc002drh.2_5end | |association_with_transcript=119bp_to_ENST00000313511,NM_003321,uc002drh.2_5end | ||
|cluster_id=chr16:28857588..28857609,- | |||
|description=CAGE_peak_4_at_TUFM_5end | |description=CAGE_peak_4_at_TUFM_5end | ||
|id=chr16:28857588..28857609,- | |id=chr16:28857588..28857609,- | ||
|ontology_enrichment_celltype=CL:0000066!1.29e-09!254 | |ontology_enrichment_celltype=CL:0000066!1.29e-09!254 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.29e-09,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!1.11e-16!347;UBERON:0000483!4.57e-14!309;UBERON:0000119!1.82e-13!312;UBERON:0003104!1.74e-12!238;UBERON:0009142!1.74e-12!238;UBERON:0000025!6.89e-12!194;UBERON:0004111!1.51e-10!241;UBERON:0000475!2.28e-10!365;UBERON:0002100!1.26e-09!216;UBERON:0009569!1.41e-09!113;UBERON:0008947!4.42e-09!38;UBERON:0003258!4.42e-09!38;UBERON:0000477!7.06e-09!286;UBERON:0000922!7.82e-09!612;UBERON:0000923!1.40e-08!604;UBERON:0005291!1.40e-08!604;UBERON:0006598!1.40e-08!604;UBERON:0002532!1.40e-08!604;UBERON:0003914!1.41e-08!118;UBERON:0002050!2.55e-08!605;UBERON:0005423!2.55e-08!605;UBERON:0000064!2.57e-08!219;UBERON:0001041!3.34e-08!98;UBERON:0004921!3.43e-08!129;UBERON:0004185!3.43e-08!129;UBERON:0003103!1.04e-07!69;UBERON:0005177!1.13e-07!107;UBERON:0000065!1.34e-07!53;UBERON:0000915!1.50e-07!52;UBERON:0000468!2.29e-07!659;UBERON:0001737!3.95e-07!9;UBERON:0005256!5.99e-07!143;UBERON:0001004!9.23e-07!72;UBERON:0000072!9.45e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0000072;2.62e-08;37!UBERON:0000065;4.03e-08;44!UBERON:0001737;3.61e-07;9!UBERON:0001557;3.61e-07;9!UBERON:0000353;3.98e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000483,2.56e-15,306;UBERON:0000119,1.10e-14,309;UBERON:0000025,4.48e-12,192;UBERON:0004111,9.53e-11,240;UBERON:0002100,1.73e-09,199;UBERON:0009569,2.50e-09,112;UBERON:0000922,3.64e-09,592;UBERON:0008947,4.41e-09,38;UBERON:0003258,4.41e-09,38;UBERON:0001041,7.76e-09,87;UBERON:0005423,9.49e-09,581;UBERON:0004921,1.26e-08,118;UBERON:0003914,1.31e-08,117;UBERON:0011216,2.73e-08,223;UBERON:0003103,9.28e-08,68;UBERON:0002050,1.25e-07,564;UBERON:0000065,1.62e-07,54;UBERON:0000923,1.79e-07,560;UBERON:0010316,1.79e-07,560;UBERON:0005291,1.79e-07,560;UBERON:0006598,1.79e-07,560;UBERON:0010317,1.79e-07,560;UBERON:0002532,1.79e-07,560;UBERON:0005177,2.01e-07,101;UBERON:0003104,2.92e-07,160;UBERON:0009142,2.92e-07,160;UBERON:0000915,3.33e-07,52;UBERON:0001737,3.95e-07,9;UBERON:0000353,6.23e-07,15;UBERON:0004119,7.07e-07,160;UBERON:0000925,7.07e-07,160;UBERON:0006595,7.07e-07,160;UBERON:0001004,9.78e-07,74 | |||
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| ||
|short_description=p4@TUFM | |short_description=p4@TUFM | ||
}} | }} |
Latest revision as of 01:14, 16 September 2015
Short description: | p4@TUFM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TUFM_5end |
Coexpression cluster: | NA |
Association with transcript: | 119bp_to_ENST00000313511, NM_003321, uc002drh.2_5end |
EntrezGene: | TUFM |
HGNC: | 12420 |
UniProt: | P49411 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.29e-09 | 253 |
Ontology term | p-value | n |
---|---|---|
epithelium | 2.56e-15 | 306 |
cell layer | 1.10e-14 | 309 |
tube | 4.48e-12 | 192 |
anatomical conduit | 9.53e-11 | 240 |
trunk | 1.73e-09 | 199 |
subdivision of trunk | 2.50e-09 | 112 |
embryo | 3.64e-09 | 592 |
respiratory primordium | 4.41e-09 | 38 |
endoderm of foregut | 4.41e-09 | 38 |
foregut | 7.76e-09 | 87 |
developing anatomical structure | 9.49e-09 | 581 |
subdivision of digestive tract | 1.26e-08 | 118 |
epithelial tube | 1.31e-08 | 117 |
organ system subdivision | 2.73e-08 | 223 |
compound organ | 9.28e-08 | 68 |
embryonic structure | 1.25e-07 | 564 |
respiratory tract | 1.62e-07 | 54 |
germ layer | 1.79e-07 | 560 |
germ layer / neural crest | 1.79e-07 | 560 |
embryonic tissue | 1.79e-07 | 560 |
presumptive structure | 1.79e-07 | 560 |
germ layer / neural crest derived structure | 1.79e-07 | 560 |
epiblast (generic) | 1.79e-07 | 560 |
trunk region element | 2.01e-07 | 101 |
mesenchyme | 2.92e-07 | 160 |
entire embryonic mesenchyme | 2.92e-07 | 160 |
thoracic segment of trunk | 3.33e-07 | 52 |
larynx | 3.95e-07 | 9 |
parenchyma | 6.23e-07 | 15 |
endoderm-derived structure | 7.07e-07 | 160 |
endoderm | 7.07e-07 | 160 |
presumptive endoderm | 7.07e-07 | 160 |
respiratory system | 9.78e-07 | 74 |