FFCP PHASE1:Hg19::chr5:14871866..14871916,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:14871866..14871916,- to FFCP PHASE1:Hg19::chr5:14871866..14871916,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=56172 | |EntrezGene=56172 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15492 | |HGNC=15492 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HCJ1 | |UniProt=Q9HCJ1 | ||
|association_with_transcript=0bp_to_ENST00000284268,NM_054027,uc003jfm.3_5end | |||
|cluster_id=chr5:14871866..14871916,- | |||
|description=CAGE_peak_1_at_ANKH_5end | |||
|id=chr5:14871866..14871916,- | |||
|ontology_enrichment_celltype=CL:0000084!6.18e-11!25;CL:0000827!6.18e-11!25;CL:0000791!8.34e-11!18;CL:0000789!8.34e-11!18;CL:0002420!8.34e-11!18;CL:0002419!8.34e-11!18;CL:0000790!8.34e-11!18;CL:0002087!1.91e-10!119;CL:0002031!4.17e-10!124;CL:0000838!2.55e-09!52;CL:0000542!4.03e-09!53;CL:0000051!4.03e-09!53;CL:0000625!1.73e-07!11;CL:0000738!2.04e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000084;5.81e-11;25!CL:0000791;7.18e-11;18!CL:0000789;7.18e-11;18!CL:0002419;7.18e-11;18!CL:0000625;1.62e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,6.16e-11,25;CL:0000827,6.16e-11,25;CL:0000791,8.32e-11,18;CL:0000789,8.32e-11,18;CL:0002420,8.32e-11,18;CL:0002419,8.32e-11,18;CL:0000790,8.32e-11,18;CL:0002087,8.35e-10,115;CL:0002031,1.88e-09,120;CL:0000838,2.72e-09,52;CL:0000542,4.30e-09,53;CL:0000051,4.30e-09,53;CL:0000625,1.73e-07,11;CL:0000738,7.55e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000790;7.18e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.11e-21!115;UBERON:0001049!6.78e-10!57;UBERON:0005068!6.78e-10!57;UBERON:0006241!6.78e-10!57;UBERON:0007135!6.78e-10!57;UBERON:0002616!3.05e-09!59;UBERON:0000955!6.25e-08!69;UBERON:0006238!6.25e-08!69;UBERON:0003080!9.24e-08!42;UBERON:0002780!9.83e-08!41;UBERON:0001890!9.83e-08!41;UBERON:0006240!9.83e-08!41;UBERON:0003075!3.92e-07!86;UBERON:0007284!3.92e-07!86;UBERON:0001557!5.89e-07!19;UBERON:0001737!7.40e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;7.26e-07;9!UBERON:0001557;7.26e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.01e-20,114;UBERON:0001049,7.27e-10,56;UBERON:0005068,7.27e-10,56;UBERON:0006241,7.27e-10,56;UBERON:0007135,7.27e-10,56;UBERON:0000073,5.84e-09,53;UBERON:0002616,5.84e-09,53;UBERON:0000955,7.00e-08,68;UBERON:0006238,7.00e-08,68;UBERON:0003075,7.06e-08,82;UBERON:0007284,7.06e-08,82;UBERON:0002780,9.81e-08,41;UBERON:0001890,9.81e-08,41;UBERON:0003080,9.81e-08,41;UBERON:0006240,9.81e-08,41;UBERON:0001557,5.88e-07,19;UBERON:0001737,7.39e-07,9 | |||
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| ||
|short_description=p1@ANKH | |||
}} | }} |
Latest revision as of 01:19, 16 September 2015
Short description: | p1@ANKH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ANKH_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000284268, NM_054027, uc003jfm.3_5end |
EntrezGene: | ANKH |
HGNC: | 15492 |
UniProt: | Q9HCJ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 6.16e-11 | 25 |
pro-T cell | 6.16e-11 | 25 |
mature alpha-beta T cell | 8.32e-11 | 18 |
alpha-beta T cell | 8.32e-11 | 18 |
immature T cell | 8.32e-11 | 18 |
mature T cell | 8.32e-11 | 18 |
immature alpha-beta T cell | 8.32e-11 | 18 |
nongranular leukocyte | 8.35e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 1.88e-09 | 120 |
lymphoid lineage restricted progenitor cell | 2.72e-09 | 52 |
lymphocyte | 4.30e-09 | 53 |
common lymphoid progenitor | 4.30e-09 | 53 |
CD8-positive, alpha-beta T cell | 1.73e-07 | 11 |
leukocyte | 7.55e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.01e-20 | 114 |
neural tube | 7.27e-10 | 56 |
neural rod | 7.27e-10 | 56 |
future spinal cord | 7.27e-10 | 56 |
neural keel | 7.27e-10 | 56 |
regional part of nervous system | 5.84e-09 | 53 |
regional part of brain | 5.84e-09 | 53 |
brain | 7.00e-08 | 68 |
future brain | 7.00e-08 | 68 |
neural plate | 7.06e-08 | 82 |
presumptive neural plate | 7.06e-08 | 82 |
regional part of forebrain | 9.81e-08 | 41 |
forebrain | 9.81e-08 | 41 |
anterior neural tube | 9.81e-08 | 41 |
future forebrain | 9.81e-08 | 41 |
upper respiratory tract | 5.88e-07 | 19 |
larynx | 7.39e-07 | 9 |