FFCP PHASE1:Hg19::chr17:48585794..48585846,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84073 | |EntrezGene=84073 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19677 | |HGNC=19677 | ||
|TSSclassifier=strong | |||
|UniProt=C9JZX1 | |UniProt=C9JZX1 | ||
|association_with_transcript=-4bp_to_ENST00000419930_5end | |association_with_transcript=-4bp_to_ENST00000419930_5end | ||
|cluster_id=chr17:48585794..48585846,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_1_at_MYCBPAP_5end | |description=CAGE_peak_1_at_MYCBPAP_5end | ||
|id=chr17:48585794..48585846,+ | |id=chr17:48585794..48585846,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:1240,3.34e-07,39;DOID:2531,4.91e-07,51;DOID:0060083,4.91e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0001049!7.76e-17!57;UBERON:0005068!7.76e-17!57;UBERON:0006241!7.76e-17!57;UBERON:0007135!7.76e-17!57;UBERON:0002616!3.71e-14!59;UBERON:0007023!5.77e-13!115;UBERON:0002780!6.83e-13!41;UBERON:0001890!6.83e-13!41;UBERON:0006240!6.83e-13!41;UBERON:0001017!1.11e-12!82;UBERON:0003080!3.57e-12!42;UBERON:0005743!4.39e-12!86;UBERON:0002346!6.97e-12!90;UBERON:0000955!1.32e-11!69;UBERON:0006238!1.32e-11!69;UBERON:0000073!1.42e-11!94;UBERON:0001016!1.42e-11!94;UBERON:0001893!3.04e-11!34;UBERON:0002020!3.42e-11!34;UBERON:0003528!3.42e-11!34;UBERON:0003075!1.02e-10!86;UBERON:0007284!1.02e-10!86;UBERON:0002791!1.09e-10!33;UBERON:0001869!1.23e-10!32;UBERON:0002619!8.00e-08!22;UBERON:0000956!2.04e-07!25;UBERON:0000203!2.04e-07!25;UBERON:0001950!2.88e-07!20;UBERON:0003056!4.57e-07!61 | |ontology_enrichment_uberon=UBERON:0001049!7.76e-17!57;UBERON:0005068!7.76e-17!57;UBERON:0006241!7.76e-17!57;UBERON:0007135!7.76e-17!57;UBERON:0002616!3.71e-14!59;UBERON:0007023!5.77e-13!115;UBERON:0002780!6.83e-13!41;UBERON:0001890!6.83e-13!41;UBERON:0006240!6.83e-13!41;UBERON:0001017!1.11e-12!82;UBERON:0003080!3.57e-12!42;UBERON:0005743!4.39e-12!86;UBERON:0002346!6.97e-12!90;UBERON:0000955!1.32e-11!69;UBERON:0006238!1.32e-11!69;UBERON:0000073!1.42e-11!94;UBERON:0001016!1.42e-11!94;UBERON:0001893!3.04e-11!34;UBERON:0002020!3.42e-11!34;UBERON:0003528!3.42e-11!34;UBERON:0003075!1.02e-10!86;UBERON:0007284!1.02e-10!86;UBERON:0002791!1.09e-10!33;UBERON:0001869!1.23e-10!32;UBERON:0002619!8.00e-08!22;UBERON:0000956!2.04e-07!25;UBERON:0000203!2.04e-07!25;UBERON:0001950!2.88e-07!20;UBERON:0003056!4.57e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.12e-12;34!UBERON:0001869;9.92e-12;32!UBERON:0002619;1.71e-11;22!UBERON:0001950;4.71e-11;20!UBERON:0000073;5.95e-11;53!UBERON:0002616;5.95e-11;53!UBERON:0002791;1.55e-10;32!UBERON:0003528;2.14e-10;34!UBERON:0002020;2.14e-10;34!UBERON:0002780;6.45e-10;41!UBERON:0001890;6.45e-10;41!UBERON:0000956;9.13e-10;25!UBERON:0000203;9.13e-10;25!UBERON:0001872;1.02e-08;5!UBERON:0000955;1.44e-07;68!UBERON:0001017;4.29e-07;75!UBERON:0001016;8.42e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.72e-19,56;UBERON:0005068,1.72e-19,56;UBERON:0006241,1.72e-19,56;UBERON:0007135,1.72e-19,56;UBERON:0000073,2.15e-19,53;UBERON:0002616,2.15e-19,53;UBERON:0001016,2.49e-18,89;UBERON:0001017,2.98e-17,81;UBERON:0000955,1.75e-15,68;UBERON:0006238,1.75e-15,68;UBERON:0002780,3.47e-14,41;UBERON:0001890,3.47e-14,41;UBERON:0003080,3.47e-14,41;UBERON:0006240,3.47e-14,41;UBERON:0001893,5.20e-13,34;UBERON:0001869,1.18e-12,32;UBERON:0002346,8.07e-12,86;UBERON:0003528,1.28e-11,34;UBERON:0002020,1.28e-11,34;UBERON:0002619,2.09e-11,22;UBERON:0002791,4.76e-11,32;UBERON:0001950,7.35e-11,20;UBERON:0003075,9.08e-11,82;UBERON:0007284,9.08e-11,82;UBERON:0007023,5.15e-10,114;UBERON:0010371,6.19e-10,104;UBERON:0000956,1.09e-09,25;UBERON:0000203,1.09e-09,25;UBERON:0004121,5.71e-09,171;UBERON:0000924,5.71e-09,171;UBERON:0006601,5.71e-09,171;UBERON:0001872,8.59e-09,5;UBERON:0003056,9.11e-08,61 | |||
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| ||
|short_description=p1@MYCBPAP | |short_description=p1@MYCBPAP | ||
}} | }} |
Latest revision as of 02:55, 16 September 2015
Short description: | p1@MYCBPAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MYCBPAP_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -4bp_to_ENST00000419930_5end |
EntrezGene: | MYCBPAP |
HGNC: | 19677 |
UniProt: | C9JZX1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 1.72e-19 | 56 |
neural rod | 1.72e-19 | 56 |
future spinal cord | 1.72e-19 | 56 |
neural keel | 1.72e-19 | 56 |
regional part of nervous system | 2.15e-19 | 53 |
regional part of brain | 2.15e-19 | 53 |
nervous system | 2.49e-18 | 89 |
central nervous system | 2.98e-17 | 81 |
brain | 1.75e-15 | 68 |
future brain | 1.75e-15 | 68 |
regional part of forebrain | 3.47e-14 | 41 |
forebrain | 3.47e-14 | 41 |
anterior neural tube | 3.47e-14 | 41 |
future forebrain | 3.47e-14 | 41 |
telencephalon | 5.20e-13 | 34 |
cerebral hemisphere | 1.18e-12 | 32 |
neurectoderm | 8.07e-12 | 86 |
brain grey matter | 1.28e-11 | 34 |
gray matter | 1.28e-11 | 34 |
regional part of cerebral cortex | 2.09e-11 | 22 |
regional part of telencephalon | 4.76e-11 | 32 |
neocortex | 7.35e-11 | 20 |
neural plate | 9.08e-11 | 82 |
presumptive neural plate | 9.08e-11 | 82 |
adult organism | 5.15e-10 | 114 |
ecto-epithelium | 6.19e-10 | 104 |
cerebral cortex | 1.09e-09 | 25 |
pallium | 1.09e-09 | 25 |
ectoderm-derived structure | 5.71e-09 | 171 |
ectoderm | 5.71e-09 | 171 |
presumptive ectoderm | 5.71e-09 | 171 |
parietal lobe | 8.59e-09 | 5 |
pre-chordal neural plate | 9.11e-08 | 61 |
Ontology term | p-value | n |
---|---|---|
leukemia | 3.34e-07 | 39 |
hematologic cancer | 4.91e-07 | 51 |
immune system cancer | 4.91e-07 | 51 |