FFCP PHASE1:Hg19::chr16:29817231..29817290,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:29817231..29817290,+
|short_description=p10@MAZ
|description=CAGE_peak_10_at_MAZ_5end
|association_with_transcript=-135bp_to_uc002dtv.1,uc010vdx.1_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4150 | |EntrezGene=4150 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6914 | |HGNC=6914 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-135bp_to_uc002dtv.1,uc010vdx.1_5end | |||
|cluster_id=chr16:29817231..29817290,+ | |||
|description=CAGE_peak_10_at_MAZ_5end | |||
|id=chr16:29817231..29817290,+ | |||
|ontology_enrichment_celltype=CL:0000988!3.25e-08!182;CL:0000037!2.30e-07!172;CL:0000566!2.30e-07!172 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.51e-08,177;CL:0000037,2.22e-07,168 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!5.49e-08!51;DOID:0060083!5.49e-08!51;DOID:1240!2.20e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.92e-08,51;DOID:0060083,2.92e-08,51;DOID:1240,1.27e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.10e-19!94;UBERON:0001016!1.10e-19!94;UBERON:0001049!1.20e-19!57;UBERON:0005068!1.20e-19!57;UBERON:0006241!1.20e-19!57;UBERON:0007135!1.20e-19!57;UBERON:0001017!7.10e-19!82;UBERON:0005743!3.43e-18!86;UBERON:0002020!8.80e-17!34;UBERON:0003528!8.80e-17!34;UBERON:0001893!1.20e-16!34;UBERON:0001869!1.30e-16!32;UBERON:0002616!1.97e-16!59;UBERON:0002791!3.92e-16!33;UBERON:0007023!5.37e-16!115;UBERON:0002346!7.51e-16!90;UBERON:0003080!1.46e-15!42;UBERON:0002780!3.00e-15!41;UBERON:0001890!3.00e-15!41;UBERON:0006240!3.00e-15!41;UBERON:0000955!6.75e-15!69;UBERON:0006238!6.75e-15!69;UBERON:0003075!1.48e-14!86;UBERON:0007284!1.48e-14!86;UBERON:0002619!1.57e-13!22;UBERON:0000956!2.35e-13!25;UBERON:0000203!2.35e-13!25;UBERON:0001950!1.46e-12!20;UBERON:0003056!3.94e-12!61;UBERON:0000924!6.64e-07!173;UBERON:0006601!6.64e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.67e-15;32!UBERON:0003528;3.72e-15;34!UBERON:0002020;3.72e-15;34!UBERON:0002791;3.75e-15;32!UBERON:0001893;7.30e-15;34!UBERON:0002619;5.02e-14;22!UBERON:0000956;8.31e-14;25!UBERON:0000203;8.31e-14;25!UBERON:0001950;5.35e-13;20!UBERON:0002780;9.03e-12;41!UBERON:0001890;9.03e-12;41!UBERON:0000073;4.11e-11;53!UBERON:0002616;4.11e-11;53!UBERON:0000955;7.31e-08;68!UBERON:0001017;9.80e-08;75!UBERON:0001016;1.79e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.96e-20,89;UBERON:0001049,1.69e-19,56;UBERON:0005068,1.69e-19,56;UBERON:0006241,1.69e-19,56;UBERON:0007135,1.69e-19,56;UBERON:0000073,7.97e-19,53;UBERON:0002616,7.97e-19,53;UBERON:0001017,9.20e-19,81;UBERON:0003528,5.00e-17,34;UBERON:0002020,5.00e-17,34;UBERON:0001893,6.87e-17,34;UBERON:0001869,7.45e-17,32;UBERON:0002346,1.42e-16,86;UBERON:0002791,1.83e-16,32;UBERON:0002780,2.35e-15,41;UBERON:0001890,2.35e-15,41;UBERON:0003080,2.35e-15,41;UBERON:0006240,2.35e-15,41;UBERON:0007023,2.49e-15,114;UBERON:0003075,3.09e-15,82;UBERON:0007284,3.09e-15,82;UBERON:0000955,9.77e-15,68;UBERON:0006238,9.77e-15,68;UBERON:0002619,1.00e-13,22;UBERON:0000956,1.52e-13,25;UBERON:0000203,1.52e-13,25;UBERON:0001950,9.70e-13,20;UBERON:0003056,5.52e-12,61;UBERON:0010371,2.15e-09,104;UBERON:0004121,4.18e-07,171;UBERON:0000924,4.18e-07,171;UBERON:0006601,4.18e-07,171;UBERON:0010314,4.88e-07,132 | |||
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| ||
|short_description=p10@MAZ | |||
}} | }} |
Latest revision as of 03:38, 16 September 2015
Short description: | p10@MAZ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_MAZ_5end |
Coexpression cluster: | NA |
Association with transcript: | -135bp_to_uc002dtv.1, uc010vdx.1_5end |
EntrezGene: | MAZ |
HGNC: | 6914 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 3.51e-08 | 177 |
hematopoietic stem cell | 2.22e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.96e-20 | 89 |
neural tube | 1.69e-19 | 56 |
neural rod | 1.69e-19 | 56 |
future spinal cord | 1.69e-19 | 56 |
neural keel | 1.69e-19 | 56 |
regional part of nervous system | 7.97e-19 | 53 |
regional part of brain | 7.97e-19 | 53 |
central nervous system | 9.20e-19 | 81 |
brain grey matter | 5.00e-17 | 34 |
gray matter | 5.00e-17 | 34 |
telencephalon | 6.87e-17 | 34 |
cerebral hemisphere | 7.45e-17 | 32 |
neurectoderm | 1.42e-16 | 86 |
regional part of telencephalon | 1.83e-16 | 32 |
regional part of forebrain | 2.35e-15 | 41 |
forebrain | 2.35e-15 | 41 |
anterior neural tube | 2.35e-15 | 41 |
future forebrain | 2.35e-15 | 41 |
adult organism | 2.49e-15 | 114 |
neural plate | 3.09e-15 | 82 |
presumptive neural plate | 3.09e-15 | 82 |
brain | 9.77e-15 | 68 |
future brain | 9.77e-15 | 68 |
regional part of cerebral cortex | 1.00e-13 | 22 |
cerebral cortex | 1.52e-13 | 25 |
pallium | 1.52e-13 | 25 |
neocortex | 9.70e-13 | 20 |
pre-chordal neural plate | 5.52e-12 | 61 |
ecto-epithelium | 2.15e-09 | 104 |
ectoderm-derived structure | 4.18e-07 | 171 |
ectoderm | 4.18e-07 | 171 |
presumptive ectoderm | 4.18e-07 | 171 |
structure with developmental contribution from neural crest | 4.88e-07 | 132 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.92e-08 | 51 |
immune system cancer | 2.92e-08 | 51 |
leukemia | 1.27e-07 | 39 |