FFCP PHASE1:Hg19::chr1:228871683..228871704,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:228871683..228871704,+ to FFCP PHASE1:Hg19::chr1:228871683..228871704,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=58480 | |EntrezGene=58480 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=17794 | |HGNC=17794 | ||
|TSSclassifier=strong | |||
|UniProt=Q7L0Q8 | |UniProt=Q7L0Q8 | ||
|association_with_transcript=0bp_to_AF251701_5end | |||
|cluster_id=chr1:228871683..228871704,+ | |||
|description=CAGE_peak_4_at_RHOU_5end | |||
|id=chr1:228871683..228871704,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.64e-12!42;CL:0000860!4.40e-11!45;CL:0002009!7.09e-10!65;CL:0002194!1.40e-09!63;CL:0000576!1.40e-09!63;CL:0000040!1.40e-09!63;CL:0000559!1.40e-09!63;CL:0000557!3.18e-08!71;CL:0000839!1.07e-07!70;CL:0000766!1.61e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0002541;1.63e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.32e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.31e-08;1!UBERON:0006242;9.38e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;3.31e-08;1!DOID:4549;3.31e-08;1!DOID:5861;3.31e-08;1!DOID:6496;3.31e-08;1!DOID:1799;9.38e-08;1!DOID:10165;9.38e-08;1!DOID:1798;9.38e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,3.55e-08,1;DOID:4549,3.55e-08,1;DOID:5861,3.55e-08,1;DOID:6496,3.55e-08,1;DOID:1799,6.10e-08,1;DOID:10165,6.10e-08,1;DOID:1798,6.10e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.13e-27!115;UBERON:0001049!5.75e-19!57;UBERON:0005068!5.75e-19!57;UBERON:0006241!5.75e-19!57;UBERON:0007135!5.75e-19!57;UBERON:0002616!3.08e-16!59;UBERON:0005743!6.59e-16!86;UBERON:0001017!1.94e-15!82;UBERON:0002780!3.66e-15!41;UBERON:0001890!3.66e-15!41;UBERON:0006240!3.66e-15!41;UBERON:0000073!6.31e-15!94;UBERON:0001016!6.31e-15!94;UBERON:0000955!7.41e-15!69;UBERON:0006238!7.41e-15!69;UBERON:0003080!1.42e-14!42;UBERON:0003075!3.07e-14!86;UBERON:0007284!3.07e-14!86;UBERON:0001893!5.05e-14!34;UBERON:0002020!1.58e-13!34;UBERON:0003528!1.58e-13!34;UBERON:0002791!3.68e-13!33;UBERON:0002346!5.75e-13!90;UBERON:0001869!3.51e-12!32;UBERON:0003056!3.73e-11!61;UBERON:0002308!2.69e-09!9;UBERON:0000125!2.69e-09!9;UBERON:0002420!2.86e-09!9;UBERON:0007245!2.86e-09!9;UBERON:0010009!2.86e-09!9;UBERON:0010011!2.86e-09!9;UBERON:0000454!2.86e-09!9;UBERON:0002619!1.08e-08!22;UBERON:0000033!3.60e-08!123;UBERON:0000153!4.19e-08!129;UBERON:0007811!4.19e-08!129;UBERON:0009663!6.67e-08!7;UBERON:0000062!6.68e-08!511;UBERON:0001950!2.41e-07!20;UBERON:0000956!3.84e-07!25;UBERON:0000203!3.84e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0005162;1.03e-14;2!UBERON:0000122;1.03e-14;2!UBERON:0003124;1.63e-09;3!UBERON:0000920;1.63e-09;3!UBERON:0002336;3.31e-08;1!UBERON:0000941;3.31e-08;1!UBERON:0001785;3.31e-08;1!UBERON:0002464;3.31e-08;1!UBERON:0004904;3.31e-08;1!UBERON:0011215;3.31e-08;1!UBERON:0001018;3.31e-08;1!UBERON:0001021;3.31e-08;1!UBERON:0002473;3.31e-08;1!UBERON:0005340;3.31e-08;1!UBERON:0003544;3.31e-08;1!UBERON:0005970;3.31e-08;1!UBERON:0002316;3.31e-08;1!UBERON:0001020;3.31e-08;1!UBERON:0002437;3.31e-08;1!UBERON:0002038;9.38e-08;1!UBERON:0000996;9.38e-08;1!UBERON:0009661;9.38e-08;1!UBERON:0002950;9.38e-08;1!UBERON:0001891;9.38e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005162,1.03e-14,2;UBERON:0000122,1.03e-14,2;UBERON:0000920,1.32e-09,3;UBERON:0000941,2.70e-08,1;UBERON:0001785,2.70e-08,1;UBERON:0002464,2.70e-08,1;UBERON:0004904,2.70e-08,1;UBERON:0001021,2.70e-08,1;UBERON:0003902,2.70e-08,1;UBERON:0005425,2.70e-08,1;UBERON:0002336,4.07e-08,1;UBERON:0011215,4.07e-08,1;UBERON:0001018,4.07e-08,1;UBERON:0002473,4.07e-08,1;UBERON:0005340,4.07e-08,1;UBERON:0003544,4.07e-08,1;UBERON:0005970,4.07e-08,1;UBERON:0002316,4.07e-08,1;UBERON:0001020,4.07e-08,1;UBERON:0002437,4.07e-08,1;UBERON:0001049,9.26e-08,56;UBERON:0005068,9.26e-08,56;UBERON:0006241,9.26e-08,56;UBERON:0007135,9.26e-08,56;UBERON:0000996,9.72e-08,1;UBERON:0002038,1.04e-07,1;UBERON:0009661,1.04e-07,1;UBERON:0002950,1.04e-07,1;UBERON:0001891,1.04e-07,1;UBERON:0009616,1.04e-07,1;UBERON:0010286,1.04e-07,1;UBERON:0002780,8.16e-07,41;UBERON:0001890,8.16e-07,41;UBERON:0003080,8.16e-07,41;UBERON:0006240,8.16e-07,41 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0,0,0.868043482863407,0.223915474239924,0.32389366601898,0.515151135268373,0.581592955118259,0.377875943688809,0.242584061187816,0.464858073811369,1.23350366406548,0.619412741790207,0,0.512321413058201,0.236482229888585,0.344745680736619,0,1.35426486594342,0.188242339542605,0.272906150057846,0,0.306083892370903,0.641858054152187,0,0.659702600373432,0.598390972864896,0.426224750532694,0,2.26954089876456,0.622822248995575,0.75374599577023,0,0.217188844705117,1.81619850790011,0,1.26584954976354,1.05627643155971,0,0,0.112328631146495,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.950452044448374,0.150575119077773,0.127986611154418,0,0,0,0,0,0,0,1.34140171940727,0.255725123687061,0,0,0.144846518960824,0,0,0.283604451492204,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0.243947412259191,0.265059536642971,0.464775771478074,0.414644220061482,0.504641701751257,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0.982827216677626,0,0,0.245976877086227,0.171567810298526,0,0,0,0,0,0,0,0.34779121492523,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,2.71295439353627,0,2.29937879718731,0,1.00451418286425,0,0,0,0,0,0,0,0,0.394061520403854,0.215627574859517,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0.656029291399411,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.711418433484141,0.478278818186467,0,0,0,0.324621940274555,0,0,0.313359791546046,0,0.169291777801603,0,0.403599414382095,0,0.343505344755765,0.307240764308458,0,0,0.976940477010201,0,0,0,0,0,0,0.146508179271894,0,0,0,0.47748896947538,0,0,0.994147647766298,0.140669416410513,0,0,0,0.19924798825107,0,0,0.613612095012929,0,0,0,0,0,0.295930216910801,0,0,0.969332746095218,0.649376687132959,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.361789315876224,0,0.110579259931225,0.591095237907095,0.219385397153973,0,0.278847488557207,0.0769502585037971,0,1.38338342632836,1.52587995496613,0.325942115766024,1.27600463892768,0.641183153813036,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,2.02203398942031,0,0.234264445725339,0,0,0,0.394584402849391,0,1.53036380815245,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,2.29465929397901,0.677942222341597,0,0,0.379864775735272,0,0,1.06726497369676,0.39961921916426,0,0,0,0,0,0.235694034616795,0,0,0,0,1.20084057741958,0.547621515567972,0,0,0,0.279282401272254,0,0,0,0.429226048136571,0,0,0,0,0.157566364614447,0.164831716762333,0.0674035438541849,0,0,0.795229689809303,0.272406812223151,0,0,0,0,0.77380195455795,0.242998226632099,0,0.0788057072991982,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0.146552233678082,0,0.517131825446202,0.26446520348538,0,0,0.213574825135389,0.157204305099666,0,0,0,0,0,0,0,0.306345576763462,0.327872630709804,0,0,0.854183854313742,0,0.573409195690071,0.443716206147409,0.869349641179368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0.414706207840855,0,0,0.450772826991655,1.90402606084398,0,0,0.537052785212442,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0.617602894321944,0.219284049578707,0.176689145945881,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0.76736622782191,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0.706521476061055,1.41696576325585,0,2.46139637088906,0.756215088665154,0.484100767249525,0.807378228159255,2.85538840518309,0,0,0,0,0,0,0,0.225630985047772,0,0,1.57144016688853,0,0,0.945526184657525,0,0,0.253663240775627,0,0,0,0,0,0,0,0.606965604236632,0,0.0887023701626388,0,0,1.01954599465248,0.920818829879887,0,0,0.235479278551542,0.314231179832004,1.96190514319652,0,0,0,0.357382720883282,0,0.116241425368125,0,0,0,0.3414369541879,0.691259661814092,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0.118920090777569,0,0.219881033490858,0.150962843566674,0.154348316215889,0.437119121007915,0,0,0,1.17785080268967,0,0.8453114551668,0,0.0939839179798536,0.128915775947154,0,0,0,0,0,0.458729283404541,1.29005624836306,0.631086248772738,0.679914901909147,0,0.5290268405154,0,0,0,0,0.109265571963696,0,0.101988829741982,0,0.459474497674225,0.250707539292375,0.530450887527676,0.267964130156178,1.65833887891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| ||
|short_description=p4@RHOU | |||
}} | }} |
Latest revision as of 04:30, 16 September 2015
Short description: | p4@RHOU |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RHOU_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_AF251701_5end |
EntrezGene: | RHOU |
HGNC: | 17794 |
UniProt: | Q7L0Q8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.32e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
multi cell component structure | 1.03e-14 | 2 |
neuron projection bundle | 1.03e-14 | 2 |
egg chorion | 1.32e-09 | 3 |
cranial nerve II | 2.70e-08 | 1 |
cranial nerve | 2.70e-08 | 1 |
nerve trunk | 2.70e-08 | 1 |
nerve connecting eye with brain | 2.70e-08 | 1 |
nerve | 2.70e-08 | 1 |
retinal neural layer | 2.70e-08 | 1 |
presumptive neural retina | 2.70e-08 | 1 |
corpus callosum | 4.07e-08 | 1 |
central nervous system cell part cluster | 4.07e-08 | 1 |
axon tract | 4.07e-08 | 1 |
intercerebral commissure | 4.07e-08 | 1 |
dorsal telencephalic commissure | 4.07e-08 | 1 |
brain white matter | 4.07e-08 | 1 |
brain commissure | 4.07e-08 | 1 |
white matter | 4.07e-08 | 1 |
nervous system commissure | 4.07e-08 | 1 |
cerebral hemisphere white matter | 4.07e-08 | 1 |
neural tube | 9.26e-08 | 56 |
neural rod | 9.26e-08 | 56 |
future spinal cord | 9.26e-08 | 56 |
neural keel | 9.26e-08 | 56 |
vagina | 9.72e-08 | 1 |
substantia nigra | 1.04e-07 | 1 |
midbrain nucleus | 1.04e-07 | 1 |
regional part of midbrain | 1.04e-07 | 1 |
midbrain | 1.04e-07 | 1 |
presumptive midbrain | 1.04e-07 | 1 |
midbrain neural tube | 1.04e-07 | 1 |
regional part of forebrain | 8.16e-07 | 41 |
forebrain | 8.16e-07 | 41 |
anterior neural tube | 8.16e-07 | 41 |
future forebrain | 8.16e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 3.55e-08 | 1 |
extraosseous chondrosarcoma | 3.55e-08 | 1 |
myxoid chondrosarcoma | 3.55e-08 | 1 |
extraskeletal myxoid chondrosarcoma | 3.55e-08 | 1 |
islet cell tumor | 6.10e-08 | 1 |
endocrine pancreas cancer | 6.10e-08 | 1 |
pancreatic endocrine carcinoma | 6.10e-08 | 1 |