FFCP PHASE1:Hg19::chr19:14606900..14606955,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10755 | |EntrezGene=10755 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1226 | |HGNC=1226 | ||
|TSSclassifier=strong | |||
|UniProt=O14908,A8K4I3 | |UniProt=O14908,A8K4I3 | ||
|association_with_transcript=0bp_to_ENST00000345425,ENST00000351277,ENST00000393028,ENST00000393029,ENST00000393033,NM_005716,NM_202467,NM_202468,NM_202469,NM_202470,NM_202494,uc002myt.2,uc002myu.2,uc002myv.2,uc002myw.2,uc002myx.2,uc002myy.2_5end | |association_with_transcript=0bp_to_ENST00000345425,ENST00000351277,ENST00000393028,ENST00000393029,ENST00000393033,NM_005716,NM_202467,NM_202468,NM_202469,NM_202470,NM_202494,uc002myt.2,uc002myu.2,uc002myv.2,uc002myw.2,uc002myx.2,uc002myy.2_5end | ||
|cluster_id=chr19:14606900..14606955,- | |||
|description=CAGE_peak_1_at_GIPC1_5end | |description=CAGE_peak_1_at_GIPC1_5end | ||
|id=chr19:14606900..14606955,- | |id=chr19:14606900..14606955,- | ||
|ontology_enrichment_celltype=CL:0000220!1.88e-32!246;CL:0002321!3.12e-32!248;CL:0000066!3.83e-25!254;CL:0000222!1.46e-22!119;CL:0000055!2.33e-16!180;CL:0000183!1.01e-13!59;CL:0000192!3.46e-13!42;CL:0000514!3.46e-13!42;CL:0000680!6.71e-12!57;CL:0000056!6.71e-12!57;CL:0000355!6.71e-12!57;CL:0000187!1.15e-11!54;CL:0000359!1.46e-11!32;CL:0000393!1.38e-09!60;CL:0000211!1.38e-09!60;CL:0000213!1.52e-09!57;CL:0000215!1.52e-09!57;CL:0000076!3.30e-09!62;CL:0002078!3.52e-09!44;CL:1000449!3.83e-09!16;CL:0000115!5.53e-08!35;CL:1000497!7.75e-08!18;CL:0002518!7.75e-08!18;CL:0002681!9.76e-08!13;CL:0002584!9.76e-08!13;CL:0000548!1.54e-07!679;CL:0000004!1.54e-07!679;CL:0000255!1.54e-07!679;CL:1000507!2.69e-07!12;CL:1000494!2.69e-07!12;CL:0002076!4.19e-07!43;CL:0000012!7.05e-07!682;CL:0002139!8.97e-07!24 | |ontology_enrichment_celltype=CL:0000220!1.88e-32!246;CL:0002321!3.12e-32!248;CL:0000066!3.83e-25!254;CL:0000222!1.46e-22!119;CL:0000055!2.33e-16!180;CL:0000183!1.01e-13!59;CL:0000192!3.46e-13!42;CL:0000514!3.46e-13!42;CL:0000680!6.71e-12!57;CL:0000056!6.71e-12!57;CL:0000355!6.71e-12!57;CL:0000187!1.15e-11!54;CL:0000359!1.46e-11!32;CL:0000393!1.38e-09!60;CL:0000211!1.38e-09!60;CL:0000213!1.52e-09!57;CL:0000215!1.52e-09!57;CL:0000076!3.30e-09!62;CL:0002078!3.52e-09!44;CL:1000449!3.83e-09!16;CL:0000115!5.53e-08!35;CL:1000497!7.75e-08!18;CL:0002518!7.75e-08!18;CL:0002681!9.76e-08!13;CL:0002584!9.76e-08!13;CL:0000548!1.54e-07!679;CL:0000004!1.54e-07!679;CL:0000255!1.54e-07!679;CL:1000507!2.69e-07!12;CL:1000494!2.69e-07!12;CL:0002076!4.19e-07!43;CL:0000012!7.05e-07!682;CL:0002139!8.97e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000359;6.73e-11;32!CL:0000192;6.91e-10;43!CL:1000449;6.20e-09;15!CL:1000497;1.33e-07;17!CL:0002518;1.33e-07;17!CL:0000349;1.40e-07;19!CL:0002681;1.62e-07;12!CL:0002584;1.62e-07;12!CL:0000115;5.90e-07;36!CL:1000507;6.35e-07;10!CL:1000494;6.35e-07;10!CL:0000134;7.29e-07;55!CL:0000187;8.12e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,7.19e-33,250;CL:0000066,7.55e-25,253;CL:0000222,4.01e-23,121;CL:0000192,1.85e-13,43;CL:0000514,1.85e-13,43;CL:0000680,3.63e-12,58;CL:0000056,3.63e-12,58;CL:0000355,3.63e-12,58;CL:0000187,6.23e-12,55;CL:0000359,1.46e-11,32;CL:0000393,7.71e-10,61;CL:0000211,7.71e-10,61;CL:0000213,9.01e-10,58;CL:0000215,9.01e-10,58;CL:0002078,2.06e-09,45;CL:0000076,2.27e-09,63;CL:1000449,6.43e-09,15;CL:0000115,3.25e-08,36;CL:0000349,1.36e-07,19;CL:1000497,1.39e-07,17;CL:0002518,1.39e-07,17;CL:0002681,1.63e-07,12;CL:0002584,1.63e-07,12;CL:0002076,6.01e-07,42;CL:1000507,6.54e-07,10;CL:1000494,6.54e-07,10;CL:0002139,8.96e-07,24;CL:0002077,9.31e-07,34 | |||
|ontology_enrichment_development_v019=CL:0000514;6.91e-10;43!CL:0000222;3.68e-07;121!CL:0000355;5.23e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!3.28e-25!312;UBERON:0000483!5.22e-25!309;UBERON:0000475!4.40e-23!365;UBERON:0003914!7.83e-20!118;UBERON:0005256!1.19e-18!143;UBERON:0000481!1.18e-17!347;UBERON:0002100!1.48e-17!216;UBERON:0002049!3.17e-17!79;UBERON:0007798!3.17e-17!79;UBERON:0004111!7.88e-17!241;UBERON:0000477!4.50e-16!286;UBERON:0004872!2.67e-15!84;UBERON:0000490!1.12e-14!138;UBERON:0000055!1.65e-14!69;UBERON:0003104!1.89e-14!238;UBERON:0009142!1.89e-14!238;UBERON:0000486!5.71e-14!82;UBERON:0001981!7.71e-14!60;UBERON:0007500!7.71e-14!60;UBERON:0004537!7.71e-14!60;UBERON:0006965!7.71e-14!60;UBERON:0000025!1.37e-13!194;UBERON:0000468!4.80e-13!659;UBERON:0001637!1.88e-12!42;UBERON:0003509!1.88e-12!42;UBERON:0004572!1.88e-12!42;UBERON:0000914!2.75e-12!83;UBERON:0002329!2.75e-12!83;UBERON:0003077!2.75e-12!83;UBERON:0003059!2.75e-12!83;UBERON:0007282!2.75e-12!83;UBERON:0009618!2.75e-12!83;UBERON:0007285!2.75e-12!83;UBERON:0000064!4.71e-12!219;UBERON:0000467!5.64e-12!625;UBERON:0000480!1.13e-11!626;UBERON:0004290!2.48e-11!70;UBERON:0001134!3.22e-10!61;UBERON:0002036!3.22e-10!61;UBERON:0003082!3.22e-10!61;UBERON:0004535!4.05e-10!110;UBERON:0001009!8.19e-10!113;UBERON:0002385!1.54e-09!63;UBERON:0001015!1.54e-09!63;UBERON:0000383!1.54e-09!63;UBERON:0004573!2.90e-09!33;UBERON:0004571!2.90e-09!33;UBERON:0006554!3.23e-09!44;UBERON:0004211!3.83e-09!16;UBERON:0001285!3.83e-09!16;UBERON:0007684!3.83e-09!16;UBERON:0003220!3.83e-09!16;UBERON:0004208!3.83e-09!16;UBERON:0001008!6.29e-09!45;UBERON:0006555!1.34e-08!17;UBERON:0005103!1.34e-08!17;UBERON:0000083!1.34e-08!17;UBERON:0009201!1.34e-08!17;UBERON:0004819!1.34e-08!17;UBERON:0006553!1.34e-08!17;UBERON:0003074!1.34e-08!17;UBERON:0003060!1.34e-08!17;UBERON:0003103!2.52e-08!69;UBERON:0002050!3.36e-08!605;UBERON:0005423!3.36e-08!605;UBERON:0000923!3.61e-08!604;UBERON:0005291!3.61e-08!604;UBERON:0006598!3.61e-08!604;UBERON:0002532!3.61e-08!604;UBERON:0000922!4.91e-08!612;UBERON:0000080!6.87e-08!18;UBERON:0002120!6.87e-08!18;UBERON:0004875!6.87e-08!18;UBERON:0005721!6.87e-08!18;UBERON:0005754!6.87e-08!18;UBERON:0007297!6.87e-08!18;UBERON:0000353!7.27e-08!17;UBERON:0003064!8.31e-08!37;UBERON:0001225!9.76e-08!13;UBERON:0008987!9.76e-08!13;UBERON:0005631!1.24e-07!14;UBERON:0000158!1.24e-07!14;UBERON:0009569!1.48e-07!113;UBERON:0004876!1.62e-07!20;UBERON:0009773!2.69e-07!12;UBERON:0001231!2.69e-07!12;UBERON:0004810!2.69e-07!12;UBERON:0003102!2.75e-07!95;UBERON:0001851!4.40e-07!16;UBERON:0000058!6.20e-07!26 | |ontology_enrichment_uberon=UBERON:0000119!3.28e-25!312;UBERON:0000483!5.22e-25!309;UBERON:0000475!4.40e-23!365;UBERON:0003914!7.83e-20!118;UBERON:0005256!1.19e-18!143;UBERON:0000481!1.18e-17!347;UBERON:0002100!1.48e-17!216;UBERON:0002049!3.17e-17!79;UBERON:0007798!3.17e-17!79;UBERON:0004111!7.88e-17!241;UBERON:0000477!4.50e-16!286;UBERON:0004872!2.67e-15!84;UBERON:0000490!1.12e-14!138;UBERON:0000055!1.65e-14!69;UBERON:0003104!1.89e-14!238;UBERON:0009142!1.89e-14!238;UBERON:0000486!5.71e-14!82;UBERON:0001981!7.71e-14!60;UBERON:0007500!7.71e-14!60;UBERON:0004537!7.71e-14!60;UBERON:0006965!7.71e-14!60;UBERON:0000025!1.37e-13!194;UBERON:0000468!4.80e-13!659;UBERON:0001637!1.88e-12!42;UBERON:0003509!1.88e-12!42;UBERON:0004572!1.88e-12!42;UBERON:0000914!2.75e-12!83;UBERON:0002329!2.75e-12!83;UBERON:0003077!2.75e-12!83;UBERON:0003059!2.75e-12!83;UBERON:0007282!2.75e-12!83;UBERON:0009618!2.75e-12!83;UBERON:0007285!2.75e-12!83;UBERON:0000064!4.71e-12!219;UBERON:0000467!5.64e-12!625;UBERON:0000480!1.13e-11!626;UBERON:0004290!2.48e-11!70;UBERON:0001134!3.22e-10!61;UBERON:0002036!3.22e-10!61;UBERON:0003082!3.22e-10!61;UBERON:0004535!4.05e-10!110;UBERON:0001009!8.19e-10!113;UBERON:0002385!1.54e-09!63;UBERON:0001015!1.54e-09!63;UBERON:0000383!1.54e-09!63;UBERON:0004573!2.90e-09!33;UBERON:0004571!2.90e-09!33;UBERON:0006554!3.23e-09!44;UBERON:0004211!3.83e-09!16;UBERON:0001285!3.83e-09!16;UBERON:0007684!3.83e-09!16;UBERON:0003220!3.83e-09!16;UBERON:0004208!3.83e-09!16;UBERON:0001008!6.29e-09!45;UBERON:0006555!1.34e-08!17;UBERON:0005103!1.34e-08!17;UBERON:0000083!1.34e-08!17;UBERON:0009201!1.34e-08!17;UBERON:0004819!1.34e-08!17;UBERON:0006553!1.34e-08!17;UBERON:0003074!1.34e-08!17;UBERON:0003060!1.34e-08!17;UBERON:0003103!2.52e-08!69;UBERON:0002050!3.36e-08!605;UBERON:0005423!3.36e-08!605;UBERON:0000923!3.61e-08!604;UBERON:0005291!3.61e-08!604;UBERON:0006598!3.61e-08!604;UBERON:0002532!3.61e-08!604;UBERON:0000922!4.91e-08!612;UBERON:0000080!6.87e-08!18;UBERON:0002120!6.87e-08!18;UBERON:0004875!6.87e-08!18;UBERON:0005721!6.87e-08!18;UBERON:0005754!6.87e-08!18;UBERON:0007297!6.87e-08!18;UBERON:0000353!7.27e-08!17;UBERON:0003064!8.31e-08!37;UBERON:0001225!9.76e-08!13;UBERON:0008987!9.76e-08!13;UBERON:0005631!1.24e-07!14;UBERON:0000158!1.24e-07!14;UBERON:0009569!1.48e-07!113;UBERON:0004876!1.62e-07!20;UBERON:0009773!2.69e-07!12;UBERON:0001231!2.69e-07!12;UBERON:0004810!2.69e-07!12;UBERON:0003102!2.75e-07!95;UBERON:0001851!4.40e-07!16;UBERON:0000058!6.20e-07!26 | ||
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| ||
|short_description=p1@GIPC1 | |short_description=p1@GIPC1 | ||
}} | }} |
Latest revision as of 05:04, 16 September 2015
Short description: | p1@GIPC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GIPC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000345425, ENST00000351277, ENST00000393028, ENST00000393029, ENST00000393033, NM_005716, NM_202467, NM_202468, NM_202469, NM_202470, NM_202494, uc002myt.2, uc002myu.2, uc002myv.2, uc002myw.2, uc002myx.2, uc002myy.2_5end |
EntrezGene: | GIPC1 |
HGNC: | 1226 |
UniProt: | O14908A8K4I3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 7.19e-33 | 250 |
epithelial cell | 7.55e-25 | 253 |
mesodermal cell | 4.01e-23 | 121 |
smooth muscle cell | 1.85e-13 | 43 |
smooth muscle myoblast | 1.85e-13 | 43 |
muscle precursor cell | 3.63e-12 | 58 |
myoblast | 3.63e-12 | 58 |
multi-potent skeletal muscle stem cell | 3.63e-12 | 58 |
muscle cell | 6.23e-12 | 55 |
vascular associated smooth muscle cell | 1.46e-11 | 32 |
electrically responsive cell | 7.71e-10 | 61 |
electrically active cell | 7.71e-10 | 61 |
lining cell | 9.01e-10 | 58 |
barrier cell | 9.01e-10 | 58 |
meso-epithelial cell | 2.06e-09 | 45 |
squamous epithelial cell | 2.27e-09 | 63 |
epithelial cell of nephron | 6.43e-09 | 15 |
endothelial cell | 3.25e-08 | 36 |
extraembryonic cell | 1.36e-07 | 19 |
kidney cell | 1.39e-07 | 17 |
kidney epithelial cell | 1.39e-07 | 17 |
kidney cortical cell | 1.63e-07 | 12 |
renal cortical epithelial cell | 1.63e-07 | 12 |
endo-epithelial cell | 6.01e-07 | 42 |
kidney tubule cell | 6.54e-07 | 10 |
nephron tubule epithelial cell | 6.54e-07 | 10 |
endothelial cell of vascular tree | 8.96e-07 | 24 |
ecto-epithelial cell | 9.31e-07 | 34 |