FFCP PHASE1:Hg19::chr9:135996537..135996544,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5900 | |EntrezGene=5900 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9842 | |HGNC=9842 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000493438_5end | |association_with_transcript=0bp_to_ENST00000493438_5end | ||
|cluster_id=chr9:135996537..135996544,- | |||
|coexpression_cluster_id=C3606 | |coexpression_cluster_id=C3606 | ||
|description=CAGE_peak_9_at_RALGDS_5end | |description=CAGE_peak_9_at_RALGDS_5end | ||
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|ontology_enrichment_celltype=CL:0000766!1.01e-23!76;CL:0000557!9.82e-22!71;CL:0000860!4.11e-21!45;CL:0002009!5.47e-21!65;CL:0002057!6.30e-21!42;CL:0000839!9.67e-20!70;CL:0002194!1.32e-19!63;CL:0000576!1.32e-19!63;CL:0000040!1.32e-19!63;CL:0000559!1.32e-19!63;CL:0000763!2.93e-17!112;CL:0000049!2.93e-17!112;CL:0000738!5.94e-14!140;CL:0000988!4.14e-12!182;CL:0002031!4.59e-12!124;CL:0000037!1.77e-11!172;CL:0000566!1.77e-11!172;CL:0002032!2.36e-11!165;CL:0000837!2.36e-11!165;CL:0002087!7.45e-11!119 | |ontology_enrichment_celltype=CL:0000766!1.01e-23!76;CL:0000557!9.82e-22!71;CL:0000860!4.11e-21!45;CL:0002009!5.47e-21!65;CL:0002057!6.30e-21!42;CL:0000839!9.67e-20!70;CL:0002194!1.32e-19!63;CL:0000576!1.32e-19!63;CL:0000040!1.32e-19!63;CL:0000559!1.32e-19!63;CL:0000763!2.93e-17!112;CL:0000049!2.93e-17!112;CL:0000738!5.94e-14!140;CL:0000988!4.14e-12!182;CL:0002031!4.59e-12!124;CL:0000037!1.77e-11!172;CL:0000566!1.77e-11!172;CL:0002032!2.36e-11!165;CL:0000837!2.36e-11!165;CL:0002087!7.45e-11!119 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.35e-51;33!CL:0002057;5.35e-51;33!CL:0000473;2.05e-40;39!CL:0000234;2.05e-40;39!CL:0000576;9.33e-26;48!CL:0000766;4.37e-23;69!CL:0000094;1.88e-11;8!CL:0000081;7.79e-11;11!CL:0000763;1.26e-09;100!CL:0000767;1.78e-08;3!CL:0000840;1.45e-07;5 | |ontology_enrichment_celltype_v019=CL:0000860;5.35e-51;33!CL:0002057;5.35e-51;33!CL:0000473;2.05e-40;39!CL:0000234;2.05e-40;39!CL:0000576;9.33e-26;48!CL:0000766;4.37e-23;69!CL:0000094;1.88e-11;8!CL:0000081;7.79e-11;11!CL:0000763;1.26e-09;100!CL:0000767;1.78e-08;3!CL:0000840;1.45e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.52e-50,72;CL:0000860,5.53e-48,42;CL:0002057,5.53e-48,42;CL:0000473,1.59e-47,48;CL:0000234,1.59e-47,48;CL:0002009,9.34e-46,61;CL:0000557,2.48e-43,67;CL:0002194,1.00e-41,59;CL:0000576,1.00e-41,59;CL:0000040,1.00e-41,59;CL:0000559,1.00e-41,59;CL:0000839,9.61e-39,66;CL:0000763,1.98e-35,108;CL:0000049,1.98e-35,108;CL:0000738,7.87e-26,136;CL:0000988,6.36e-22,177;CL:0002031,2.61e-21,120;CL:0002032,2.92e-21,161;CL:0000837,2.92e-21,161;CL:0000037,6.78e-20,168;CL:0002087,2.13e-18,115;CL:0000094,1.41e-11,8;CL:0000081,4.57e-11,11;CL:0000767,1.09e-08,3;CL:0000840,1.05e-07,5;CL:0001029,1.05e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;2.90e-35;42!CL:0000049;1.01e-09;108 | |ontology_enrichment_development_v019=CL:0002057;2.90e-35;42!CL:0000049;1.01e-09;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.25e-16!80;UBERON:0001474!6.23e-16!86;UBERON:0001049!3.39e-14!57;UBERON:0005068!3.39e-14!57;UBERON:0006241!3.39e-14!57;UBERON:0007135!3.39e-14!57;UBERON:0001017!1.59e-13!82;UBERON:0002390!3.21e-13!102;UBERON:0003061!3.21e-13!102;UBERON:0000073!4.97e-13!94;UBERON:0001016!4.97e-13!94;UBERON:0004765!6.40e-13!101;UBERON:0001434!6.40e-13!101;UBERON:0005743!1.91e-12!86;UBERON:0002193!1.20e-11!112;UBERON:0002616!3.47e-11!59;UBERON:0002346!5.21e-11!90;UBERON:0003075!8.72e-11!86;UBERON:0007284!8.72e-11!86;UBERON:0000955!1.29e-10!69;UBERON:0006238!1.29e-10!69;UBERON:0002405!1.81e-09!115;UBERON:0002780!6.27e-09!41;UBERON:0001890!6.27e-09!41;UBERON:0006240!6.27e-09!41;UBERON:0000924!7.48e-09!173;UBERON:0006601!7.48e-09!173;UBERON:0001893!1.32e-08!34;UBERON:0004121!1.39e-08!169;UBERON:0002020!1.48e-08!34;UBERON:0003528!1.48e-08!34;UBERON:0003080!1.82e-08!42;UBERON:0002791!3.64e-08!33;UBERON:0007023!7.85e-08!115;UBERON:0003076!1.05e-07!15;UBERON:0003057!1.05e-07!15;UBERON:0001869!1.27e-07!32;UBERON:0004732!5.26e-07!13;UBERON:0000033!8.50e-07!123 | |ontology_enrichment_uberon=UBERON:0002371!1.25e-16!80;UBERON:0001474!6.23e-16!86;UBERON:0001049!3.39e-14!57;UBERON:0005068!3.39e-14!57;UBERON:0006241!3.39e-14!57;UBERON:0007135!3.39e-14!57;UBERON:0001017!1.59e-13!82;UBERON:0002390!3.21e-13!102;UBERON:0003061!3.21e-13!102;UBERON:0000073!4.97e-13!94;UBERON:0001016!4.97e-13!94;UBERON:0004765!6.40e-13!101;UBERON:0001434!6.40e-13!101;UBERON:0005743!1.91e-12!86;UBERON:0002193!1.20e-11!112;UBERON:0002616!3.47e-11!59;UBERON:0002346!5.21e-11!90;UBERON:0003075!8.72e-11!86;UBERON:0007284!8.72e-11!86;UBERON:0000955!1.29e-10!69;UBERON:0006238!1.29e-10!69;UBERON:0002405!1.81e-09!115;UBERON:0002780!6.27e-09!41;UBERON:0001890!6.27e-09!41;UBERON:0006240!6.27e-09!41;UBERON:0000924!7.48e-09!173;UBERON:0006601!7.48e-09!173;UBERON:0001893!1.32e-08!34;UBERON:0004121!1.39e-08!169;UBERON:0002020!1.48e-08!34;UBERON:0003528!1.48e-08!34;UBERON:0003080!1.82e-08!42;UBERON:0002791!3.64e-08!33;UBERON:0007023!7.85e-08!115;UBERON:0003076!1.05e-07!15;UBERON:0003057!1.05e-07!15;UBERON:0001869!1.27e-07!32;UBERON:0004732!5.26e-07!13;UBERON:0000033!8.50e-07!123 | ||
|ontology_enrichment_uberon_v019=UBERON:0005162;6.53e-07;2!UBERON:0000122;6.53e-07;2!UBERON:0000200;7.50e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0005162;6.53e-07;2!UBERON:0000122;6.53e-07;2!UBERON:0000200;7.50e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.77e-37,76;UBERON:0001474,1.28e-33,82;UBERON:0002390,3.61e-32,98;UBERON:0003061,3.61e-32,98;UBERON:0004765,9.22e-30,90;UBERON:0002405,1.74e-28,93;UBERON:0002193,3.28e-28,108;UBERON:0001434,8.30e-26,100;UBERON:0002204,1.62e-12,167;UBERON:0003081,8.24e-12,203;UBERON:0001049,1.78e-08,56;UBERON:0005068,1.78e-08,56;UBERON:0006241,1.78e-08,56;UBERON:0007135,1.78e-08,56;UBERON:0001017,6.08e-08,81;UBERON:0001016,1.20e-07,89;UBERON:0000073,6.48e-07,53;UBERON:0002616,6.48e-07,53;UBERON:0005162,7.06e-07,2;UBERON:0000122,7.06e-07,2;UBERON:0000200,8.88e-07,6 | |||
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| ||
|short_description=p9@RALGDS | |short_description=p9@RALGDS | ||
}} | }} |
Latest revision as of 05:54, 16 September 2015
Short description: | p9@RALGDS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_RALGDS_5end |
Coexpression cluster: | C3606_CD14_Eosinophils_retina_Neutrophils_locus_pons_occipital |
Association with transcript: | 0bp_to_ENST00000493438_5end |
EntrezGene: | RALGDS |
HGNC: | 9842 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 4.52e-50 | 72 |
classical monocyte | 5.53e-48 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.53e-48 | 42 |
defensive cell | 1.59e-47 | 48 |
phagocyte | 1.59e-47 | 48 |
macrophage dendritic cell progenitor | 9.34e-46 | 61 |
granulocyte monocyte progenitor cell | 2.48e-43 | 67 |
monopoietic cell | 1.00e-41 | 59 |
monocyte | 1.00e-41 | 59 |
monoblast | 1.00e-41 | 59 |
promonocyte | 1.00e-41 | 59 |
myeloid lineage restricted progenitor cell | 9.61e-39 | 66 |
myeloid cell | 1.98e-35 | 108 |
common myeloid progenitor | 1.98e-35 | 108 |
leukocyte | 7.87e-26 | 136 |
hematopoietic cell | 6.36e-22 | 177 |
hematopoietic lineage restricted progenitor cell | 2.61e-21 | 120 |
hematopoietic oligopotent progenitor cell | 2.92e-21 | 161 |
hematopoietic multipotent progenitor cell | 2.92e-21 | 161 |
hematopoietic stem cell | 6.78e-20 | 168 |
nongranular leukocyte | 2.13e-18 | 115 |
granulocyte | 1.41e-11 | 8 |
blood cell | 4.57e-11 | 11 |
basophil | 1.09e-08 | 3 |
immature conventional dendritic cell | 1.05e-07 | 5 |
common dendritic progenitor | 1.05e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.77e-37 | 76 |
bone element | 1.28e-33 | 82 |
hematopoietic system | 3.61e-32 | 98 |
blood island | 3.61e-32 | 98 |
skeletal element | 9.22e-30 | 90 |
immune system | 1.74e-28 | 93 |
hemolymphoid system | 3.28e-28 | 108 |
skeletal system | 8.30e-26 | 100 |
musculoskeletal system | 1.62e-12 | 167 |
lateral plate mesoderm | 8.24e-12 | 203 |
neural tube | 1.78e-08 | 56 |
neural rod | 1.78e-08 | 56 |
future spinal cord | 1.78e-08 | 56 |
neural keel | 1.78e-08 | 56 |
central nervous system | 6.08e-08 | 81 |
nervous system | 1.20e-07 | 89 |
regional part of nervous system | 6.48e-07 | 53 |
regional part of brain | 6.48e-07 | 53 |
multi cell component structure | 7.06e-07 | 2 |
neuron projection bundle | 7.06e-07 | 2 |
gyrus | 8.88e-07 | 6 |