FFCP PHASE1:Hg19::chr1:115053782..115053853,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51592 | |EntrezGene=51592 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16290 | |HGNC=16290 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UPN9,B3KN30 | |UniProt=Q9UPN9,B3KN30 | ||
|association_with_transcript=-1bp_to_ENST00000358465,ENST00000369543,NM_015906,NM_033020,uc001eew.2,uc001eex.2_5end | |association_with_transcript=-1bp_to_ENST00000358465,ENST00000369543,NM_015906,NM_033020,uc001eew.2,uc001eex.2_5end | ||
|cluster_id=chr1:115053782..115053853,- | |||
|description=CAGE_peak_1_at_TRIM33_5end | |description=CAGE_peak_1_at_TRIM33_5end | ||
|id=chr1:115053782..115053853,- | |id=chr1:115053782..115053853,- | ||
|ontology_enrichment_celltype=CL:0000037!6.70e-23!172;CL:0000566!6.70e-23!172;CL:0002032!1.12e-22!165;CL:0000837!1.12e-22!165;CL:0000763!2.97e-19!112;CL:0000049!2.97e-19!112;CL:0000988!3.75e-19!182;CL:0000738!1.43e-17!140;CL:0002031!4.57e-16!124;CL:0002087!4.45e-15!119;CL:0000766!9.63e-15!76;CL:0000839!1.06e-12!70;CL:0000557!3.41e-12!71;CL:0000860!6.13e-12!45;CL:0002009!4.25e-11!65;CL:0002194!5.24e-11!63;CL:0000576!5.24e-11!63;CL:0000040!5.24e-11!63;CL:0000559!5.24e-11!63;CL:0002057!1.15e-10!42 | |ontology_enrichment_celltype=CL:0000037!6.70e-23!172;CL:0000566!6.70e-23!172;CL:0002032!1.12e-22!165;CL:0000837!1.12e-22!165;CL:0000763!2.97e-19!112;CL:0000049!2.97e-19!112;CL:0000988!3.75e-19!182;CL:0000738!1.43e-17!140;CL:0002031!4.57e-16!124;CL:0002087!4.45e-15!119;CL:0000766!9.63e-15!76;CL:0000839!1.06e-12!70;CL:0000557!3.41e-12!71;CL:0000860!6.13e-12!45;CL:0002009!4.25e-11!65;CL:0002194!5.24e-11!63;CL:0000576!5.24e-11!63;CL:0000040!5.24e-11!63;CL:0000559!5.24e-11!63;CL:0002057!1.15e-10!42 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.07e-09;33!CL:0002057;8.07e-09;33!CL:0000576;3.83e-08;48!CL:0000473;2.18e-07;39!CL:0000234;2.18e-07;39!CL:0000766;6.24e-07;69!CL:0000763;8.08e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,6.78e-22,168;CL:0002032,1.12e-21,161;CL:0000837,1.12e-21,161;CL:0000988,1.40e-18,177;CL:0000763,2.73e-18,108;CL:0000049,2.73e-18,108;CL:0000738,1.21e-16,136;CL:0002031,3.72e-15,120;CL:0002087,3.49e-14,115;CL:0000766,7.96e-14,72;CL:0000839,8.29e-12,66;CL:0000557,2.62e-11,67;CL:0000860,1.15e-10,42;CL:0002057,1.15e-10,42;CL:0000473,2.53e-10,48;CL:0000234,2.53e-10,48;CL:0002009,3.17e-10,61;CL:0002194,3.92e-10,59;CL:0000576,3.92e-10,59;CL:0000040,3.92e-10,59;CL:0000559,3.92e-10,59 | |||
|ontology_enrichment_development_v019=CL:0002057;4.39e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.03e-30!115;UBERON:0002390!1.23e-12!102;UBERON:0003061!1.23e-12!102;UBERON:0001049!1.82e-11!57;UBERON:0005068!1.82e-11!57;UBERON:0006241!1.82e-11!57;UBERON:0007135!1.82e-11!57;UBERON:0002193!3.93e-10!112;UBERON:0003080!4.00e-10!42;UBERON:0002780!7.34e-10!41;UBERON:0001890!7.34e-10!41;UBERON:0006240!7.34e-10!41;UBERON:0002616!1.66e-09!59;UBERON:0001017!5.20e-09!82;UBERON:0000955!8.48e-09!69;UBERON:0006238!8.48e-09!69;UBERON:0005743!9.65e-09!86;UBERON:0000073!1.28e-08!94;UBERON:0001016!1.28e-08!94;UBERON:0002020!7.39e-08!34;UBERON:0003528!7.39e-08!34;UBERON:0001474!1.03e-07!86;UBERON:0002371!1.17e-07!80;UBERON:0001893!1.42e-07!34;UBERON:0001869!1.90e-07!32;UBERON:0002791!2.40e-07!33;UBERON:0002619!6.08e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.07e-08;114!UBERON:0002780;1.44e-07;41!UBERON:0001890;1.44e-07;41!UBERON:0002619;6.46e-07;22!UBERON:0000073;7.29e-07;53!UBERON:0002616;7.29e-07;53!UBERON:0003528;8.19e-07;34!UBERON:0002020;8.19e-07;34!UBERON:0001869;8.84e-07;32!UBERON:0002791;9.19e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.97e-29,114;UBERON:0002390,8.91e-12,98;UBERON:0003061,8.91e-12,98;UBERON:0001049,3.34e-11,56;UBERON:0005068,3.34e-11,56;UBERON:0006241,3.34e-11,56;UBERON:0007135,3.34e-11,56;UBERON:0000073,1.08e-10,53;UBERON:0002616,1.08e-10,53;UBERON:0002780,7.34e-10,41;UBERON:0001890,7.34e-10,41;UBERON:0003080,7.34e-10,41;UBERON:0006240,7.34e-10,41;UBERON:0002193,2.39e-09,108;UBERON:0001017,8.83e-09,81;UBERON:0001016,1.25e-08,89;UBERON:0000955,1.46e-08,68;UBERON:0006238,1.46e-08,68;UBERON:0003528,7.39e-08,34;UBERON:0002020,7.39e-08,34;UBERON:0001893,1.42e-07,34;UBERON:0001869,1.90e-07,32;UBERON:0002791,2.43e-07,32;UBERON:0001474,5.66e-07,82;UBERON:0002619,6.08e-07,22;UBERON:0002371,6.58e-07,76 | |||
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| ||
|short_description=p1@TRIM33 | |short_description=p1@TRIM33 | ||
}} | }} |
Latest revision as of 07:04, 16 September 2015
Short description: | p1@TRIM33 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TRIM33_5end |
Coexpression cluster: | NA |
Association with transcript: | -1bp_to_ENST00000358465, ENST00000369543, NM_015906, NM_033020, uc001eew.2, uc001eex.2_5end |
EntrezGene: | TRIM33 |
HGNC: | 16290 |
UniProt: | Q9UPN9B3KN30 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 6.78e-22 | 168 |
hematopoietic oligopotent progenitor cell | 1.12e-21 | 161 |
hematopoietic multipotent progenitor cell | 1.12e-21 | 161 |
hematopoietic cell | 1.40e-18 | 177 |
myeloid cell | 2.73e-18 | 108 |
common myeloid progenitor | 2.73e-18 | 108 |
leukocyte | 1.21e-16 | 136 |
hematopoietic lineage restricted progenitor cell | 3.72e-15 | 120 |
nongranular leukocyte | 3.49e-14 | 115 |
myeloid leukocyte | 7.96e-14 | 72 |
myeloid lineage restricted progenitor cell | 8.29e-12 | 66 |
granulocyte monocyte progenitor cell | 2.62e-11 | 67 |
classical monocyte | 1.15e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.15e-10 | 42 |
defensive cell | 2.53e-10 | 48 |
phagocyte | 2.53e-10 | 48 |
macrophage dendritic cell progenitor | 3.17e-10 | 61 |
monopoietic cell | 3.92e-10 | 59 |
monocyte | 3.92e-10 | 59 |
monoblast | 3.92e-10 | 59 |
promonocyte | 3.92e-10 | 59 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.97e-29 | 114 |
hematopoietic system | 8.91e-12 | 98 |
blood island | 8.91e-12 | 98 |
neural tube | 3.34e-11 | 56 |
neural rod | 3.34e-11 | 56 |
future spinal cord | 3.34e-11 | 56 |
neural keel | 3.34e-11 | 56 |
regional part of nervous system | 1.08e-10 | 53 |
regional part of brain | 1.08e-10 | 53 |
regional part of forebrain | 7.34e-10 | 41 |
forebrain | 7.34e-10 | 41 |
anterior neural tube | 7.34e-10 | 41 |
future forebrain | 7.34e-10 | 41 |
hemolymphoid system | 2.39e-09 | 108 |
central nervous system | 8.83e-09 | 81 |
nervous system | 1.25e-08 | 89 |
brain | 1.46e-08 | 68 |
future brain | 1.46e-08 | 68 |
brain grey matter | 7.39e-08 | 34 |
gray matter | 7.39e-08 | 34 |
telencephalon | 1.42e-07 | 34 |
cerebral hemisphere | 1.90e-07 | 32 |
regional part of telencephalon | 2.43e-07 | 32 |
bone element | 5.66e-07 | 82 |
regional part of cerebral cortex | 6.08e-07 | 22 |
bone marrow | 6.58e-07 | 76 |