FFCP PHASE1:Hg19::chr12:110562213..110562251,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=28981 | |EntrezGene=28981 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14313 | |HGNC=14313 | ||
|TSSclassifier=strong | |||
|UniProt=F8W1J4 | |UniProt=F8W1J4 | ||
|association_with_transcript=16bp_to_ENST00000546374_5end | |association_with_transcript=16bp_to_ENST00000546374_5end | ||
|cluster_id=chr12:110562213..110562251,+ | |||
|description=CAGE_peak_2_at_IFT81_5end | |description=CAGE_peak_2_at_IFT81_5end | ||
|id=chr12:110562213..110562251,+ | |id=chr12:110562213..110562251,+ | ||
|ontology_enrichment_celltype=CL:0000133!3.91e-10!59;CL:0000055!6.54e-08!180;CL:0000333!1.44e-07!41;CL:0000221!4.04e-07!71 | |ontology_enrichment_celltype=CL:0000133!3.91e-10!59;CL:0000055!6.54e-08!180;CL:0000333!1.44e-07!41;CL:0000221!4.04e-07!71 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000133,1.66e-09,59;CL:0000333,3.12e-07,41 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000924!9.04e-17!173;UBERON:0006601!9.04e-17!173;UBERON:0004121!1.28e-15!169;UBERON:0000073!1.39e-14!94;UBERON:0001016!1.39e-14!94;UBERON:0001017!1.48e-13!82;UBERON:0005743!1.64e-13!86;UBERON:0000033!6.82e-12!123;UBERON:0000475!1.74e-11!365;UBERON:0000153!2.84e-11!129;UBERON:0007811!2.84e-11!129;UBERON:0000955!6.31e-11!69;UBERON:0006238!6.31e-11!69;UBERON:0002346!3.09e-10!90;UBERON:0001049!1.70e-09!57;UBERON:0005068!1.70e-09!57;UBERON:0006241!1.70e-09!57;UBERON:0007135!1.70e-09!57;UBERON:0003075!3.63e-09!86;UBERON:0007284!3.63e-09!86;UBERON:0002616!7.16e-09!59;UBERON:0003056!8.04e-09!61;UBERON:0002780!1.23e-08!41;UBERON:0001890!1.23e-08!41;UBERON:0006240!1.23e-08!41;UBERON:0003080!1.61e-08!42;UBERON:0001869!3.55e-08!32;UBERON:0000481!8.86e-08!347;UBERON:0002020!1.12e-07!34;UBERON:0003528!1.12e-07!34;UBERON:0001893!1.23e-07!34;UBERON:0000062!1.26e-07!511;UBERON:0002791!1.49e-07!33;UBERON:0000468!5.01e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.21e-07;32!UBERON:0002791;2.97e-07;32!UBERON:0002780;7.38e-07;41!UBERON:0001890;7.38e-07;41!UBERON:0003528;7.59e-07;34!UBERON:0002020;7.59e-07;34!UBERON:0001893;9.93e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,4.59e-17,171;UBERON:0000924,4.59e-17,171;UBERON:0006601,4.59e-17,171;UBERON:0001016,1.21e-15,89;UBERON:0001017,2.56e-14,81;UBERON:0011216,7.40e-12,223;UBERON:0000955,1.69e-11,68;UBERON:0006238,1.69e-11,68;UBERON:0002346,1.66e-10,86;UBERON:0001049,3.18e-10,56;UBERON:0005068,3.18e-10,56;UBERON:0006241,3.18e-10,56;UBERON:0007135,3.18e-10,56;UBERON:0010371,5.70e-10,104;UBERON:0000073,6.06e-10,53;UBERON:0002616,6.06e-10,53;UBERON:0003075,2.31e-09,82;UBERON:0007284,2.31e-09,82;UBERON:0002780,2.36e-09,41;UBERON:0001890,2.36e-09,41;UBERON:0003080,2.36e-09,41;UBERON:0006240,2.36e-09,41;UBERON:0003056,9.23e-09,61;UBERON:0001869,1.18e-08,32;UBERON:0002791,2.69e-08,32;UBERON:0003528,4.05e-08,34;UBERON:0002020,4.05e-08,34;UBERON:0001893,4.46e-08,34;UBERON:0010314,5.01e-08,132 | |||
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| ||
|short_description=p2@IFT81 | |short_description=p2@IFT81 | ||
}} | }} |
Latest revision as of 07:55, 16 September 2015
Short description: | p2@IFT81 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_IFT81_5end |
Coexpression cluster: | NA |
Association with transcript: | 16bp_to_ENST00000546374_5end |
EntrezGene: | IFT81 |
HGNC: | 14313 |
UniProt: | F8W1J4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 1.66e-09 | 59 |
migratory neural crest cell | 3.12e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 4.59e-17 | 171 |
ectoderm | 4.59e-17 | 171 |
presumptive ectoderm | 4.59e-17 | 171 |
nervous system | 1.21e-15 | 89 |
central nervous system | 2.56e-14 | 81 |
organ system subdivision | 7.40e-12 | 223 |
brain | 1.69e-11 | 68 |
future brain | 1.69e-11 | 68 |
neurectoderm | 1.66e-10 | 86 |
neural tube | 3.18e-10 | 56 |
neural rod | 3.18e-10 | 56 |
future spinal cord | 3.18e-10 | 56 |
neural keel | 3.18e-10 | 56 |
ecto-epithelium | 5.70e-10 | 104 |
regional part of nervous system | 6.06e-10 | 53 |
regional part of brain | 6.06e-10 | 53 |
neural plate | 2.31e-09 | 82 |
presumptive neural plate | 2.31e-09 | 82 |
regional part of forebrain | 2.36e-09 | 41 |
forebrain | 2.36e-09 | 41 |
anterior neural tube | 2.36e-09 | 41 |
future forebrain | 2.36e-09 | 41 |
pre-chordal neural plate | 9.23e-09 | 61 |
cerebral hemisphere | 1.18e-08 | 32 |
regional part of telencephalon | 2.69e-08 | 32 |
brain grey matter | 4.05e-08 | 34 |
gray matter | 4.05e-08 | 34 |
telencephalon | 4.46e-08 | 34 |
structure with developmental contribution from neural crest | 5.01e-08 | 132 |