FFCP PHASE1:Hg19::chr1:116383322..116383333,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4808 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7818 | |||
|TSSclassifier=strong | |||
|UniProt=Q02577 | |||
|association_with_transcript=0bp_to_NM_001111061,uc009wgz.2_5end | |||
|cluster_id=chr1:116383322..116383333,- | |||
|description=CAGE_peak_6_at_NHLH2_5end | |||
|id=chr1:116383322..116383333,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;6.34e-08;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.84e-98;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;8.25e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,8.48e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0001049!5.16e-65!57;UBERON:0005068!5.16e-65!57;UBERON:0006241!5.16e-65!57;UBERON:0007135!5.16e-65!57;UBERON:0000073!2.77e-54!94;UBERON:0001016!2.77e-54!94;UBERON:0002616!5.17e-50!59;UBERON:0001017!1.65e-49!82;UBERON:0005743!6.19e-47!86;UBERON:0001950!3.10e-45!20;UBERON:0000955!8.21e-45!69;UBERON:0006238!8.21e-45!69;UBERON:0003075!4.42e-41!86;UBERON:0007284!4.42e-41!86;UBERON:0002619!5.23e-41!22;UBERON:0002346!5.62e-39!90;UBERON:0002020!5.57e-38!34;UBERON:0003528!5.57e-38!34;UBERON:0003076!5.61e-36!15;UBERON:0003057!5.61e-36!15;UBERON:0000956!6.94e-36!25;UBERON:0000203!6.94e-36!25;UBERON:0001869!9.71e-36!32;UBERON:0002780!9.65e-35!41;UBERON:0001890!9.65e-35!41;UBERON:0006240!9.65e-35!41;UBERON:0007023!4.59e-34!115;UBERON:0003080!7.88e-34!42;UBERON:0001893!1.80e-33!34;UBERON:0002791!2.03e-30!33;UBERON:0004121!3.22e-29!169;UBERON:0000924!2.23e-28!173;UBERON:0006601!2.23e-28!173;UBERON:0000033!1.26e-24!123;UBERON:0004733!2.24e-24!12;UBERON:0002028!2.24e-24!12;UBERON:0007277!2.24e-24!12;UBERON:0000153!3.39e-23!129;UBERON:0007811!3.39e-23!129;UBERON:0004732!2.11e-22!13;UBERON:0003056!4.24e-22!61;UBERON:0001871!5.04e-20!7;UBERON:0002680!3.38e-19!9;UBERON:0001895!3.38e-19!9;UBERON:0010092!3.38e-19!9;UBERON:0000200!1.06e-18!6;UBERON:0000025!8.40e-16!194;UBERON:0000988!3.42e-15!3;UBERON:0001872!5.56e-15!5;UBERON:0002298!1.79e-14!8;UBERON:0002240!2.21e-14!3;UBERON:0002771!4.02e-14!3;UBERON:0004111!1.92e-12!241;UBERON:0002148!1.14e-10!2;UBERON:0009662!1.14e-10!2;UBERON:0001876!2.21e-10!2;UBERON:0000477!2.68e-10!286;UBERON:0000483!5.22e-09!309;UBERON:0002021!6.88e-09!5;UBERON:0000119!7.45e-09!312;UBERON:0000349!7.87e-09!5;UBERON:0005174!8.09e-09!5;UBERON:0001137!8.09e-09!5;UBERON:0000064!3.26e-08!219;UBERON:0000010!3.33e-08!8;UBERON:0002037!4.71e-08!6;UBERON:0006215!4.71e-08!6;UBERON:0006331!2.22e-07!3;UBERON:0000475!3.09e-07!365;UBERON:0001896!7.58e-07!3;UBERON:0005290!7.58e-07!3;UBERON:0010096!7.58e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;8.16e-50;6!UBERON:0002680;1.46e-33;9!UBERON:0001895;1.46e-33;9!UBERON:0004733;2.05e-25;12!UBERON:0002028;2.05e-25;12!UBERON:0004732;1.56e-23;13!UBERON:0001897;1.17e-17;2!UBERON:0010225;1.17e-17;2!UBERON:0002784;1.63e-09;4!UBERON:0000013;6.34e-08;5!UBERON:0002410;6.34e-08;5!UBERON:0000073;1.92e-07;53!UBERON:0002616;1.92e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,8.88e-50,6;UBERON:0006215,8.88e-50,6;UBERON:0002680,1.55e-33,9;UBERON:0001895,1.55e-33,9;UBERON:0010092,1.55e-33,9;UBERON:0004733,2.14e-25,12;UBERON:0002028,2.14e-25,12;UBERON:0007277,2.14e-25,12;UBERON:0004732,1.62e-23,13;UBERON:0003076,1.68e-20,15;UBERON:0003057,1.68e-20,15;UBERON:0001897,1.07e-17,2;UBERON:0010225,1.07e-17,2;UBERON:0000073,2.46e-10,53;UBERON:0002616,2.46e-10,53;UBERON:0001049,8.06e-10,56;UBERON:0005068,8.06e-10,56;UBERON:0006241,8.06e-10,56;UBERON:0007135,8.06e-10,56;UBERON:0002784,1.57e-09,4;UBERON:0001016,2.09e-09,89;UBERON:0000955,4.31e-08,68;UBERON:0006238,4.31e-08,68;UBERON:0000013,6.55e-08,5;UBERON:0002410,6.55e-08,5;UBERON:0001017,6.74e-07,81;UBERON:0003075,6.74e-07,82;UBERON:0007284,6.74e-07,82 | |||
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|short_description=p6@NHLH2 | |||
}} |
Latest revision as of 08:13, 16 September 2015
Short description: | p6@NHLH2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_NHLH2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001111061, uc009wgz.2_5end |
EntrezGene: | NHLH2 |
HGNC: | 7818 |
UniProt: | Q02577 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 8.88e-50 | 6 |
rhombic lip | 8.88e-50 | 6 |
regional part of metencephalon | 1.55e-33 | 9 |
metencephalon | 1.55e-33 | 9 |
future metencephalon | 1.55e-33 | 9 |
segmental subdivision of hindbrain | 2.14e-25 | 12 |
hindbrain | 2.14e-25 | 12 |
presumptive hindbrain | 2.14e-25 | 12 |
segmental subdivision of nervous system | 1.62e-23 | 13 |
posterior neural tube | 1.68e-20 | 15 |
chordal neural plate | 1.68e-20 | 15 |
dorsal plus ventral thalamus | 1.07e-17 | 2 |
thalamic complex | 1.07e-17 | 2 |
regional part of nervous system | 2.46e-10 | 53 |
regional part of brain | 2.46e-10 | 53 |
neural tube | 8.06e-10 | 56 |
neural rod | 8.06e-10 | 56 |
future spinal cord | 8.06e-10 | 56 |
neural keel | 8.06e-10 | 56 |
regional part of diencephalon | 1.57e-09 | 4 |
nervous system | 2.09e-09 | 89 |
brain | 4.31e-08 | 68 |
future brain | 4.31e-08 | 68 |
sympathetic nervous system | 6.55e-08 | 5 |
autonomic nervous system | 6.55e-08 | 5 |
central nervous system | 6.74e-07 | 81 |
neural plate | 6.74e-07 | 82 |
presumptive neural plate | 6.74e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 8.48e-07 | 6 |