FFCP PHASE1:Hg19::chr2:242295693..242295715,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:242295693..242295715,+
|short_description=p1@FARP2
|description=CAGE_peak_1_at_FARP2_5end
|association_with_transcript=0bp_to_ENST00000373287,ENST000004784...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9855 | |EntrezGene=9855 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16460 | |HGNC=16460 | ||
|TSSclassifier=strong | |||
|UniProt=F5GZ84,O94887 | |UniProt=F5GZ84,O94887 | ||
|association_with_transcript=0bp_to_ENST00000373287,ENST00000478489,ENST00000479427,ENST00000545004,uc002wbi.1,uc010zoq.1,uc010zor.1_5end | |||
|cluster_id=chr2:242295693..242295715,+ | |||
|description=CAGE_peak_1_at_FARP2_5end | |||
|id=chr2:242295693..242295715,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.67e-11!57;UBERON:0005068!2.67e-11!57;UBERON:0006241!2.67e-11!57;UBERON:0007135!2.67e-11!57;UBERON:0002616!1.10e-10!59;UBERON:0000955!1.25e-10!69;UBERON:0006238!1.25e-10!69;UBERON:0007023!6.99e-10!115;UBERON:0001017!1.46e-09!82;UBERON:0004121!5.62e-09!169;UBERON:0003075!8.94e-09!86;UBERON:0007284!8.94e-09!86;UBERON:0000924!9.91e-09!173;UBERON:0006601!9.91e-09!173;UBERON:0005743!1.23e-08!86;UBERON:0000073!2.27e-08!94;UBERON:0001016!2.27e-08!94;UBERON:0002346!2.42e-08!90;UBERON:0000033!6.32e-08!123;UBERON:0000025!1.36e-07!194;UBERON:0000153!3.91e-07!129;UBERON:0007811!3.91e-07!129;UBERON:0000475!5.18e-07!365;UBERON:0003076!5.40e-07!15;UBERON:0003057!5.40e-07!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010371,1.28e-11,104;UBERON:0001049,1.87e-11,56;UBERON:0005068,1.87e-11,56;UBERON:0006241,1.87e-11,56;UBERON:0007135,1.87e-11,56;UBERON:0000955,9.59e-11,68;UBERON:0006238,9.59e-11,68;UBERON:0000073,2.33e-10,53;UBERON:0002616,2.33e-10,53;UBERON:0007023,1.18e-09,114;UBERON:0001017,1.21e-09,81;UBERON:0003075,2.06e-09,82;UBERON:0007284,2.06e-09,82;UBERON:0001016,2.77e-09,89;UBERON:0011216,2.88e-09,223;UBERON:0004121,3.02e-09,171;UBERON:0000924,3.02e-09,171;UBERON:0006601,3.02e-09,171;UBERON:0002346,6.24e-09,86;UBERON:0000025,1.54e-07,192;UBERON:0003076,5.40e-07,15;UBERON:0003057,5.40e-07,15 | |||
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| ||
|short_description=p1@FARP2 | |||
}} | }} |
Latest revision as of 10:32, 16 September 2015
Short description: | p1@FARP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FARP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000373287, ENST00000478489, ENST00000479427, ENST00000545004, uc002wbi.1, uc010zoq.1, uc010zor.1_5end |
EntrezGene: | FARP2 |
HGNC: | 16460 |
UniProt: | F5GZ84O94887 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ecto-epithelium | 1.28e-11 | 104 |
neural tube | 1.87e-11 | 56 |
neural rod | 1.87e-11 | 56 |
future spinal cord | 1.87e-11 | 56 |
neural keel | 1.87e-11 | 56 |
brain | 9.59e-11 | 68 |
future brain | 9.59e-11 | 68 |
regional part of nervous system | 2.33e-10 | 53 |
regional part of brain | 2.33e-10 | 53 |
adult organism | 1.18e-09 | 114 |
central nervous system | 1.21e-09 | 81 |
neural plate | 2.06e-09 | 82 |
presumptive neural plate | 2.06e-09 | 82 |
nervous system | 2.77e-09 | 89 |
organ system subdivision | 2.88e-09 | 223 |
ectoderm-derived structure | 3.02e-09 | 171 |
ectoderm | 3.02e-09 | 171 |
presumptive ectoderm | 3.02e-09 | 171 |
neurectoderm | 6.24e-09 | 86 |
tube | 1.54e-07 | 192 |
posterior neural tube | 5.40e-07 | 15 |
chordal neural plate | 5.40e-07 | 15 |