FFCP PHASE1:Hg19::chr2:242641442..242641478,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84289 | |EntrezGene=84289 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19421 | |HGNC=19421 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WYH8,E9PEN0,Q53NU6 | |UniProt=Q8WYH8,E9PEN0,Q53NU6 | ||
|association_with_transcript=0bp_to_ENST00000313552,ENST00000406941,ENST00000445620,ENST00000482774,ENST00000492488,ENST00000493261,NM_032329,uc002wcc.1,uc002wcd.2_5end | |association_with_transcript=0bp_to_ENST00000313552,ENST00000406941,ENST00000445620,ENST00000482774,ENST00000492488,ENST00000493261,NM_032329,uc002wcc.1,uc002wcd.2_5end | ||
|cluster_id=chr2:242641442..242641478,+ | |||
|description=CAGE_peak_1_at_ING5_5end | |description=CAGE_peak_1_at_ING5_5end | ||
|id=chr2:242641442..242641478,+ | |id=chr2:242641442..242641478,+ | ||
|ontology_enrichment_celltype=CL:0000542!5.07e-11!53;CL:0000051!5.07e-11!53;CL:0000838!1.50e-10!52;CL:0000945!7.55e-07!24;CL:0000826!7.55e-07!24 | |ontology_enrichment_celltype=CL:0000542!5.07e-11!53;CL:0000051!5.07e-11!53;CL:0000838!1.50e-10!52;CL:0000945!7.55e-07!24;CL:0000826!7.55e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000542;4.23e-07;53!CL:0000945;9.35e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,5.07e-11,53;CL:0000051,5.07e-11,53;CL:0000838,1.50e-10,52;CL:0000037,5.91e-07,168;CL:0000945,7.55e-07,24;CL:0000826,7.55e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000051;4.23e-07;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.34e-16!115;UBERON:0000073!8.51e-15!94;UBERON:0001016!8.51e-15!94;UBERON:0001049!1.07e-14!57;UBERON:0005068!1.07e-14!57;UBERON:0006241!1.07e-14!57;UBERON:0007135!1.07e-14!57;UBERON:0005743!1.44e-13!86;UBERON:0001017!4.05e-13!82;UBERON:0002346!1.07e-12!90;UBERON:0002780!1.08e-12!41;UBERON:0001890!1.08e-12!41;UBERON:0006240!1.08e-12!41;UBERON:0002616!2.42e-12!59;UBERON:0000955!7.29e-12!69;UBERON:0006238!7.29e-12!69;UBERON:0003080!8.38e-12!42;UBERON:0003075!3.20e-11!86;UBERON:0007284!3.20e-11!86;UBERON:0001893!8.14e-11!34;UBERON:0002020!2.19e-10!34;UBERON:0003528!2.19e-10!34;UBERON:0002791!2.40e-10!33;UBERON:0001869!6.83e-10!32;UBERON:0003056!5.26e-09!61;UBERON:0000956!4.44e-07!25;UBERON:0000203!4.44e-07!25;UBERON:0002619!8.32e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;2.53e-09;53!UBERON:0002616;2.53e-09;53!UBERON:0001893;2.78e-09;34!UBERON:0002780;3.93e-09;41!UBERON:0001890;3.93e-09;41!UBERON:0003528;5.22e-09;34!UBERON:0002020;5.22e-09;34!UBERON:0002791;1.19e-08;32!UBERON:0001869;1.32e-08;32!UBERON:0000956;7.10e-07;25!UBERON:0000203;7.10e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.59e-16,114;UBERON:0001049,1.50e-15,56;UBERON:0005068,1.50e-15,56;UBERON:0006241,1.50e-15,56;UBERON:0007135,1.50e-15,56;UBERON:0000073,4.59e-15,53;UBERON:0002616,4.59e-15,53;UBERON:0001016,5.75e-15,89;UBERON:0002346,4.52e-14,86;UBERON:0001017,9.47e-14,81;UBERON:0002780,1.08e-12,41;UBERON:0001890,1.08e-12,41;UBERON:0003080,1.08e-12,41;UBERON:0006240,1.08e-12,41;UBERON:0000955,1.62e-12,68;UBERON:0006238,1.62e-12,68;UBERON:0003075,1.63e-12,82;UBERON:0007284,1.63e-12,82;UBERON:0001893,8.14e-11,34;UBERON:0003528,2.19e-10,34;UBERON:0002020,2.19e-10,34;UBERON:0003056,6.66e-10,61;UBERON:0001869,6.83e-10,32;UBERON:0002791,7.29e-10,32;UBERON:0010371,2.03e-08,104;UBERON:0011216,2.63e-07,223;UBERON:0000956,4.44e-07,25;UBERON:0000203,4.44e-07,25;UBERON:0002619,8.32e-07,22;UBERON:0004121,8.71e-07,171;UBERON:0000924,8.71e-07,171;UBERON:0006601,8.71e-07,171 | |||
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| ||
|short_description=p1@ING5 | |short_description=p1@ING5 | ||
}} | }} |
Latest revision as of 11:10, 16 September 2015
Short description: | p1@ING5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ING5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000313552, ENST00000406941, ENST00000445620, ENST00000482774, ENST00000492488, ENST00000493261, NM_032329, uc002wcc.1, uc002wcd.2_5end |
EntrezGene: | ING5 |
HGNC: | 19421 |
UniProt: | Q8WYH8E9PEN0Q53NU6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 5.07e-11 | 53 |
common lymphoid progenitor | 5.07e-11 | 53 |
lymphoid lineage restricted progenitor cell | 1.50e-10 | 52 |
hematopoietic stem cell | 5.91e-07 | 168 |
lymphocyte of B lineage | 7.55e-07 | 24 |
pro-B cell | 7.55e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.59e-16 | 114 |
neural tube | 1.50e-15 | 56 |
neural rod | 1.50e-15 | 56 |
future spinal cord | 1.50e-15 | 56 |
neural keel | 1.50e-15 | 56 |
regional part of nervous system | 4.59e-15 | 53 |
regional part of brain | 4.59e-15 | 53 |
nervous system | 5.75e-15 | 89 |
neurectoderm | 4.52e-14 | 86 |
central nervous system | 9.47e-14 | 81 |
regional part of forebrain | 1.08e-12 | 41 |
forebrain | 1.08e-12 | 41 |
anterior neural tube | 1.08e-12 | 41 |
future forebrain | 1.08e-12 | 41 |
brain | 1.62e-12 | 68 |
future brain | 1.62e-12 | 68 |
neural plate | 1.63e-12 | 82 |
presumptive neural plate | 1.63e-12 | 82 |
telencephalon | 8.14e-11 | 34 |
brain grey matter | 2.19e-10 | 34 |
gray matter | 2.19e-10 | 34 |
pre-chordal neural plate | 6.66e-10 | 61 |
cerebral hemisphere | 6.83e-10 | 32 |
regional part of telencephalon | 7.29e-10 | 32 |
ecto-epithelium | 2.03e-08 | 104 |
organ system subdivision | 2.63e-07 | 223 |
cerebral cortex | 4.44e-07 | 25 |
pallium | 4.44e-07 | 25 |
regional part of cerebral cortex | 8.32e-07 | 22 |
ectoderm-derived structure | 8.71e-07 | 171 |
ectoderm | 8.71e-07 | 171 |
presumptive ectoderm | 8.71e-07 | 171 |