FFCP PHASE1:Hg19::chr10:115614370..115614436,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=374354 | |EntrezGene=374354 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24731 | |HGNC=24731 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NBF2,Q7Z658 | |UniProt=Q8NBF2,Q7Z658 | ||
|association_with_transcript=0bp_to_ENST00000369301,NM_198514,uc001lax.1_5end | |||
|cluster_id=chr10:115614370..115614436,+ | |||
|description=CAGE_peak_1_at_NHLRC2_5end | |||
|id=chr10:115614370..115614436,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.42e-26!115;UBERON:0001049!3.72e-09!57;UBERON:0005068!3.72e-09!57;UBERON:0006241!3.72e-09!57;UBERON:0007135!3.72e-09!57;UBERON:0000073!8.74e-09!94;UBERON:0001016!8.74e-09!94;UBERON:0000153!1.15e-08!129;UBERON:0007811!1.15e-08!129;UBERON:0005743!1.74e-08!86;UBERON:0000924!1.77e-08!173;UBERON:0006601!1.77e-08!173;UBERON:0003080!2.36e-08!42;UBERON:0001017!2.77e-08!82;UBERON:0002780!3.13e-08!41;UBERON:0001890!3.13e-08!41;UBERON:0006240!3.13e-08!41;UBERON:0002616!3.37e-08!59;UBERON:0000033!4.31e-08!123;UBERON:0000955!5.67e-08!69;UBERON:0006238!5.67e-08!69;UBERON:0002346!8.57e-08!90;UBERON:0004121!9.89e-08!169;UBERON:0003075!5.99e-07!86;UBERON:0007284!5.99e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.57e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.81e-26,114;UBERON:0001049,4.99e-09,56;UBERON:0005068,4.99e-09,56;UBERON:0006241,4.99e-09,56;UBERON:0007135,4.99e-09,56;UBERON:0011216,1.37e-08,223;UBERON:0001016,1.88e-08,89;UBERON:0004121,2.15e-08,171;UBERON:0000924,2.15e-08,171;UBERON:0006601,2.15e-08,171;UBERON:0002780,3.13e-08,41;UBERON:0001890,3.13e-08,41;UBERON:0003080,3.13e-08,41;UBERON:0006240,3.13e-08,41;UBERON:0001017,3.68e-08,81;UBERON:0000073,4.15e-08,53;UBERON:0002616,4.15e-08,53;UBERON:0002346,4.44e-08,86;UBERON:0000955,7.54e-08,68;UBERON:0006238,7.54e-08,68;UBERON:0003075,3.27e-07,82;UBERON:0007284,3.27e-07,82 | |||
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| ||
|short_description=p1@NHLRC2 | |||
}} | }} |
Latest revision as of 12:09, 16 September 2015
Short description: | p1@NHLRC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NHLRC2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000369301, NM_198514, uc001lax.1_5end |
EntrezGene: | NHLRC2 |
HGNC: | 24731 |
UniProt: | Q8NBF2Q7Z658 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.81e-26 | 114 |
neural tube | 4.99e-09 | 56 |
neural rod | 4.99e-09 | 56 |
future spinal cord | 4.99e-09 | 56 |
neural keel | 4.99e-09 | 56 |
organ system subdivision | 1.37e-08 | 223 |
nervous system | 1.88e-08 | 89 |
ectoderm-derived structure | 2.15e-08 | 171 |
ectoderm | 2.15e-08 | 171 |
presumptive ectoderm | 2.15e-08 | 171 |
regional part of forebrain | 3.13e-08 | 41 |
forebrain | 3.13e-08 | 41 |
anterior neural tube | 3.13e-08 | 41 |
future forebrain | 3.13e-08 | 41 |
central nervous system | 3.68e-08 | 81 |
regional part of nervous system | 4.15e-08 | 53 |
regional part of brain | 4.15e-08 | 53 |
neurectoderm | 4.44e-08 | 86 |
brain | 7.54e-08 | 68 |
future brain | 7.54e-08 | 68 |
neural plate | 3.27e-07 | 82 |
presumptive neural plate | 3.27e-07 | 82 |