FFCP PHASE1:Hg19::chr20:44258371..44258390,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr20:44258371..44258390,+
|short_description=p1@WFDC10A
|description=CAGE_peak_1_at_WFDC10A_5end
|association_with_transcript=0bp_to_NM_080753,uc002xoz.2_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=140832 | |EntrezGene=140832 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16139 | |HGNC=16139 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H1F0 | |UniProt=Q9H1F0 | ||
|association_with_transcript=0bp_to_NM_080753,uc002xoz.2_5end | |||
|cluster_id=chr20:44258371..44258390,+ | |||
|coexpression_cluster_id=C39 | |||
|description=CAGE_peak_1_at_WFDC10A_5end | |||
|id=chr20:44258371..44258390,+ | |||
|ontology_enrichment_celltype=CL:0002274!1.08e-09!5;CL:0000457!1.08e-09!5;CL:0002191!1.08e-09!5;CL:0000097!1.08e-09!5;CL:0000831!1.08e-09!5;CL:0002028!1.08e-09!5 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;5.97e-34;1!UBERON:0007297;5.48e-18;2!UBERON:0003056;2.74e-12;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;1.50e-09;4!DOID:1612;1.50e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.32e-09,4;DOID:1612,1.32e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0001950!1.27e-31!20;UBERON:0002619!1.18e-28!22;UBERON:0001869!2.84e-26!32;UBERON:0000956!4.63e-25!25;UBERON:0000203!4.63e-25!25;UBERON:0001893!1.35e-24!34;UBERON:0002791!9.16e-22!33;UBERON:0002020!4.60e-21!34;UBERON:0003528!4.60e-21!34;UBERON:0000200!2.57e-20!6;UBERON:0002780!5.47e-20!41;UBERON:0001890!5.47e-20!41;UBERON:0006240!5.47e-20!41;UBERON:0003080!1.88e-19!42;UBERON:0007023!7.63e-18!115;UBERON:0001872!1.88e-16!5;UBERON:0002771!3.27e-15!3;UBERON:0001017!4.91e-15!82;UBERON:0001871!5.08e-15!7;UBERON:0000955!2.55e-14!69;UBERON:0006238!2.55e-14!69;UBERON:0000073!3.53e-14!94;UBERON:0001016!3.53e-14!94;UBERON:0005743!3.61e-14!86;UBERON:0001049!1.22e-13!57;UBERON:0005068!1.22e-13!57;UBERON:0006241!1.22e-13!57;UBERON:0007135!1.22e-13!57;UBERON:0002616!4.35e-13!59;UBERON:0003056!1.44e-12!61;UBERON:0003135!9.18e-12!11;UBERON:0003101!2.04e-10!22;UBERON:0000079!2.04e-10!22;UBERON:0003075!1.64e-09!86;UBERON:0007284!1.64e-09!86;UBERON:0002346!5.90e-09!90;UBERON:0006947!4.00e-08!3;UBERON:0004054!4.00e-08!3;UBERON:0001301!9.91e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;4.99e-45;3!UBERON:0004054;4.99e-45;3!UBERON:0001301;1.84e-34;1!UBERON:0001000;2.58e-34;1!UBERON:0005352;2.58e-34;1!UBERON:0005904;4.28e-34;4!UBERON:0000941;5.97e-34;1!UBERON:0001785;5.97e-34;1!UBERON:0002464;5.97e-34;1!UBERON:0004904;5.97e-34;1!UBERON:0001021;5.97e-34;1!UBERON:0003714;9.86e-18;2!UBERON:0005162;9.86e-18;2!UBERON:0000122;9.86e-18;2!UBERON:0000058;2.49e-14;10!UBERON:0003135;4.00e-13;11!UBERON:0001872;6.78e-08;5!UBERON:0002021;6.78e-08;5!UBERON:0004175;2.44e-07;21!UBERON:0001950;2.95e-07;20!UBERON:0003101;4.79e-07;22!UBERON:0000079;4.79e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,5.00e-45,3;UBERON:0004054,5.00e-45,3;UBERON:0001301,1.84e-34,1;UBERON:0001000,2.58e-34,1;UBERON:0005352,2.58e-34,1;UBERON:0005904,4.28e-34,4;UBERON:0000941,7.06e-34,1;UBERON:0001785,7.06e-34,1;UBERON:0002464,7.06e-34,1;UBERON:0004904,7.06e-34,1;UBERON:0001021,7.06e-34,1;UBERON:0003902,7.06e-34,1;UBERON:0005425,7.06e-34,1;UBERON:0003714,1.07e-17,2;UBERON:0005162,1.07e-17,2;UBERON:0000122,1.07e-17,2;UBERON:0003135,4.00e-13,11;UBERON:0001781,1.57e-09,4;UBERON:0000058,5.16e-08,19;UBERON:0001872,6.55e-08,5;UBERON:0002021,7.49e-08,5;UBERON:0007023,1.12e-07,114;UBERON:0001950,3.05e-07,20;UBERON:0003101,4.79e-07,22;UBERON:0000079,4.79e-07,22;UBERON:0000966,8.97e-07,6;UBERON:0005388,8.97e-07,6;UBERON:0001802,8.97e-07,6 | |||
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|short_description=p1@WFDC10A | |||
}} | }} |
Latest revision as of 12:13, 16 September 2015
Short description: | p1@WFDC10A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_WFDC10A_5end |
Coexpression cluster: | C39_epididymis_ductus_seminal_testis_acute_thyroid_CD133 |
Association with transcript: | 0bp_to_NM_080753, uc002xoz.2_5end |
EntrezGene: | WFDC10A |
HGNC: | 16139 |
UniProt: | Q9H1F0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 5.00e-45 | 3 |
internal male genitalia | 5.00e-45 | 3 |
epididymis | 1.84e-34 | 1 |
vas deferens | 2.58e-34 | 1 |
spermatic cord | 2.58e-34 | 1 |
duct of male reproductive system | 4.28e-34 | 4 |
cranial nerve II | 7.06e-34 | 1 |
cranial nerve | 7.06e-34 | 1 |
nerve trunk | 7.06e-34 | 1 |
nerve connecting eye with brain | 7.06e-34 | 1 |
nerve | 7.06e-34 | 1 |
retinal neural layer | 7.06e-34 | 1 |
presumptive neural retina | 7.06e-34 | 1 |
neural tissue | 1.07e-17 | 2 |
multi cell component structure | 1.07e-17 | 2 |
neuron projection bundle | 1.07e-17 | 2 |
male reproductive organ | 4.00e-13 | 11 |
layer of retina | 1.57e-09 | 4 |
duct | 5.16e-08 | 19 |
parietal lobe | 6.55e-08 | 5 |
occipital lobe | 7.49e-08 | 5 |
adult organism | 1.12e-07 | 114 |
neocortex | 3.05e-07 | 20 |
male organism | 4.79e-07 | 22 |
male reproductive system | 4.79e-07 | 22 |
retina | 8.97e-07 | 6 |
photoreceptor array | 8.97e-07 | 6 |
posterior segment of eyeball | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.32e-09 | 4 |
breast cancer | 1.32e-09 | 4 |